Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002344g0160 Nicotiana tabacum HOM05D005016 ORTHO05D005740 1.5e-124 449.5 220 100.0
CAN.G1034.54 Capsicum annuum HOM05D005016 ORTHO05D005740 1.1e-31 141.0 248 39.5
PGSC0003DMG400009473 Solanum tuberosum HOM05D005016 ORTHO05D005740 7.2e-31 138.3 243 38.7
Solyc04g072880.3 Solanum lycopersicum HOM05D005016 ORTHO05D005740 9.5e-31 137.9 243 38.7
Sopen04g029030 Solanum pennellii HOM05D005016 ORTHO05D005740 4.7e-30 135.6 241 38.2
Peaxi162Scf00235g00215 Petunia axillaris HOM05D005016 ORTHO05D005740 6.1e-30 135.2 248 38.7
Solyc01g099310.4 Solanum lycopersicum HOM05D005016 ORTHO05D005740 1.4e-29 134.0 244 37.3
Sopen01g042860 Solanum pennellii HOM05D005016 ORTHO05D005740 3.0e-29 132.9 244 36.9
Cc02_g33260 Coffea canephora HOM05D005016 ORTHO05D005740 7.8e-25 118.2 243 35.4
Nitab4.5_0002144g0050 Nicotiana tabacum HOM05D005016 ORTHO05D005740 5.6e-23 112.1 249 34.9
Nitab4.5_0003830g0020 Nicotiana tabacum HOM05D005016 ORTHO05D005740 7.3e-23 111.7 249 34.9
PGSC0003DMG400024698 Solanum tuberosum HOM05D005016 ORTHO05D005740 1.0e-21 107.8 172 43.6
Migut.M00036 Erythranthe guttata HOM05D005016 ORTHO05D005740 3.2e-18 96.3 238 32.8
CSS0032285 Camellia sinensis var. sinensis HOM05D005016 ORTHO05D005740 7.0e-18 95.1 236 31.8
MSTRG.6641 Avicennia marina HOM05D005016 ORTHO05D005740 1.2e-17 94.4 238 31.5
SGA_v2.0_scaffold73G24502 Striga asiatica HOM05D005016 ORTHO05D005740 1.2e-17 94.4 239 32.6
Dinv09444 Davidia involucrata HOM05D005016 ORTHO05D005740 5.9e-17 92.0 198 36.4
Hma1.2p1_0268F.1_g107630 Hydrangea macrophylla HOM05D005016 ORTHO05D005740 1.3e-16 90.9 195 35.4
DCAR_002182 Daucus carota HOM05D005016 ORTHO05D005740 1.7e-16 90.5 205 33.2
PSO675G5142 Papaver somniferum HOM05D005016 ORTHO05D005740 1.5e-15 87.4 194 32.5
Oeu012104.3 Olea europaea HOM05D005016 ORTHO05D005740 7.3e-15 85.1 237 34.2
PSO541G5136 Papaver somniferum HOM05D005016 ORTHO05D005740 7.3e-15 85.1 241 28.6
Rhsim05G0222800 Rhododendron simsii HOM05D005016 ORTHO05D005740 1.2e-14 84.3 308 27.9
CiPaw.07G019300 Carya illinoinensis HOM05D005016 ORTHO05D005740 2.1e-14 83.6 234 29.9
PSO170G0092 Papaver somniferum HOM05D005016 ORTHO05D005740 2.8e-14 83.2 190 32.1
Actinidia03321 Actinidia chinensis HOM05D005016 ORTHO05D005740 3.6e-14 82.8 236 30.1
TAR633G2288 Trochodendron aralioides HOM05D005016 ORTHO05D005740 8.0e-14 81.6 190 32.1
Duzib177G0724 Durio zibethinus HOM05D005016 ORTHO05D005740 1.8e-13 80.5 238 26.5
Nn4g24543 Nelumbo nucifera HOM05D005016 ORTHO05D005740 3.1e-13 79.7 198 34.3
GSVIVG01031086001 Vitis vinifera HOM05D005016 ORTHO05D005740 5.2e-13 79.0 196 31.6
unitig_899.g15345 Utricularia gibba HOM05D005016 ORTHO05D005740 1.2e-12 77.8 185 33.0
Prupe.6G323600 Prunus persica HOM05D005016 ORTHO05D005740 1.5e-12 77.4 236 28.4
SalBow7G0803 Salvia bowleyana HOM05D005016 ORTHO05D005740 3.4e-12 76.3 162 36.4
HanXRQChr12g0365431 Helianthus annuus HOM05D005016 ORTHO05D005740 4.4e-12 75.9 192 33.3
vmacro04578 Vaccinium macrocarpon HOM05D005016 ORTHO05D005740 4.4e-12 75.9 195 33.3
CANSAT54G1439 Cannabis sativa HOM05D005016 ORTHO05D005740 5.8e-12 75.5 188 31.4
ECA236G0643 Erigeron canadensis HOM05D005016 ORTHO05D005740 5.8e-12 75.5 233 27.5
Gohir.A11G266100 Gossypium hirsutum HOM05D005016 ORTHO05D005740 9.8e-12 74.7 213 27.7
Gohir.D11G276400 Gossypium hirsutum HOM05D005016 ORTHO05D005740 9.8e-12 74.7 213 27.7
Manes.09G168600 Manihot esculenta HOM05D005016 ORTHO05D005740 9.8e-12 74.7 188 34.6
QL03p007603 Quercus lobata HOM05D005016 ORTHO05D005740 1.7e-11 73.9 213 29.1
HPP92_024286 Vanilla planifolia HOM05D005016 ORTHO05D005740 1.7e-11 73.9 191 31.9
MBI16_g23767_MAGBIO Magnolia biondii HOM05D005016 ORTHO05D005740 2.2e-11 73.6 197 30.5
Os03g0737600 Oryza sativa ssp. japonica HOM05D005016 ORTHO05D005740 2.2e-11 73.6 191 28.8
VMungo0720G0219 Vigna mungo HOM05D005016 ORTHO05D005740 2.9e-11 73.2 167 32.9
MD12G1217300 Malus domestica HOM05D005016 ORTHO05D005740 4.9e-11 72.4 234 26.9
Thecc.05G310100 Theobroma cacao HOM05D005016 ORTHO05D005740 4.9e-11 72.4 235 26.8
HPP92_024312 Vanilla planifolia HOM05D005016 ORTHO05D005740 4.9e-11 72.4 192 30.7
QL03p007589 Quercus lobata HOM05D005016 ORTHO05D005740 6.4e-11 72.0 212 28.8
QL03p012886 Quercus lobata HOM05D005016 ORTHO05D005740 6.4e-11 72.0 212 28.8
Eucgr.B01853 Eucalyptus grandis HOM05D005016 ORTHO05D005740 8.3e-11 71.6 188 29.8
Gorai.007G298500 Gossypium raimondii HOM05D005016 ORTHO05D005740 1.1e-10 71.2 188 29.8
Eucgr.B01941 Eucalyptus grandis HOM05D005016 ORTHO05D005740 1.4e-10 70.9 188 29.3
Lsat_1_v5_gn_8_67801 Lactuca sativa HOM05D005016 ORTHO05D005740 2.4e-10 70.1 219 25.6
Lj5g0018596 Lotus japonicus HOM05D005016 ORTHO05D005740 3.2e-10 69.7 213 27.7
Zm00001eb056480 Zea mays HOM05D005016 ORTHO05D005740 4.1e-10 69.3 193 29.0
BcaC03g17793 Brassica carinata HOM05D001965 ORTHO05D005740 5.4e-10 68.9 231 28.1
Aa31LG11G9370 Aethionema arabicum HOM05D001965 ORTHO05D005740 1.2e-09 67.8 220 27.7
FAN14G2756 Fragaria x ananassa HOM05D005016 ORTHO05D005740 1.2e-09 67.8 236 27.5
TPR.G6101 Trifolium pratense HOM05D005016 ORTHO05D005740 1.2e-09 67.8 234 26.1
ClCG01G016560 Citrullus lanatus HOM05D005016 ORTHO05D005740 1.6e-09 67.4 238 25.6
RcHm_v2.0_Chr3g0455221 Rosa chinensis HOM05D005016 ORTHO05D005740 1.6e-09 67.4 241 26.6
THA.LOC104821717 Tarenaya hassleriana HOM05D005016 ORTHO05D005740 1.6e-09 67.4 188 29.8
ATR0053G060 Amborella trichopoda HOM05D005016 ORTHO05D005740 2.0e-09 67.0 184 29.9
C02p58190 Brassica napus HOM05D001965 ORTHO05D005740 2.7e-09 66.6 236 27.1
BraA02t08844Z Brassica rapa HOM05D001965 ORTHO05D005740 2.7e-09 66.6 236 27.1
CSS0007157 Camellia sinensis var. sinensis HOM05D005016 ORTHO05D005740 2.7e-09 66.6 147 32.7
CiPaw.08G163500 Carya illinoinensis HOM05D005016 ORTHO05D005740 2.7e-09 66.6 213 27.2
Glyma.06G164600 Glycine max HOM05D005016 ORTHO05D005740 2.7e-09 66.6 202 32.2
A06p37400 Brassica napus HOM05D001965 ORTHO05D002112 4.6e-09 65.9 189 30.7
BolC2t11886H Brassica oleracea HOM05D001965 ORTHO05D005740 4.6e-09 65.9 232 27.2
BraA06t26664Z Brassica rapa HOM05D001965 ORTHO05D002112 4.6e-09 65.9 189 30.7
Ciclev10001764m.g Citrus clementina HOM05D005016 ORTHO05D005740 4.6e-09 65.9 238 26.5
THA.LOC104818706 Tarenaya hassleriana HOM05D005016 ORTHO05D005740 4.6e-09 65.9 236 27.1
A02p38680 Brassica napus HOM05D001965 ORTHO05D005740 6.0e-09 65.5 236 26.7
Sed0001919 Sechium edule HOM05D005016 ORTHO05D005740 7.8e-09 65.1 191 28.3
Medtr1g083060 Medicago truncatula HOM05D005016 ORTHO05D005740 1.0e-08 64.7 193 29.5
Lalb_Chr02g0155631 Lupinus albus HOM05D005016 ORTHO05D005740 1.3e-08 64.3 190 28.9
Sc09g0003080 Simmondsia chinensis HOM05D005016 ORTHO05D005740 1.3e-08 64.3 189 28.6
C07p40950 Brassica napus HOM05D001965 ORTHO05D002112 1.7e-08 63.9 185 31.4
COL.COLO4_10485 Corchorus olitorius HOM05D005016 ORTHO05D005740 1.7e-08 63.9 213 27.7
Thhalv10004554m.g Eutrema salsugineum HOM05D005016 ORTHO05D005740 1.7e-08 63.9 216 27.3
Potri.005G027700 Populus trichocarpa HOM05D005016 ORTHO05D005740 1.7e-08 63.9 166 31.9
Sp2g20780 Schrenkiella parvula HOM05D005016 ORTHO05D005740 2.3e-08 63.5 216 28.2
AT5G27620 Arabidopsis thaliana HOM05D005016 ORTHO05D005740 3.0e-08 63.2 216 27.3
AL6G39410 Arabidopsis lyrata HOM05D005016 ORTHO05D005740 5.0e-08 62.4 216 26.4
BraA09t36174Z Brassica rapa HOM05D005016 ORTHO05D005740 6.6e-08 62.0 221 25.8
arahy.Tifrunner.gnm1.ann1.IT2BBU Arachis hypogaea HOM05D005016 ORTHO05D005740 8.6e-08 61.6 187 29.9
CARHR186150 Cardamine hirsuta HOM05D005016 ORTHO05D005740 8.6e-08 61.6 216 27.3
Carub.0006s2497 Capsella rubella HOM05D005016 ORTHO05D005740 1.5e-07 60.8 216 25.0
Cpa.g.sc28.137 Carica papaya HOM05D005016 ORTHO05D005740 1.5e-07 60.8 219 26.9
BolC7t44626H Brassica oleracea HOM05D005016 ORTHO05D005740 1.9e-07 60.5 192 29.7
FvH4_6g06200 Fragaria vesca HOM05D005016 ORTHO05D005740 1.9e-07 60.5 187 29.4
Aqoxy5G00653 Aquilegia oxysepala HOM05D005016 ORTHO05D005628 2.5e-07 60.1 136 30.1
AUR62000803 Chenopodium quinoa HOM05D005016 ORTHO05D005740 3.3e-07 59.7 161 29.8
FAN09G3795 Fragaria x ananassa HOM05D005016 ORTHO05D005740 4.3e-07 59.3 160 28.8
BcaB04g19682 Brassica carinata HOM05D005016 ORTHO05D005740 5.6e-07 58.9 221 25.3
C09p05840 Brassica napus HOM05D005016 ORTHO05D005740 5.6e-07 58.9 221 25.3
BolC9t53511H Brassica oleracea HOM05D005016 ORTHO05D005740 5.6e-07 58.9 221 25.3
A09p05360 Brassica napus HOM05D005016 ORTHO05D005740 7.3e-07 58.5 219 25.6
FAN02G4356 Fragaria x ananassa HOM05D005016 ORTHO05D005740 7.3e-07 58.5 217 25.8
TWI18G0619 Tripterygium wilfordii HOM05D005016 ORTHO05D005740 7.3e-07 58.5 168 29.8
AUR62005165 Chenopodium quinoa HOM05D005016 ORTHO05D005740 9.5e-07 58.2 161 29.8
Ca_10118_v3 Cicer arietinum L. HOM05D005016 ORTHO05D005740 1.2e-06 57.8 206 25.2
Psat0s2745g0240 Pisum sativum HOM05D005016 ORTHO05D005740 1.6e-06 57.4 186 29.0
Hund07082 Selenicereus undatus HOM05D005016 ORTHO05D005740 1.6e-06 57.4 161 29.8
MD04G1203400 Malus domestica HOM05D005016 ORTHO05D005740 2.8e-06 56.6 193 25.9
Phvul.007G179300 Phaseolus vulgaris HOM05D005016 ORTHO05D005740 2.8e-06 56.6 129 31.0
Haze_04172 Corylus avellana HOM05D005016 ORTHO05D005740 8.1e-06 55.1 108 34.3


User provided reference genes

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