Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002475g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 6.6e-70 267.3 140 100.0
Nitab4.5_0000313g0040 Nicotiana tabacum HOM05D004382 ORTHO05D005181 2.2e-65 252.3 140 96.4
PGSC0003DMG400022241 Solanum tuberosum HOM05D004382 ORTHO05D005181 2.0e-63 245.7 140 91.4
Solyc07g066310.3 Solanum lycopersicum HOM05D004382 ORTHO05D005181 7.8e-63 243.8 140 90.7
Sopen07g034490 Solanum pennellii HOM05D004382 ORTHO05D005181 7.8e-63 243.8 140 90.7
Peaxi162Scf00232g01129 Petunia axillaris HOM05D004382 ORTHO05D005181 1.3e-62 243.0 140 89.3
CANSAT56G1367 Cannabis sativa HOM05D004382 ORTHO05D005181 9.5e-61 236.9 140 84.3
CAN.G943.25 Capsicum annuum HOM05D004382 ORTHO05D005181 1.5e-58 229.6 140 88.6
Peaxi162Scf00006g00149 Petunia axillaris HOM05D004382 ORTHO05D005181 1.5e-58 229.6 141 85.8
Cc05_g15930 Coffea canephora HOM05D004382 ORTHO05D005181 2.0e-58 229.2 140 85.0
TWI38G0625 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 2.0e-58 229.2 140 85.0
Glyma.08G173700 Glycine max HOM05D004382 ORTHO05D005181 3.4e-58 228.4 140 82.1
Oeu002809.1 Olea europaea HOM05D004382 ORTHO05D005181 3.4e-58 228.4 140 83.6
Actinidia37109 Actinidia chinensis HOM05D004382 ORTHO05D005181 5.8e-58 227.6 142 83.1
SGA_v2.0_scaffold49G18168 Striga asiatica HOM05D004382 ORTHO05D005181 5.8e-58 227.6 140 83.6
CiPaw.11G067100 Carya illinoinensis HOM05D004382 ORTHO05D005181 1.7e-57 226.1 140 81.4
PGR142G2616 Punica granatum HOM05D004382 ORTHO05D005181 3.7e-57 224.9 140 82.1
Sed0014118 Sechium edule HOM05D004382 ORTHO05D005181 3.7e-57 224.9 140 82.9
GSVIVG01020484001 Vitis vinifera HOM05D004382 ORTHO05D005181 3.7e-57 224.9 140 82.1
Gohir.D05G330700 Gossypium hirsutum HOM05D004382 ORTHO05D005181 4.9e-57 224.6 139 83.5
Gorai.009G354500 Gossypium raimondii HOM05D004382 ORTHO05D005181 4.9e-57 224.6 139 83.5
Phvul.005G055200 Phaseolus vulgaris HOM05D004382 ORTHO05D005181 4.9e-57 224.6 140 80.7
TWI38G0568 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 6.4e-57 224.2 140 82.1
VMungo1080G1647 Vigna mungo HOM05D004382 ORTHO05D005181 8.3e-57 223.8 140 80.0
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea HOM05D004382 ORTHO05D005181 1.1e-56 223.4 140 79.3
Nitab4.5_0000134g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.1e-56 223.4 137 84.7
Prupe.4G143700 Prunus persica HOM05D004382 ORTHO05D005181 1.1e-56 223.4 140 80.0
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea HOM05D004382 ORTHO05D005181 1.4e-56 223.0 140 79.3
Glyma.15G253700 Glycine max HOM05D004382 ORTHO05D005181 1.4e-56 223.0 140 81.4
Gohir.A04G050200 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.4e-56 223.0 139 82.0
Lj3g0019499 Lotus japonicus HOM05D004382 ORTHO05D005181 2.4e-56 222.2 140 79.3
ClCG07G010700 Citrullus lanatus HOM05D004382 ORTHO05D005181 3.2e-56 221.9 140 81.4
Migut.H01700 Erythranthe guttata HOM05D004382 ORTHO05D005181 3.2e-56 221.9 140 80.0
Sabra11G0127600 Salix brachista HOM05D004382 ORTHO05D005181 3.2e-56 221.9 140 79.3
AUR62004366 Chenopodium quinoa HOM05D004382 ORTHO05D005181 4.1e-56 221.5 141 80.1
CSS0001445 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 7.1e-56 220.7 139 84.2
MSTRG.7052 Avicennia marina HOM05D004382 ORTHO05D005181 9.2e-56 220.3 141 80.9
FvH4_3g16050 Fragaria vesca HOM05D004382 ORTHO05D005181 9.2e-56 220.3 140 80.0
FAN11G1612 Fragaria x ananassa HOM05D004382 ORTHO05D005181 9.2e-56 220.3 140 80.0
FAN25G3309 Fragaria x ananassa HOM05D004382 ORTHO05D005181 9.2e-56 220.3 140 79.3
CsaV3_4G007600 Cucumis sativus L. HOM05D004382 ORTHO05D005181 1.2e-55 219.9 140 81.4
Sed0025739 Sechium edule HOM05D004382 ORTHO05D005181 2.7e-55 218.8 140 80.0
MD05G1215200 Malus domestica HOM05D004382 ORTHO05D005181 3.5e-55 218.4 139 79.9
SalBow8G0430 Salvia bowleyana HOM05D004382 ORTHO05D005181 4.6e-55 218.0 140 80.0
AUR62022575 Chenopodium quinoa HOM05D004382 ORTHO05D005181 6.0e-55 217.6 141 78.0
CSS0016237 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 1.0e-54 216.9 137 82.5
FAN21G1818 Fragaria x ananassa HOM05D004382 ORTHO05D005181 1.0e-54 216.9 140 77.9
Oeu003841.1 Olea europaea HOM05D004382 ORTHO05D005181 2.3e-54 215.7 142 80.3
CARHR072720 Cardamine hirsuta HOM05D004382 ORTHO05D005181 3.0e-54 215.3 141 79.4
unitig_8.g4771 Utricularia gibba HOM05D004382 ORTHO05D005181 3.0e-54 215.3 140 78.6
A07p44190 Brassica napus HOM05D004382 ORTHO05D005181 5.1e-54 214.5 139 77.7
BraA07t31927Z Brassica rapa HOM05D004382 ORTHO05D005181 5.1e-54 214.5 139 77.7
MD10G1198300 Malus domestica HOM05D004382 ORTHO05D005181 6.6e-54 214.2 139 77.7
Potri.001G438700 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.1e-53 213.4 140 75.7
AT1G79040 Arabidopsis thaliana HOM05D004382 ORTHO05D005181 1.5e-53 213.0 139 77.7
BcaB02g08662 Brassica carinata HOM05D004382 ORTHO05D005181 1.5e-53 213.0 139 77.0
Carub.0002s2591 Capsella rubella HOM05D004382 ORTHO05D005181 1.5e-53 213.0 139 77.7
A07p27340 Brassica napus HOM05D004382 ORTHO05D005181 1.9e-53 212.6 140 78.6
BraA07t30375Z Brassica rapa HOM05D004382 ORTHO05D005181 1.9e-53 212.6 140 78.6
ClCG11G016280 Citrullus lanatus HOM05D004382 ORTHO05D005181 2.5e-53 212.2 138 76.8
Ah.08g216320 Amaranthus hybridus HOM05D004382 ORTHO05D005181 3.3e-53 211.8 140 77.9
BcaC08g47468 Brassica carinata HOM05D004382 ORTHO05D005181 3.3e-53 211.8 139 76.3
C06p52920 Brassica napus HOM05D004382 ORTHO05D005181 3.3e-53 211.8 139 76.3
BolC6t40310H Brassica oleracea HOM05D004382 ORTHO05D005181 3.3e-53 211.8 139 76.3
Nn3g20146 Nelumbo nucifera HOM05D002089 ORTHO05D011346 4.3e-53 211.5 138 79.0
BcaB02g07194 Brassica carinata HOM05D004382 ORTHO05D005181 5.6e-53 211.1 140 77.9
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 5.6e-53 211.1 141 79.4
HanXRQChr08g0232801 Helianthus annuus HOM05D004382 ORTHO05D005181 7.3e-53 210.7 140 79.3
QL04p074767 Quercus lobata HOM05D004382 ORTHO05D005181 7.3e-53 210.7 139 77.0
RcHm_v2.0_Chr5g0027021 Rosa chinensis HOM05D004382 ORTHO05D005181 7.3e-53 210.7 140 76.4
Aa31LG4G1950 Aethionema arabicum HOM05D004382 ORTHO05D005181 1.2e-52 209.9 140 76.4
EL10Ac4g08547 Beta vulgaris HOM05D004382 ORTHO05D005181 1.2e-52 209.9 141 78.7
Thhalv10019302m.g Eutrema salsugineum HOM05D004382 ORTHO05D005181 1.2e-52 209.9 140 76.4
C06p30200 Brassica napus HOM05D004382 ORTHO05D005181 2.1e-52 209.1 140 77.1
BolC6t38183H Brassica oleracea HOM05D004382 ORTHO05D005181 2.1e-52 209.1 140 77.1
Potri.011G142200 Populus trichocarpa HOM05D004382 ORTHO05D005181 2.1e-52 209.1 140 74.3
BcaB05g25168 Brassica carinata HOM05D004382 ORTHO05D005181 2.8e-52 208.8 140 76.4
BcaC08g45389 Brassica carinata HOM05D004382 ORTHO05D005181 2.8e-52 208.8 140 77.1
BcaC03g15860 Brassica carinata HOM05D004382 ORTHO05D005181 3.6e-52 208.4 139 76.3
A02p22470 Brassica napus HOM05D004382 ORTHO05D005181 3.6e-52 208.4 139 76.3
C02p36150 Brassica napus HOM05D004382 ORTHO05D005181 3.6e-52 208.4 139 76.3
BolC2t09629H Brassica oleracea HOM05D004382 ORTHO05D005181 3.6e-52 208.4 139 76.3
BraA02t07252Z Brassica rapa HOM05D004382 ORTHO05D005181 3.6e-52 208.4 139 76.3
Sp5g34090 Schrenkiella parvula HOM05D004382 ORTHO05D005181 3.6e-52 208.4 140 75.0
ECA236G0888 Erigeron canadensis HOM05D004382 ORTHO05D005181 4.7e-52 208.0 140 75.0
Nitab4.5_0001791g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 4.7e-52 208.0 140 80.0
Sc16g0003480 Simmondsia chinensis HOM05D004382 ORTHO05D005181 4.7e-52 208.0 139 78.4
Thecc.07G156900 Theobroma cacao HOM05D004382 ORTHO05D005181 4.7e-52 208.0 140 78.6
COL.COLO4_05073 Corchorus olitorius HOM05D004382 ORTHO05D005181 1.1e-51 206.8 140 77.1
Lalb_Chr01g0015971 Lupinus albus HOM05D004382 ORTHO05D005181 1.1e-51 206.8 134 79.1
HanXRQChr05g0160651 Helianthus annuus HOM05D004382 ORTHO05D005181 2.3e-51 205.7 140 77.1
Aqoxy1G01569 Aquilegia oxysepala HOM05D004382 ORTHO05D005181 5.2e-51 204.5 141 74.5
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 5.2e-51 204.5 141 76.6
Ciclev10022793m.g Citrus clementina HOM05D004382 ORTHO05D005181 8.9e-51 203.8 139 77.0
Manes.15G102500 Manihot esculenta HOM05D004382 ORTHO05D005181 8.9e-51 203.8 142 76.1
Duzib187G1376 Durio zibethinus HOM05D004382 ORTHO05D005181 1.2e-50 203.4 139 77.0
Medtr2g064650 Medicago truncatula HOM05D004382 ORTHO05D005181 1.2e-50 203.4 140 75.0
Ca_03704_v3 Cicer arietinum L. HOM05D004382 ORTHO05D005181 1.5e-50 203.0 140 74.3
TPR.G10344 Trifolium pratense HOM05D004382 ORTHO05D005181 3.4e-50 201.8 140 74.3
MSTRG.14535 Avicennia marina HOM05D004382 ORTHO05D005181 4.4e-50 201.4 141 76.6
SalBow5G1313 Salvia bowleyana HOM05D004382 ORTHO05D005181 5.8e-50 201.1 141 76.6
SalBow5G2519 Salvia bowleyana HOM05D004382 ORTHO05D005181 5.8e-50 201.1 141 76.6
Psat1g002320 Pisum sativum HOM05D004382 ORTHO05D005181 9.9e-50 200.3 140 73.6
Potri.001G438800 Populus trichocarpa HOM05D004382 ORTHO05D005181 9.9e-50 200.3 140 75.0
Lalb_Chr25g0285191 Lupinus albus HOM05D004382 ORTHO05D005181 1.7e-49 199.5 135 74.8
Lalb_Chr03g0031561 Lupinus albus HOM05D004382 ORTHO05D005181 2.9e-49 198.7 143 70.6
Atru.chr2.1854 Acer truncatum HOM05D004382 ORTHO05D005181 6.4e-49 197.6 139 77.7
AL2G39500 Arabidopsis lyrata HOM05D004382 ORTHO05D005181 6.4e-49 197.6 131 75.6
Gorai.002G032900 Gossypium raimondii HOM05D004382 ORTHO05D005181 6.4e-49 197.6 145 74.5
ATR1098G153 Amborella trichopoda HOM05D004382 ORTHO05D005181 1.1e-48 196.8 139 74.1
DCAR_013749 Daucus carota HOM05D004382 ORTHO05D005181 1.9e-48 196.1 140 75.0
Hund10309 Selenicereus undatus HOM05D004382 ORTHO05D005181 4.1e-48 194.9 140 73.6
Sed0016780 Sechium edule HOM05D004382 ORTHO05D005181 5.4e-48 194.5 136 75.0
TAR627G0744 Trochodendron aralioides HOM05D004382 ORTHO05D005181 5.4e-48 194.5 135 76.3
vmacro09788 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 7.1e-48 194.1 142 74.6
DCAR_009633 Daucus carota HOM05D004382 ORTHO05D005181 1.2e-47 193.4 142 73.2
Eucgr.F01447 Eucalyptus grandis HOM05D004382 ORTHO05D005181 1.2e-47 193.4 156 69.2
Gohir.A01G037100 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.7e-47 192.2 144 71.5
Rhsim04G0006200 Rhododendron simsii HOM05D004382 ORTHO05D005181 3.5e-47 191.8 139 74.8
Potri.011G142300 Populus trichocarpa HOM05D004382 ORTHO05D005181 6.0e-47 191.0 139 73.4
DCAR_016816 Daucus carota HOM05D004382 ORTHO05D005181 7.8e-47 190.7 140 73.6
MBI02_g25371_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 7.8e-47 190.7 141 75.2
PSO541G3267 Papaver somniferum HOM05D004382 ORTHO05D005181 1.3e-46 189.9 140 72.1
PSO675G7775 Papaver somniferum HOM05D004382 ORTHO05D005181 1.3e-46 189.9 140 72.1
Solyc12g017250.2 Solanum lycopersicum HOM05D004382 ORTHO05D005181 1.3e-46 189.9 137 73.0
Sopen12g008070 Solanum pennellii HOM05D004382 ORTHO05D005181 2.3e-46 189.1 137 73.7
THA.LOC104812349 Tarenaya hassleriana HOM05D004382 ORTHO05D005181 3.9e-46 188.3 141 73.8
CDE04G0985 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 5.1e-46 188.0 140 70.7
Manes.03G082900 Manihot esculenta HOM05D004382 ORTHO05D005181 6.6e-46 187.6 141 73.8
CDE12G0390 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 2.5e-45 185.7 140 69.3
HPP92_016563 Vanilla planifolia HOM05D004382 ORTHO05D005181 1.6e-44 183.0 140 70.7
CDE11G0376 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 3.4e-42 175.3 140 67.1
Eucgr.F03186 Eucalyptus grandis HOM05D004382 ORTHO05D005181 9.9e-42 173.7 109 74.3
Lsat_1_v5_gn_7_116120 Lactuca sativa HOM05D004382 ORTHO05D005181 2.9e-41 172.2 140 66.4
Os08g0200300 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 6.4e-41 171.0 138 65.2
Zm00001eb171230 Zea mays HOM05D004382 ORTHO05D005181 5.4e-40 167.9 138 67.4
vmacro11652 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 6.0e-39 164.5 153 64.1
Rhsim06G0237200 Rhododendron simsii HOM05D006828 ORTHO05D008312 1.3e-38 163.3 91 87.9
Sabra16G0296700 Salix brachista HOM05D004382 ORTHO05D005181 6.6e-38 161.0 159 60.4
Os07g0147550 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 1.1e-37 160.2 141 61.0
Sabra11G0127700 Salix brachista HOM05D004382 ORTHO05D005181 3.3e-37 158.7 140 62.9
Dinv19628 Davidia involucrata HOM05D006828 ORTHO05D008312 1.1e-35 153.7 88 85.2
MBI18_g37150_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 5.3e-35 151.4 140 60.7
Os07g0147500 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 1.5e-34 149.8 139 56.8
Gohir.D01G024400 Gossypium hirsutum HOM05D004382 ORTHO05D005181 3.4e-34 148.7 115 69.6
SEGI_14655 Sequoiadendron giganteum HOM05D004382 ORTHO05D005181 7.6e-34 147.5 134 56.7
Mapoly0001s0109 Marchantia polymorpha HOM05D004382 ORTHO05D005181 1.7e-33 146.4 147 57.1
PGSC0003DMG400002312 Solanum tuberosum HOM05D004382 ORTHO05D005181 6.4e-33 144.4 137 62.8
MELO3C016181.2 Cucumis melo HOM05D004382 ORTHO05D005181 8.4e-33 144.1 90 82.2
SMO134G0197 Selaginella moellendorffii HOM05D004382 ORTHO05D005181 4.2e-32 141.7 119 60.5
Pp3c27_2340 Physcomitrium patens HOM05D004382 ORTHO05D005181 3.9e-30 135.2 140 56.4
Cpa.g.c37194 Carica papaya HOM05D004382 ORTHO05D005181 1.1e-29 133.7 90 81.1
Pp3c16_5650 Physcomitrium patens HOM05D004382 ORTHO05D005181 7.4e-29 131.0 147 53.7
Mapoly0006s0055 Marchantia polymorpha HOM05D004382 ORTHO05D005181 9.6e-29 130.6 148 51.4
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis HOM05D004382 ORTHO05D005181 1.3e-28 130.2 140 51.4
Pp3c27_2320 Physcomitrium patens HOM05D004382 ORTHO05D005181 8.1e-28 127.5 138 56.5
Pp3c5_4230 Physcomitrium patens HOM05D004382 ORTHO05D005181 8.1e-28 127.5 141 53.2
PGR083G0343 Punica granatum HOM05D004382 ORTHO05D005181 1.9e-24 116.3 82 70.7
Cpa.g.c38697 Carica papaya HOM05D004382 ORTHO05D005181 5.1e-22 108.2 53 94.3
CBR_g30109 Chara braunii HOM05D000004 ORTHO05D000002 3.7e-20 102.1 67 70.1
PRCOL_00003342 Prasinoderma coloniale HOM05D004382 ORTHO05D005181 1.1e-19 100.5 138 41.3
Haze_08525 Corylus avellana HOM05D004382 ORTHO05D005181 1.8e-19 99.8 139 46.8
Cre06.g261000 Chlamydomonas reinhardtii HOM05D004382 ORTHO05D005181 1.9e-16 89.7 80 57.5
Atru.chr6.732 Acer truncatum HOM05D004382 ORTHO05D005181 3.2e-16 89.0 79 65.8
TAR626G0945 Trochodendron aralioides HOM05D004382 ORTHO05D005181 7.1e-16 87.8 74 66.2
TPR.G25891 Trifolium pratense HOM05D004382 ORTHO05D005181 1.2e-07 60.5 136 37.5


User provided reference genes

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