Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 7.6e-250 866.7 432 100.0
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 5.2e-243 844.0 455 93.0
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 5.4e-232 807.4 432 92.1
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 2.1e-231 805.4 432 92.1
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.9e-231 803.5 432 91.7
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 9.0e-227 790.0 434 90.8
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 3.2e-208 728.4 433 85.2
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 3.8e-193 678.3 435 76.1
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.5e-192 675.6 433 75.8
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.1e-191 672.5 433 75.5
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 8.0e-191 670.6 433 76.0
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 8.0e-191 670.6 448 74.1
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 7.0e-187 657.5 417 75.5
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 2.2e-185 652.5 440 72.5
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.2e-183 646.7 437 72.5
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.6e-183 646.4 433 73.2
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 6.1e-183 644.4 420 75.2
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.3e-182 642.5 431 71.5
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 2.3e-182 642.5 425 74.1
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 6.7e-182 641.0 431 71.5
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.2e-181 640.2 423 73.5
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.2e-181 640.2 419 74.7
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.2e-181 640.2 421 74.3
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 7.5e-181 637.5 423 73.8
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 1.3e-180 636.7 419 74.2
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 3.7e-180 635.2 431 72.9
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 4.8e-180 634.8 449 71.0
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 6.3e-180 634.4 423 74.0
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 6.3e-180 634.4 419 73.3
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 8.3e-180 634.0 422 73.2
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.1e-179 633.6 435 70.8
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 1.4e-179 633.3 453 68.9
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.8e-179 632.9 420 73.6
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 2.4e-179 632.5 423 73.0
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 4.1e-179 631.7 420 73.6
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 9.1e-179 630.6 423 72.3
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 4.5e-178 628.2 430 69.8
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.0e-177 627.1 422 72.5
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 8.5e-177 624.0 423 69.7
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 8.5e-177 624.0 430 70.7
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 8.5e-177 624.0 422 72.3
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 5.5e-176 621.3 421 71.7
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 9.4e-176 620.5 431 69.8
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.1e-175 619.4 423 70.9
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 3.6e-175 618.6 431 70.1
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.4e-174 616.7 431 69.8
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.3e-174 615.9 422 71.8
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.3e-174 615.9 422 71.8
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 3.0e-174 615.5 422 70.1
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 2.6e-173 612.5 419 72.1
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 4.4e-173 611.7 432 68.8
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 5.7e-173 611.3 432 68.5
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 9.8e-173 610.5 422 69.9
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 6.3e-172 607.8 420 70.7
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 6.3e-172 607.8 420 70.7
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 1.1e-171 607.1 423 70.2
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.4e-171 606.7 421 69.8
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 5.4e-171 604.7 419 68.5
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 5.4e-171 604.7 423 68.8
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 9.1e-171 604.0 421 69.1
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 9.1e-171 604.0 422 70.4
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 9.1e-171 604.0 419 69.5
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.2e-170 603.6 413 71.2
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.2e-170 603.6 433 68.6
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 2.0e-170 602.8 424 69.6
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 3.5e-170 602.1 419 70.4
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.0e-169 600.5 434 68.7
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.3e-169 600.1 419 70.9
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 2.3e-169 599.4 424 69.8
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 2.9e-169 599.0 424 69.8
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 3.8e-169 598.6 424 69.6
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 5.0e-169 598.2 424 69.8
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 1.1e-168 597.0 423 68.6
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.5e-168 596.7 424 69.8
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.5e-168 596.7 422 68.7
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 3.3e-168 595.5 423 68.8
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 3.3e-168 595.5 541 59.3
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 4.2e-168 595.1 423 69.7
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 4.2e-168 595.1 425 67.8
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 7.2e-168 594.3 434 68.2
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 9.5e-168 594.0 423 68.8
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.6e-167 593.2 420 67.4
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.8e-167 592.4 421 67.5
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 1.0e-166 590.5 423 68.3
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 8.9e-166 587.4 482 62.0
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.2e-165 587.0 424 68.2
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.4e-165 585.5 423 67.1
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 1.3e-164 583.6 424 66.5
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.4e-163 579.3 427 67.2
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 4.1e-163 578.6 427 67.0
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 5.4e-163 578.2 433 67.0
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 5.4e-163 578.2 422 67.5
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.0e-161 573.9 421 66.5
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 5.0e-161 571.6 419 64.0
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.5e-160 570.1 421 66.0
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.6e-159 566.6 421 65.6
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.1e-159 566.2 421 65.8
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 3.2e-155 552.4 354 74.3
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 4.1e-155 552.0 415 65.1
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.2e-154 550.4 423 63.4
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.7e-153 546.6 427 63.0
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.9e-153 545.4 419 61.1
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 7.5e-141 504.6 430 56.7
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.1e-139 500.7 420 56.7
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 5.4e-139 498.4 434 59.9
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.6e-138 496.9 335 73.4
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 6.0e-138 495.0 418 59.8
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 4.4e-133 478.8 424 55.4
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 5.8e-133 478.4 421 54.9
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 5.8e-125 451.8 302 73.8
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.7e-121 440.3 425 50.8
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.1e-120 437.6 350 63.4
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.1e-118 431.0 271 76.0
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 2.4e-118 429.9 430 55.1
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 9.6e-112 407.9 421 52.0
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 4.8e-111 405.6 265 73.2
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 3.4e-85 319.7 422 43.1
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 4.2e-83 312.8 195 76.9
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 1.0e-76 291.6 235 59.1
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.3e-73 280.4 182 73.1
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 2.9e-68 263.5 291 50.2
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.2e-50 204.9 136 73.5
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 4.1e-46 189.9 103 90.3
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 6.4e-31 139.4 87 78.2
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 8.3e-31 139.0 91 69.2
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 4.1e-30 136.7 91 67.0
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.1e-11 75.5 356 23.6
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 8.1e-10 69.3 91 45.1
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 3.1e-09 67.4 41 68.3


User provided reference genes

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