Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002611g0090 Nicotiana tabacum HOM05D002194 ORTHO05D010880 1.8e-34 148.7 73 100.0
SalBow1G3226 Salvia bowleyana HOM05D002194 ORTHO05D010880 1.5e-20 102.4 74 73.0
Lalb_Chr23g0274491 Lupinus albus HOM05D002194 ORTHO05D010880 1.4e-18 95.9 51 96.1
Medtr4g050850 Medicago truncatula HOM05D002194 ORTHO05D002840 1.4e-18 95.9 51 96.1
ClCG02G011250 Citrullus lanatus HOM05D002194 ORTHO05D010880 6.8e-18 93.6 51 94.1
ClCG06G017240 Citrullus lanatus HOM05D002194 ORTHO05D010880 1.5e-17 92.4 51 92.2
ClCG00G004310 Citrullus lanatus HOM05D002194 ORTHO05D010880 9.8e-17 89.7 51 92.2
arahy.Tifrunner.gnm1.ann1.P1LA7E Arachis hypogaea HOM05D002194 ORTHO05D002840 1.4e-15 85.9 57 82.5
Nitab4.5_0001783g0080 Nicotiana tabacum HOM05D002194 ORTHO05D002840 4.1e-15 84.3 50 82.0
Lsat_1_v5_gn_1_27981 Lactuca sativa HOM05D002194 ORTHO05D002840 5.4e-15 84.0 55 80.0
Lsat_1_v5_gn_1_38741 Lactuca sativa HOM05D002194 ORTHO05D002840 5.4e-15 84.0 55 80.0
Lsat_1_v5_gn_2_43901 Lactuca sativa HOM05D002194 ORTHO05D002840 5.4e-15 84.0 55 80.0
Lsat_1_v5_gn_9_50921 Lactuca sativa HOM05D002194 ORTHO05D002840 5.4e-15 84.0 55 80.0
Nitab4.5_0000172g0320 Nicotiana tabacum HOM05D002194 ORTHO05D002840 7.0e-15 83.6 71 66.2
LjContig00318g0008472 Lotus japonicus HOM05D002194 ORTHO05D002840 6.6e-13 77.0 58 74.1
MBI04_g06628_MAGBIO Magnolia biondii HOM05D002194 ORTHO05D002840 8.6e-13 76.6 51 80.4
Gohir.D11G308550 Gossypium hirsutum HOM05D002194 ORTHO05D010880 1.1e-12 76.3 58 72.4
MBI05_g40996_MAGBIO Magnolia biondii HOM05D002194 ORTHO05D002840 2.5e-12 75.1 51 80.4
Nitab4.5_0000959g0050 Nicotiana tabacum HOM05D002194 ORTHO05D002840 2.5e-12 75.1 43 83.7
Gohir.A01G150018 Gossypium hirsutum HOM05D002194 ORTHO05D010880 4.3e-12 74.3 40 92.5
BolSC29t60470H Brassica oleracea HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BolSC29t60593H Brassica oleracea HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BolSC35t60746H Brassica oleracea HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BolSC46t61004H Brassica oleracea HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BolSC46t61031H Brassica oleracea HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BolSC47t61093H Brassica oleracea HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BolSC49t61179H Brassica oleracea HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BraA06t25419Z Brassica rapa HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BraSC103t45462Z Brassica rapa HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BraSC103t45470Z Brassica rapa HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BraSC138t45572Z Brassica rapa HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BraSC25t45862Z Brassica rapa HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BraSC58t46424Z Brassica rapa HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
BraSC59t46587Z Brassica rapa HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
Gohir.1Z050080 Gossypium hirsutum HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
Gohir.A05G086232 Gossypium hirsutum HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
Gohir.D01G101917 Gossypium hirsutum HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
Gohir.D11G239900 Gossypium hirsutum HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
Os03g0667201 Oryza sativa ssp. japonica HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
PSO548G0107 Papaver somniferum HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
Potri.013G162100 Populus trichocarpa HOM05D002194 ORTHO05D010880 7.3e-12 73.6 38 97.4
Gorai.007G008800 Gossypium raimondii HOM05D002194 ORTHO05D010880 9.5e-12 73.2 40 92.5
Gorai.007G253400 Gossypium raimondii HOM05D002194 ORTHO05D010880 2.1e-11 72.0 38 94.7
ATCG00560 Arabidopsis thaliana HOM05D002194 ORTHO05D010880 2.8e-11 71.6 38 94.7
DCAR_032499 Daucus carota HOM05D002194 ORTHO05D010880 2.8e-11 71.6 38 94.7
AL2G21580 Arabidopsis lyrata HOM05D002194 ORTHO05D002840 3.6e-11 71.2 40 90.0
Nitab4.5_0001127g0300 Nicotiana tabacum HOM05D002194 ORTHO05D002840 3.6e-11 71.2 38 92.1
Peaxi162Scf00225g00087 Petunia axillaris HOM05D002194 ORTHO05D010880 8.0e-11 70.1 39 87.2
Gohir.D06G105440 Gossypium hirsutum HOM05D002194 ORTHO05D010880 1.4e-10 69.3 38 92.1
Nitab4.5_0000172g1660 Nicotiana tabacum HOM05D002194 ORTHO05D010880 1.8e-10 68.9 40 80.0
Nitab4.5_0001379g0060 Nicotiana tabacum HOM05D002194 ORTHO05D010880 1.8e-10 68.9 38 86.8
Nitab4.5_0011882g0070 Nicotiana tabacum HOM05D002194 ORTHO05D010880 1.8e-10 68.9 40 80.0
Nitab4.5_0001170g0120 Nicotiana tabacum HOM05D002194 ORTHO05D002840 8.9e-10 66.6 40 77.5
Gohir.D01G028900 Gossypium hirsutum HOM05D002194 ORTHO05D010880 3.4e-09 64.7 37 86.5
CAN.G841.3 Capsicum annuum HOM05D002194 ORTHO05D010880 5.8e-09 63.9 38 86.8
arahy.Tifrunner.gnm1.ann1.U2P2B1 Arachis hypogaea HOM05D002194 ORTHO05D010880 7.5e-09 63.5 32 93.8
Peaxi162Scf00413g00830 Petunia axillaris HOM05D002194 ORTHO05D010880 1.7e-08 62.4 33 84.8
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 7.0e-07 57.0 29 93.1
Hund19835 Selenicereus undatus HOM05D002194 ORTHO05D010880 1.6e-06 55.8 66 50.0


User provided reference genes

Program Settings