Gene: Lsat_1_v5_gn_1_38741
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_1_38741
- Transcript Identifier Lsat_1_v5_gn_1_38741.2
- Gene Type Coding gene
- Location Lsat_1_v8_lg_1 : 44410041-44410842 : negative
Gene Family Information
- ID HOM05D002194
- #Genes/#Species 306/58
- Phylogenetic origin
- ID ORTHO05D002840
- #Genes/#Species 258/57
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_1_38741.v5
- pacid 38945221
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015979 | IEA | InterPro | photosynthesis | |
| GO:0009767 | IEA | InterPro | photosynthetic electron transport chain | |
| GO:0019684 | IEA | InterPro | photosynthesis, light reaction | |
| GO:0009769 | ISO | PLAZA Integrative Orthology | photosynthesis, light harvesting in photosystem II | ATCG00580 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0020037 | IEA | InterPro | heme binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0009055 | ISO | PLAZA Integrative Orthology | electron transfer activity | ATCG00580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009523 | IEA | InterPro | photosystem II | |
| GO:0009539 | IEA | InterPro | photosystem II reaction center | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0009654 | ISO | PLAZA Integrative Orthology | photosystem II oxygen evolving complex | ATCG00580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003372 | Photosystem II PsbL |
| IPR013081 | Photosystem II cytochrome b559, N-terminal |
| IPR037025 | Photosystem II cytochrome b559, alpha subunit superfamily |
| IPR006217 | Photosystem II cytochrome b559, alpha subunit |
| IPR037266 | Photosystem II PsbL superfamily |
| IPR013082 | Photosystem II cytochrome b559, alpha subunit, lumenal region |
| Mapman id | Description |
|---|---|
| 1.1.1.2.1.5.1 | Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.cytochrome b559 heterodimer.component alpha/PsbE |