Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 3.5e-58 228.4 146 100.0
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 6.2e-55 217.6 146 95.9
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 1.1e-48 196.8 143 86.7
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 9.6e-48 193.7 146 85.6
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 1.6e-47 193.0 146 84.9
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 4.8e-47 191.4 146 84.2
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 1.8e-46 189.5 146 86.3
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 2.2e-44 182.6 145 83.4
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 7.1e-43 177.6 146 80.8
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 9.3e-43 177.2 146 81.5
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 8.2e-39 164.1 143 55.2
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 1.5e-37 159.8 140 75.0
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 2.9e-36 155.6 148 74.3
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 6.5e-36 154.5 148 73.6
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 1.1e-35 153.7 144 74.3
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 2.5e-35 152.5 137 76.6
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 7.2e-35 151.0 137 74.5
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.6e-34 149.8 148 72.3
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 2.7e-34 149.1 137 73.7
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 2.7e-34 149.1 148 70.9
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 3.6e-34 148.7 130 66.2
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 4.6e-34 148.3 130 75.4
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 7.9e-34 147.5 138 71.7
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 2.3e-33 146.0 137 68.6
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 3.9e-33 145.2 140 70.7
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 5.1e-33 144.8 135 74.8
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 6.7e-33 144.4 148 70.9
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 6.7e-33 144.4 135 75.6
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 8.8e-33 144.1 140 70.0
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 8.8e-33 144.1 132 70.5
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 8.8e-33 144.1 137 67.9
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 1.1e-32 143.7 137 71.5
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 1.5e-32 143.3 135 74.1
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 1.9e-32 142.9 130 76.2
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 2.5e-32 142.5 140 70.7
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 2.5e-32 142.5 144 61.1
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 4.3e-32 141.7 135 74.8
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 4.3e-32 141.7 129 73.6
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 4.3e-32 141.7 132 72.7
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 4.3e-32 141.7 132 72.7
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 7.4e-32 141.0 130 72.3
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 7.4e-32 141.0 130 72.3
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 9.7e-32 140.6 142 70.4
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 1.3e-31 140.2 88 70.5
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 2.2e-31 139.4 133 68.4
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 2.8e-31 139.0 130 72.3
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 4.8e-31 138.3 135 72.6
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 8.2e-31 137.5 134 60.4
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 1.1e-30 137.1 130 70.8
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 1.8e-30 136.3 138 68.8
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 2.4e-30 136.0 130 71.5
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 3.1e-30 135.6 143 70.6
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 4.1e-30 135.2 130 70.0
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.2e-29 133.7 135 71.1
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 1.5e-29 133.3 139 68.3
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 2.6e-29 132.5 135 65.9
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 2.6e-29 132.5 144 67.4
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 5.9e-29 131.3 137 70.1
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 5.9e-29 131.3 123 72.4
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 1.3e-28 130.2 137 67.9
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 1.3e-28 130.2 140 56.4
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 2.9e-28 129.0 128 72.7
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 2.9e-28 129.0 130 52.3
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 5.0e-28 128.3 129 72.1
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 1.4e-27 126.7 125 48.8
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 1.4e-27 126.7 130 66.9
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 2.5e-27 125.9 144 66.7
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 2.5e-27 125.9 128 68.8
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 4.7e-26 121.7 133 60.9
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 6.1e-26 121.3 139 62.6
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 6.1e-26 121.3 139 64.0
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 7.9e-26 120.9 130 64.6
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 7.9e-26 120.9 132 65.9
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 1.0e-25 120.6 128 71.9
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 1.0e-25 120.6 83 67.5
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 1.4e-25 120.2 129 63.6
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 1.8e-25 119.8 127 66.9
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 2.3e-25 119.4 119 75.6
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 3.9e-25 118.6 130 67.7
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 8.8e-25 117.5 127 65.4
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 8.8e-25 117.5 127 65.4
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 8.8e-25 117.5 121 71.9
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 2.0e-24 116.3 127 66.1
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 2.6e-24 115.9 130 63.1
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 4.4e-24 115.2 133 60.9
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 7.4e-24 114.4 127 63.0
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 1.7e-23 113.2 80 57.5
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 6.3e-23 111.3 137 54.0
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 8.2e-23 110.9 137 59.1
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 3.1e-22 109.0 80 55.0
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 1.2e-21 107.1 113 71.7
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 1.5e-21 106.7 136 40.4
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 2.0e-21 106.3 135 57.8
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 2.0e-21 106.3 135 57.8
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 2.6e-21 105.9 116 48.3
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 3.4e-21 105.5 126 59.5
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 3.4e-21 105.5 135 57.0
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 4.5e-21 105.1 135 57.0
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 1.0e-20 104.0 82 51.2
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 1.3e-20 103.6 142 39.4
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 1.7e-20 103.2 135 55.6
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 8.5e-20 100.9 136 62.5
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 8.5e-20 100.9 101 79.2
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 1.9e-19 99.8 131 57.3
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 1.9e-19 99.8 143 54.5
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 5.5e-19 98.2 135 55.6
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 2.7e-18 95.9 125 58.4
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 6.1e-18 94.7 128 54.7
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 6.1e-18 94.7 133 55.6
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 6.1e-18 94.7 133 55.6
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 9.7e-16 87.4 144 49.3
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 3.7e-15 85.5 132 42.4
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 2.4e-14 82.8 130 49.2
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 3.1e-14 82.4 96 60.4
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 2.6e-13 79.3 125 50.4
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 3.8e-12 75.5 133 47.4
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 8.5e-12 74.3 117 36.8
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 8.5e-12 74.3 117 36.8
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 8.5e-12 74.3 117 36.8
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 1.5e-11 73.6 120 35.0
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 2.5e-11 72.8 119 35.3
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 2.5e-11 72.8 119 35.3
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 5.5e-11 71.6 60 50.0
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 1.6e-10 70.1 142 33.1
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 4.7e-10 68.6 116 32.8
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 3.3e-08 62.4 58 48.3
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 4.4e-08 62.0 141 40.4
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 5.7e-08 61.6 83 56.6
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.7e-07 60.1 110 30.9


User provided reference genes

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