Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 2.9e-182 641.7 313 100.0
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 4.3e-154 548.1 313 85.9
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 6.2e-153 544.3 312 85.3
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 5.3e-152 541.2 313 84.7
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 1.3e-134 483.4 311 75.9
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 9.4e-133 477.2 313 77.3
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 8.8e-131 470.7 309 72.8
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 2.5e-130 469.2 309 73.8
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 3.7e-129 465.3 309 73.5
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.0e-126 457.2 308 73.4
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 6.5e-126 454.5 313 70.9
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 5.5e-125 451.4 310 71.3
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 5.5e-125 451.4 312 71.2
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 8.8e-123 444.1 308 69.2
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 3.3e-122 442.2 315 70.2
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 1.7e-121 439.9 311 68.8
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 2.8e-121 439.1 304 69.4
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 4.8e-121 438.3 305 69.2
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 9.1e-120 434.1 327 67.0
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.2e-119 433.7 314 70.4
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 5.9e-119 431.4 308 66.9
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 7.7e-119 431.0 305 66.2
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 2.9e-118 429.1 310 64.5
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 3.8e-118 428.7 302 65.9
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.9e-117 426.4 301 66.1
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 1.9e-117 426.4 310 67.4
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 3.2e-117 425.6 313 64.9
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 3.2e-117 425.6 311 65.3
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 7.2e-117 424.5 310 65.2
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 1.6e-116 423.3 308 65.3
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.1e-116 422.9 308 64.9
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 2.1e-116 422.9 307 67.8
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 2.7e-116 422.5 304 66.4
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 6.1e-116 421.4 308 64.9
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.0e-115 420.6 310 64.5
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.4e-115 420.2 310 64.8
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.0e-115 419.1 309 64.7
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 3.0e-115 419.1 306 65.4
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 1.1e-114 417.2 305 65.2
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.0e-114 416.4 301 66.8
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 2.0e-114 416.4 316 63.6
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 3.3e-114 415.6 305 65.6
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 5.7e-114 414.8 308 63.6
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 5.7e-114 414.8 301 66.8
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 2.8e-113 412.5 309 64.4
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.1e-112 410.6 299 64.9
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.4e-112 410.2 305 64.6
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 1.8e-112 409.8 296 63.9
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 2.4e-112 409.5 309 64.4
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 5.9e-111 404.8 309 64.7
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 7.7e-111 404.4 304 63.5
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 1.0e-110 404.1 306 63.1
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 1.7e-110 403.3 303 64.4
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 2.9e-110 402.5 309 63.8
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 2.9e-110 402.5 301 64.5
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 5.0e-110 401.7 304 63.2
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 6.5e-110 401.4 307 62.2
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 6.5e-110 401.4 308 62.3
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 8.5e-110 401.0 307 63.2
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 1.1e-109 400.6 310 61.9
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 1.1e-109 400.6 305 62.0
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 1.9e-109 399.8 305 62.0
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 3.2e-109 399.1 309 64.1
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 3.2e-109 399.1 311 63.0
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 4.2e-109 398.7 308 62.0
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 5.5e-109 398.3 301 63.5
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 7.2e-109 397.9 308 62.0
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 3.6e-108 395.6 300 62.7
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 4.7e-108 395.2 301 62.1
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 6.1e-108 394.8 300 64.3
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 8.0e-108 394.4 308 61.0
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 1.0e-107 394.0 302 62.3
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 1.4e-107 393.7 301 62.5
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.8e-107 391.0 305 62.0
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.5e-106 390.2 195 95.4
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 1.5e-106 390.2 303 63.4
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 9.7e-106 387.5 306 60.8
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 1.3e-105 387.1 305 62.3
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.8e-104 383.3 322 58.4
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 5.0e-102 375.2 301 60.8
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 5.2e-99 365.2 249 72.7
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 2.6e-98 362.8 255 71.8
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 3.7e-97 359.0 313 56.5
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 7.7e-95 351.3 300 54.3
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.0e-94 350.9 311 58.2
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 1.2e-92 344.0 304 55.6
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.4e-91 340.5 307 57.7
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 1.1e-85 320.9 262 59.9
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 8.9e-83 311.2 245 62.4
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 1.5e-82 310.5 229 63.3
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 2.6e-82 309.7 244 62.3
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 2.4e-80 303.1 282 54.6
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 2.0e-79 300.1 418 39.0
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.9e-78 295.8 305 51.1
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.4e-75 287.3 213 68.1
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 3.5e-71 272.7 241 58.1
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 8.1e-68 261.5 305 47.2
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 8.1e-68 261.5 302 45.0
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.4e-64 250.8 203 58.1
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 2.7e-63 246.5 196 62.8
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 6.6e-62 241.9 261 51.3
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 5.8e-58 228.8 167 63.5
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.2e-57 226.9 305 43.9
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 2.1e-55 220.3 145 71.0
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 7.3e-53 211.8 168 59.5
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 9.6e-53 211.5 165 61.2
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 2.4e-51 206.8 149 68.5
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 2.4e-51 206.8 149 68.5
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 4.0e-51 206.1 139 70.5
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 9.3e-48 194.9 162 59.3
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 1.0e-46 191.4 142 62.0
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 1.1e-43 181.4 161 56.5
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 9.0e-43 178.3 130 62.3
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.8e-41 172.9 105 73.3
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 4.9e-41 172.6 162 56.8
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 2.4e-35 153.7 117 68.4
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 7.6e-34 148.7 111 60.4
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 3.0e-30 136.7 112 62.5
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.6e-23 114.4 91 62.6
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.5e-23 113.2 109 55.0
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.9e-22 109.8 110 55.5
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 6.7e-22 109.0 109 53.2
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 6.7e-22 109.0 109 53.2
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 3.1e-19 100.1 154 36.4
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.4e-18 96.7 94 55.3
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 4.5e-18 96.3 145 39.3
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 7.9e-15 85.5 71 59.2
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.1e-11 73.2 61 62.3
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.5e-10 69.7 55 65.5
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 3.9e-06 56.6 68 45.6
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 6.7e-06 55.8 69 43.5


User provided reference genes

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