Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002317g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-295 1017.3 523 100.0
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 1.2e-28 132.1 222 38.7
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-25 120.9 154 46.8
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-25 120.6 111 55.0
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 6.3e-25 119.8 132 50.0
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 1.4e-24 118.6 104 55.8
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.4e-24 118.6 111 54.1
PGSC0003DMG400043117 Solanum tuberosum HOM05D008966 ORTHO05D000007 1.8e-24 118.2 216 37.5
Sopen08g015270 Solanum pennellii HOM05D000003 ORTHO05D009932 3.1e-24 117.5 206 37.9
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-24 117.1 106 54.7
Sopen07g011740 Solanum pennellii HOM05D000024 ORTHO05D000007 2.0e-23 114.8 118 50.0
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-22 112.1 127 46.5
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-22 111.7 155 42.6
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-22 111.3 100 54.0
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 3.8e-22 110.5 129 48.1
PGSC0003DMG400041037 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.0e-22 110.2 138 46.4
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 6.6e-22 109.8 257 34.6
Sopen00g014260 Solanum pennellii HOM05D000003 ORTHO05D011465 8.6e-22 109.4 208 37.5
PGSC0003DMG400041954 Solanum tuberosum HOM05D010618 ORTHO05D000007 8.6e-22 109.4 166 40.4
Sopen01g008290 Solanum pennellii HOM05D000047 ORTHO05D000589 3.3e-21 107.5 127 44.9
Sopen08g015220 Solanum pennellii HOM05D000024 ORTHO05D000007 4.2e-21 107.1 202 38.1
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 5.5e-21 106.7 237 35.9
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 9.5e-21 105.9 234 36.3
Sopen10g010990 Solanum pennellii HOM05D000024 ORTHO05D000007 9.5e-21 105.9 109 50.5
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 1.6e-20 105.1 218 36.7
Sopen11g012710 Solanum pennellii HOM05D000014 ORTHO05D000016 1.6e-20 105.1 182 38.5
PGSC0003DMG400038477 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.6e-20 105.1 200 36.5
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-20 104.8 201 35.8
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-20 104.8 214 36.9
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 2.1e-20 104.8 102 50.0
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 3.6e-20 104.0 168 39.9
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-20 104.0 214 36.0
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 8.0e-20 102.8 227 33.9
PGSC0003DMG400021013 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.0e-19 102.4 87 52.9
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-19 102.1 239 31.8
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-19 101.7 99 51.5
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 3.0e-19 100.9 238 33.6
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.2e-19 100.1 148 39.2
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 8.9e-19 99.4 240 32.5
Peaxi162Scf00709g00322 Petunia axillaris HOM05D000024 ORTHO05D000007 1.2e-18 99.0 111 45.0
Sopen05g012800 Solanum pennellii HOM05D000024 ORTHO05D000007 1.7e-17 95.1 78 56.4
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 8.3e-17 92.8 258 30.2
PGSC0003DMG400037591 Solanum tuberosum HOM05D010285 ORTHO05D011400 1.1e-13 82.4 182 33.5
PGSC0003DMG400038794 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.1e-13 82.4 166 31.9
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 5.6e-13 80.1 59 61.0
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 7.3e-13 79.7 104 45.2
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 6.1e-12 76.6 56 60.7
PGSC0003DMG400045918 Solanum tuberosum HOM05D038065 ORTHO05D000007 6.1e-12 76.6 156 35.3
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 1.4e-11 75.5 127 37.8
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-11 73.6 75 45.3
Nitab4.5_0003024g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-10 70.5 78 42.3
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-09 68.9 81 42.0
Nitab4.5_0002004g0030 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.7e-09 68.6 44 75.0
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-09 68.2 80 43.8
Nitab4.5_0003978g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-09 68.2 120 35.0
Nitab4.5_0000023g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-09 67.4 84 44.0
Nitab4.5_0005004g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-09 67.4 114 36.8
Nitab4.5_0003302g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 65.9 288 28.5
Nitab4.5_0000031g0320 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-08 65.5 107 36.4
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-08 65.1 79 40.5
Nitab4.5_0000010g0200 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-08 64.7 81 40.7
Nitab4.5_0000061g0360 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-08 64.3 77 41.6
Nitab4.5_0000230g0190 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-08 64.3 78 38.5
Nitab4.5_0001704g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-08 63.9 126 37.3
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-08 63.5 81 38.3
Nitab4.5_0003236g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-08 63.5 82 43.9
Nitab4.5_0000175g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.0e-08 63.2 107 33.6
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.0e-08 63.2 86 38.4
Nitab4.5_0000256g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-08 62.8 94 36.2
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 1.2e-07 62.4 124 34.7
Nitab4.5_0014470g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 62.0 71 43.7
Sopen04g022700 Solanum pennellii HOM05D000024 ORTHO05D000007 1.6e-07 62.0 78 41.0
Nitab4.5_0001667g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 61.6 81 42.0
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 61.6 110 34.5
Nitab4.5_0009076g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 61.6 81 40.7
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-07 61.2 96 39.6
Nitab4.5_0000468g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-07 60.5 107 34.6
Nitab4.5_0002157g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-07 60.5 81 43.2
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 4.6e-07 60.5 99 35.4
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-07 60.5 75 40.0
Nitab4.5_0011342g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-07 60.5 69 43.5
Nitab4.5_0000013g0580 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-07 60.1 77 40.3
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-07 60.1 145 31.7
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-07 60.1 73 42.5
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-07 59.7 81 39.5
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 59.3 81 42.0
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 59.3 125 32.8
Nitab4.5_0004168g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 59.3 197 28.4
Nitab4.5_0009832g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 59.3 77 39.0
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 58.9 81 39.5
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 58.9 77 39.0
Nitab4.5_0002004g0060 Nicotiana tabacum HOM05D000040 ORTHO05D010138 1.7e-06 58.5 88 37.5
Nitab4.5_0000270g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 58.2 141 32.6
Nitab4.5_0000712g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 58.2 73 41.1
Nitab4.5_0000902g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-06 57.8 66 43.9
Nitab4.5_0001569g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-06 57.8 81 35.8
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.0e-06 57.8 213 28.6
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-06 57.4 86 39.5
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 3.9e-06 57.4 70 38.6
Nitab4.5_0001361g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-06 57.0 123 32.5
Nitab4.5_0000177g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-06 56.6 88 36.4
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 8.6e-06 56.2 125 31.2


User provided reference genes

Program Settings