Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002420g0030 Nicotiana tabacum HOM05D007200 ORTHO05D009030 1.4e-159 566.2 284 100.0
Nitab4.5_0009303g0010 Nicotiana tabacum HOM05D007200 ORTHO05D009030 1.0e-141 506.9 282 91.1
Peaxi162Scf00071g00636 Petunia axillaris HOM05D007200 ORTHO05D009030 6.7e-130 467.6 286 83.6
PGSC0003DMG400007427 Solanum tuberosum HOM05D007200 ORTHO05D009030 1.7e-117 426.4 306 73.5
CAN.G321.37 Capsicum annuum HOM05D007200 ORTHO05D009030 5.7e-113 411.4 248 83.5
Solyc11g008480.2 Solanum lycopersicum HOM05D007200 ORTHO05D009030 1.7e-112 409.8 307 70.4
Sopen11g004260 Solanum pennellii HOM05D007200 ORTHO05D009030 1.1e-111 407.1 263 78.3
Manes.08G119500 Manihot esculenta HOM05D007200 ORTHO05D009030 4.7e-107 391.7 286 68.2
Ciclev10002020m.g Citrus clementina HOM05D007200 ORTHO05D009030 6.8e-106 387.9 298 64.8
GSVIVG01031113001 Vitis vinifera HOM05D007200 ORTHO05D009030 4.4e-105 385.2 274 69.7
FvH4_6g06280 Fragaria vesca HOM05D007200 ORTHO05D009030 9.8e-105 384.0 295 66.4
FAN14G1797 Fragaria x ananassa HOM05D007200 ORTHO05D009030 1.7e-104 383.3 295 66.4
Nn3g21404 Nelumbo nucifera HOM05D007200 ORTHO05D009030 2.8e-104 382.5 292 65.8
RcHm_v2.0_Chr3g0455321 Rosa chinensis HOM05D007200 ORTHO05D009030 2.8e-104 382.5 293 65.5
MD12G1216700 Malus domestica HOM05D007200 ORTHO05D009030 3.7e-104 382.1 298 65.8
CSS0011307 Camellia sinensis var. sinensis HOM05D007200 ORTHO05D009030 1.1e-103 380.6 289 66.1
Duzib177G0869 Durio zibethinus HOM05D007200 ORTHO05D009030 1.1e-103 380.6 292 65.4
TAR365G0906 Trochodendron aralioides HOM05D007200 ORTHO05D009030 1.1e-103 380.6 282 66.0
Actinidia24645 Actinidia chinensis HOM05D007200 ORTHO05D009030 1.4e-103 380.2 288 66.0
FAN09G0829 Fragaria x ananassa HOM05D007200 ORTHO05D009030 1.8e-103 379.8 295 65.1
Thecc.05G310900 Theobroma cacao HOM05D007200 ORTHO05D009030 1.8e-103 379.8 292 65.8
TAR365G0308 Trochodendron aralioides HOM05D007200 ORTHO05D009030 2.4e-103 379.4 282 65.6
CANSAT54G2021 Cannabis sativa HOM05D007200 ORTHO05D009030 5.4e-103 378.3 284 66.9
DCAR_001939 Daucus carota HOM05D007200 ORTHO05D009030 3.5e-102 375.6 287 65.5
VMungo0720G1786 Vigna mungo HOM05D007200 ORTHO05D009030 1.0e-101 374.0 247 73.7
TWI12G0470 Tripterygium wilfordii HOM05D007200 ORTHO05D009030 1.3e-101 373.6 291 65.3
ECA236G3394 Erigeron canadensis HOM05D007200 ORTHO05D009030 1.7e-101 373.2 274 68.2
QL03p012758 Quercus lobata HOM05D007200 ORTHO05D009030 5.0e-101 371.7 291 62.9
AUR62005175 Chenopodium quinoa HOM05D007200 ORTHO05D009030 1.5e-100 370.2 282 63.8
AUR62000793 Chenopodium quinoa HOM05D007200 ORTHO05D009030 2.5e-100 369.4 283 64.0
Glyma.10G153100 Glycine max HOM05D007200 ORTHO05D009030 2.5e-100 369.4 247 71.7
Phvul.007G196200 Phaseolus vulgaris HOM05D007200 ORTHO05D009030 2.5e-100 369.4 247 72.5
Sabra05G0032400 Salix brachista HOM05D007200 ORTHO05D009030 9.5e-100 367.5 289 64.4
Aqoxy5G00700 Aquilegia oxysepala HOM05D007200 ORTHO05D009030 1.2e-99 367.1 290 63.8
Rhsim05G0141700 Rhododendron simsii HOM05D007200 ORTHO05D009030 1.6e-99 366.7 263 67.7
Atru.chr12.1493 Acer truncatum HOM05D007200 ORTHO05D009030 2.1e-99 366.3 290 64.1
Haze_04164 Corylus avellana HOM05D007200 ORTHO05D009030 2.8e-99 365.9 294 62.2
Gohir.A11G266300 Gossypium hirsutum HOM05D007200 ORTHO05D009030 8.0e-99 364.4 287 63.4
HanXRQChr11g0339441 Helianthus annuus HOM05D007200 ORTHO05D009030 1.0e-98 364.0 273 67.0
Lj9C128T5 Lonicera japonica HOM05D007200 ORTHO05D009030 1.0e-98 364.0 265 67.2
Eucgr.B01933 Eucalyptus grandis HOM05D007200 ORTHO05D009030 1.8e-98 363.2 266 66.2
Lsat_1_v5_gn_9_87521 Lactuca sativa HOM05D007200 ORTHO05D009030 5.2e-98 361.7 276 65.6
Lalb_Chr21g0310651 Lupinus albus HOM05D007200 ORTHO05D009030 2.0e-97 359.8 271 64.6
Cfa006611 Carpinus fangiana HOM05D007200 ORTHO05D009030 3.4e-97 359.0 292 61.0
Gorai.007G298700 Gossypium raimondii HOM05D007200 ORTHO05D009030 3.4e-97 359.0 287 62.7
Gohir.D11G276600 Gossypium hirsutum HOM05D007200 ORTHO05D009030 4.4e-97 358.6 287 62.7
Prupe.6G323000 Prunus persica HOM05D007200 ORTHO05D009030 7.5e-97 357.8 254 70.9
Medtr1g083110 Medicago truncatula HOM05D007200 ORTHO05D009030 1.3e-96 357.1 261 67.8
PGR083G0889 Punica granatum HOM05D007200 ORTHO05D009030 2.9e-96 355.9 288 61.5
Aa31LG5G15970 Aethionema arabicum HOM05D007200 ORTHO05D009030 3.7e-96 355.5 249 68.3
CiPaw.07G020000 Carya illinoinensis HOM05D007200 ORTHO05D009030 1.4e-95 353.6 271 63.8
THA.LOC104818708 Tarenaya hassleriana HOM05D007200 ORTHO05D009030 3.2e-95 352.4 289 62.6
CARHR079750 Cardamine hirsuta HOM05D007200 ORTHO05D009030 9.2e-95 350.9 291 59.8
Lj9C124T9 Lonicera japonica HOM05D007200 ORTHO05D009030 9.2e-95 350.9 289 61.6
Lj5g0005198 Lotus japonicus HOM05D007200 ORTHO05D009030 9.2e-95 350.9 269 63.9
AL3G15960 Arabidopsis lyrata HOM05D007200 ORTHO05D009030 1.2e-94 350.5 290 61.0
COL.COLO4_10491 Corchorus olitorius HOM05D007200 ORTHO05D009030 1.2e-94 350.5 268 65.7
Psat6g149880 Pisum sativum HOM05D007200 ORTHO05D009030 1.6e-94 350.1 271 64.9
Thhalv10021289m.g Eutrema salsugineum HOM05D007200 ORTHO05D009030 7.8e-94 347.8 249 66.7
AT3G05410 Arabidopsis thaliana HOM05D007200 ORTHO05D009030 1.0e-93 347.4 291 61.5
Carub.0003s0469 Capsella rubella HOM05D007200 ORTHO05D009030 1.0e-93 347.4 293 60.8
Migut.O00553 Erythranthe guttata HOM05D007200 ORTHO05D009030 1.0e-93 347.4 277 62.8
FAN02G4393 Fragaria x ananassa HOM05D007200 ORTHO05D009030 2.3e-93 346.3 290 61.4
BcaC05g30148 Brassica carinata HOM05D007200 ORTHO05D009030 3.0e-93 345.9 249 67.5
Cpa.g.sc48.76 Carica papaya HOM05D007200 ORTHO05D009030 3.0e-93 345.9 290 60.3
Migut.N01991 Erythranthe guttata HOM05D007200 ORTHO05D009030 3.9e-93 345.5 266 63.9
TPR.G6036 Trifolium pratense HOM05D007200 ORTHO05D009030 3.9e-93 345.5 271 63.5
CsaV3_2G006520 Cucumis sativus L. HOM05D007200 ORTHO05D009030 6.6e-93 344.7 250 68.4
Sp3g04270 Schrenkiella parvula HOM05D007200 ORTHO05D009030 6.6e-93 344.7 249 66.3
arahy.Tifrunner.gnm1.ann1.PH9A9F Arachis hypogaea HOM05D007200 ORTHO05D009030 8.6e-93 344.4 249 70.3
BraA05t23030Z Brassica rapa HOM05D007200 ORTHO05D009030 8.6e-93 344.4 249 67.9
Sed0020284 Sechium edule HOM05D007200 ORTHO05D009030 8.6e-93 344.4 251 68.5
Cc02_g31060 Coffea canephora HOM05D007200 ORTHO05D009030 1.1e-92 344.0 251 68.5
arahy.Tifrunner.gnm1.ann1.H2XQXC Arachis hypogaea HOM05D007200 ORTHO05D009030 5.6e-92 341.7 249 69.9
BolC5t34842H Brassica oleracea HOM05D007200 ORTHO05D000438 9.5e-92 340.9 249 66.7
BcaC05g30124 Brassica carinata HOM05D007200 ORTHO05D009030 2.1e-91 339.7 249 66.7
MELO3C004233.2 Cucumis melo HOM05D007200 ORTHO05D009030 2.6e-89 332.8 253 66.4
EL10Ac4g09392 Beta vulgaris HOM05D007200 ORTHO05D009030 5.8e-89 331.6 285 57.2
FAN05G3823 Fragaria x ananassa HOM05D000179 ORTHO05D009030 5.4e-87 325.1 222 70.7
vmacro19623 Vaccinium macrocarpon HOM05D007200 ORTHO05D009030 1.2e-86 323.9 249 66.7
Zm00001eb142170 Zea mays HOM05D007200 ORTHO05D009030 2.7e-86 322.8 250 63.2
SGA_v2.0_scaffold98G29315 Striga asiatica HOM05D007200 ORTHO05D009030 2.3e-85 319.7 262 61.1
MBI19_g12813_MAGBIO Magnolia biondii HOM05D007200 ORTHO05D009030 3.0e-85 319.3 267 62.2
Ah.04g160430 Amaranthus hybridus HOM05D007200 ORTHO05D009030 1.5e-84 317.0 278 58.3
unitig_746.g26859 Utricularia gibba HOM05D004477 ORTHO05D005615 1.2e-83 313.9 249 63.1
MSTRG.27987 Avicennia marina HOM05D007200 ORTHO05D009030 2.1e-83 313.2 270 59.6
CANSAT54G2778 Cannabis sativa HOM05D007200 ORTHO05D009030 3.6e-83 312.4 209 72.2
PSO210G0998 Papaver somniferum HOM05D007200 ORTHO05D009030 4.7e-83 312.0 291 58.1
ATR0706G032 Amborella trichopoda HOM05D007200 ORTHO05D009030 5.8e-81 305.1 249 61.8
PSO832G2855 Papaver somniferum HOM05D007200 ORTHO05D009030 8.3e-80 301.2 290 57.6
BcaC05g30126 Brassica carinata HOM05D007200 ORTHO05D009030 7.1e-79 298.1 249 61.4
ClCG02G015570 Citrullus lanatus HOM05D007200 ORTHO05D009030 2.7e-78 296.2 253 62.5
CDE02G3507 Ceratophyllum demersum HOM05D007200 ORTHO05D009030 7.3e-76 288.1 275 54.9
Potri.005G027100 Populus trichocarpa HOM05D007200 ORTHO05D009030 2.0e-73 280.0 224 64.3
HPP92_006928 Vanilla planifolia HOM05D000065 ORTHO05D001606 1.1e-68 264.2 233 57.5
Pp3c2_22000 Physcomitrium patens HOM05D007200 ORTHO05D009030 2.1e-59 233.4 248 51.2
AagrBONN_evm.TU.Sc2ySwM_228.2760 Anthoceros agrestis HOM05D007200 ORTHO05D009030 2.4e-58 229.9 240 49.2
Os01g0934400 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 1.5e-57 227.3 179 60.9
Mapoly0092s0016 Marchantia polymorpha HOM05D007200 ORTHO05D009030 7.6e-57 224.9 239 47.7
Hund07085 Selenicereus undatus HOM05D007200 ORTHO05D009030 1.4e-55 220.7 177 60.5
SMO140G0101 Selaginella moellendorffii HOM05D007200 ORTHO05D009030 4.3e-52 209.1 238 47.9
SGA_v2.0_scaffold95G28806 Striga asiatica HOM05D007200 ORTHO05D009030 4.9e-48 195.7 160 62.5
AUR62004827 Chenopodium quinoa HOM05D007200 ORTHO05D009030 1.9e-47 193.7 175 56.6
Sc16g0008540 Simmondsia chinensis HOM05D007200 ORTHO05D009030 1.2e-46 191.0 187 56.7
CBR_g32304 Chara braunii HOM05D007200 ORTHO05D009030 2.3e-45 186.8 266 39.1
PRCOL_00003141 Prasinoderma coloniale HOM05D007200 ORTHO05D009030 3.4e-41 172.9 235 45.5
Cre09.g389578 Chlamydomonas reinhardtii HOM05D007200 ORTHO05D009030 8.4e-40 168.3 257 39.3
MCO07G015 Micromonas commoda HOM05D007200 ORTHO05D009030 9.3e-39 164.9 241 41.1
Actinidia19786 Actinidia chinensis HOM05D007200 ORTHO05D009030 2.0e-33 147.1 107 62.6
Oeu012109.1 Olea europaea HOM05D007200 ORTHO05D009030 4.5e-33 146.0 105 65.7
MD04G1202900 Malus domestica HOM05D007200 ORTHO05D009030 5.3e-26 122.5 120 55.8
C05p61820 Brassica napus HOM05D000205 ORTHO05D000438 1.9e-23 114.0 144 47.9
Os01g0934350 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 3.4e-17 93.2 71 62.0
CAN.G1228.6 Capsicum annuum HOM05D002933 ORTHO05D007742 6.7e-13 79.0 185 29.7
Hma1.2p1_0060F.1_g032910 Hydrangea macrophylla HOM05D002933 ORTHO05D007742 6.7e-13 79.0 185 28.6
AUR62032114 Chenopodium quinoa HOM05D002933 ORTHO05D007742 2.6e-12 77.0 226 26.5
AUR62039657 Chenopodium quinoa HOM05D002933 ORTHO05D007742 2.6e-12 77.0 224 26.3
PSO135G0212 Papaver somniferum HOM05D002933 ORTHO05D007742 1.7e-11 74.3 282 24.5
PGSC0003DMG400024531 Solanum tuberosum HOM05D002933 ORTHO05D007742 1.7e-11 74.3 185 28.1
Hund02566 Selenicereus undatus HOM05D002933 ORTHO05D007742 3.7e-11 73.2 185 28.1
BcaC02g09745 Brassica carinata HOM05D002933 ORTHO05D007742 4.8e-11 72.8 186 28.5
BolC4t25275H Brassica oleracea HOM05D002933 ORTHO05D007742 4.8e-11 72.8 186 28.5
PSO384G2709 Papaver somniferum HOM05D002933 ORTHO05D007742 4.8e-11 72.8 282 24.5
EL10Ac5g11164 Beta vulgaris HOM05D002933 ORTHO05D007742 6.3e-11 72.4 227 25.1
Carub.0005s2198 Capsella rubella HOM05D002933 ORTHO05D007742 6.3e-11 72.4 186 27.4
Solyc03g114930.3 Solanum lycopersicum HOM05D002933 ORTHO05D007742 6.3e-11 72.4 185 27.6
Sopen03g034010 Solanum pennellii HOM05D002933 ORTHO05D007742 6.3e-11 72.4 185 27.6
A04p04610 Brassica napus HOM05D002933 ORTHO05D007742 8.2e-11 72.0 186 28.5
BraA04t16171Z Brassica rapa HOM05D002933 ORTHO05D007742 8.2e-11 72.0 186 28.5
BcaB02g08429 Brassica carinata HOM05D002933 ORTHO05D007742 3.1e-10 70.1 186 27.4
Migut.B00505 Erythranthe guttata HOM05D002933 ORTHO05D007742 3.1e-10 70.1 226 25.7
Thhalv10010685m.g Eutrema salsugineum HOM05D002933 ORTHO05D007742 7.0e-10 68.9 186 26.9
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 1.2e-09 68.2 234 23.5
unitig_52.g17502 Utricularia gibba HOM05D002933 ORTHO05D007742 3.5e-09 66.6 185 28.1
Ciclev10032564m.g Citrus clementina HOM05D002933 ORTHO05D007742 5.9e-09 65.9 187 26.7
PRCOL_00000618 Prasinoderma coloniale HOM05D002933 ORTHO05D007742 2.5e-07 60.5 184 24.5


User provided reference genes

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