Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 1.0e-103 380.2 206 100.0
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 6.0e-96 354.4 206 94.7
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 5.6e-86 321.2 203 87.2
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 4.5e-83 311.6 209 85.2
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 5.8e-83 311.2 209 85.6
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 1.9e-81 306.2 209 84.2
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 7.4e-70 267.7 204 72.5
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 1.8e-68 263.1 208 68.3
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 4.1e-68 261.9 208 69.7
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 4.5e-67 258.5 215 64.7
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 1.0e-66 257.3 207 67.1
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 1.1e-65 253.8 216 64.4
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 3.0e-63 245.7 207 72.5
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 4.4e-62 241.9 206 64.6
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.3e-61 240.4 201 70.6
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 2.2e-61 239.6 207 63.8
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 2.8e-61 239.2 208 63.9
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 3.7e-61 238.8 208 65.9
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 8.2e-61 237.7 205 62.0
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 1.1e-60 237.3 206 64.1
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 1.4e-60 236.9 214 64.5
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 2.4e-60 236.1 214 63.6
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 9.1e-60 234.2 208 64.9
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 1.2e-59 233.8 215 68.8
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 1.2e-59 233.8 213 63.4
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 3.4e-59 232.3 210 61.4
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 4.5e-59 231.9 219 64.8
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 7.7e-59 231.1 211 67.8
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 2.2e-58 229.6 208 62.5
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 3.8e-58 228.8 207 63.8
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 3.8e-58 228.8 205 63.4
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 6.5e-58 228.0 207 60.9
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 1.1e-57 227.3 198 68.7
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 1.1e-57 227.3 212 69.3
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 1.9e-57 226.5 214 57.9
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 1.9e-57 226.5 185 64.3
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 2.5e-57 226.1 216 66.7
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 2.5e-57 226.1 206 61.2
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 2.5e-57 226.1 206 65.0
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 4.2e-57 225.3 206 58.7
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 5.5e-57 224.9 191 63.4
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 5.5e-57 224.9 206 60.7
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 5.5e-57 224.9 209 63.2
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 7.2e-57 224.6 159 69.8
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 9.4e-57 224.2 206 60.7
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 1.2e-56 223.8 207 59.4
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 1.2e-56 223.8 206 60.2
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.2e-56 223.8 206 60.2
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 1.6e-56 223.4 198 63.1
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.6e-56 223.4 209 62.7
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 2.1e-56 223.0 211 60.2
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 2.7e-56 222.6 190 63.2
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 3.6e-56 222.2 209 62.7
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 4.7e-56 221.9 218 66.5
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 7.9e-56 221.1 208 62.5
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 7.9e-56 221.1 223 64.1
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 5.2e-55 218.4 212 63.2
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 1.5e-54 216.9 208 58.2
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 2.0e-54 216.5 209 65.1
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 3.3e-54 215.7 209 64.1
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 5.7e-54 214.9 215 62.8
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 4.8e-53 211.8 151 68.2
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 6.3e-53 211.5 206 61.7
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 8.2e-53 211.1 199 58.8
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 8.2e-53 211.1 174 68.4
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.4e-52 210.3 151 76.8
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 1.8e-52 209.9 208 55.8
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 3.1e-52 209.1 116 83.6
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 4.1e-52 208.8 182 62.6
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.2e-51 207.2 204 57.4
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 1.2e-51 207.2 150 70.0
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 1.2e-51 207.2 207 54.1
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 1.6e-51 206.8 177 63.3
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 2.0e-51 206.5 116 81.9
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 2.0e-51 206.5 194 57.7
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 2.6e-51 206.1 212 60.4
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 4.5e-51 205.3 181 60.8
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.0e-50 204.1 203 57.1
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 2.9e-50 202.6 116 80.2
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 6.5e-50 201.4 207 55.1
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 6.5e-50 201.4 209 55.5
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 8.5e-50 201.1 194 62.9
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 1.9e-49 199.9 196 57.1
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 2.5e-49 199.5 198 57.1
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 2.5e-49 199.5 198 57.1
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 2.5e-49 199.5 149 73.2
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 2.5e-49 199.5 113 77.9
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 3.2e-49 199.1 116 78.4
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 5.5e-49 198.4 210 54.8
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 7.2e-49 198.0 209 54.5
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 7.2e-49 198.0 210 53.3
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 1.6e-48 196.8 113 78.8
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 2.1e-48 196.4 113 77.0
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 1.4e-47 193.7 148 75.0
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 1.8e-47 193.4 112 78.6
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 3.0e-47 192.6 112 78.6
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 3.0e-47 192.6 112 78.6
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 3.0e-47 192.6 112 78.6
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 3.0e-47 192.6 112 78.6
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 3.0e-47 192.6 112 78.6
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 4.0e-47 192.2 111 79.3
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 2.0e-46 189.9 177 57.6
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 2.0e-46 189.9 206 52.9
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 2.0e-46 189.9 204 51.5
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 3.7e-45 185.7 186 61.3
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 6.3e-45 184.9 184 57.1
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 1.8e-44 183.3 196 54.6
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 3.1e-44 182.6 161 56.5
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 4.5e-43 178.7 182 61.5
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 7.7e-43 177.9 117 70.9
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.0e-42 177.6 117 70.1
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 8.5e-42 174.5 176 61.4
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 7.2e-41 171.4 109 75.2
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 2.1e-40 169.9 149 57.0
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 6.1e-40 168.3 113 67.3
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 1.8e-39 166.8 109 73.4
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 4.0e-39 165.6 153 66.7
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 1.2e-38 164.1 108 69.4
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 2.6e-38 162.9 112 67.0
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 5.7e-38 161.8 109 64.2
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 2.8e-37 159.5 119 63.0
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 1.6e-35 153.7 181 53.0
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 1.6e-27 127.1 109 52.3
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 2.0e-27 126.7 113 49.6
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 1.5e-22 110.5 145 41.4
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 1.7e-21 107.1 108 48.1
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 2.8e-16 89.7 90 50.0
Actinidia36920 Actinidia chinensis HOM05D006377 ORTHO05D057244 2.8e-08 63.2 114 37.7


User provided reference genes

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