Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 4.3e-192 674.5 339 100.0
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.1e-182 643.3 354 92.9
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 1.5e-155 553.1 354 82.2
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 1.5e-155 553.1 354 82.2
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 8.0e-154 547.4 354 82.2
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 3.8e-140 501.9 354 75.7
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 1.9e-139 499.6 347 77.2
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 6.1e-138 494.6 354 75.1
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 2.0e-136 489.6 331 76.7
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 9.8e-136 487.3 347 74.1
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 1.7e-135 486.5 317 79.2
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 3.7e-135 485.3 324 78.4
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 1.4e-134 483.4 348 74.4
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 4.5e-133 478.4 343 74.6
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 7.8e-133 477.6 343 74.3
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 5.0e-132 474.9 341 74.5
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 6.6e-132 474.6 351 72.4
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 6.6e-132 474.6 329 76.0
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 1.5e-131 473.4 334 75.4
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 3.3e-131 472.2 321 76.6
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 3.3e-131 472.2 324 75.3
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 7.3e-131 471.1 321 76.9
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 7.3e-131 471.1 340 72.9
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 9.5e-131 470.7 324 75.9
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 9.5e-131 470.7 324 76.2
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 9.5e-131 470.7 342 73.4
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 1.2e-130 470.3 342 74.0
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 2.1e-130 469.5 321 76.3
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 2.8e-130 469.2 340 73.5
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 2.8e-130 469.2 341 74.2
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 2.8e-130 469.2 352 71.9
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 4.7e-130 468.4 344 72.4
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 3.0e-129 465.7 323 75.9
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 4.0e-129 465.3 326 75.2
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 5.2e-129 464.9 335 74.6
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 6.8e-129 464.5 342 74.0
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.2e-128 463.8 337 72.7
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 3.4e-128 462.2 345 71.9
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 4.4e-128 461.8 321 76.0
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 7.5e-128 461.1 334 73.7
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 1.3e-127 460.3 343 72.0
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 2.2e-127 459.5 331 74.0
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 2.9e-127 459.1 321 75.4
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 2.9e-127 459.1 328 74.4
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 3.7e-127 458.8 337 72.1
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 3.7e-127 458.8 321 75.1
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 4.9e-127 458.4 324 75.3
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 4.9e-127 458.4 324 75.3
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 1.4e-126 456.8 336 72.3
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 1.4e-126 456.8 338 71.6
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 2.4e-126 456.1 330 75.8
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 2.4e-126 456.1 323 74.3
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 3.2e-126 455.7 323 74.3
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 3.2e-126 455.7 336 71.4
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 1.2e-125 453.8 321 73.5
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 2.0e-125 453.0 340 70.6
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 2.7e-125 452.6 329 72.6
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.7e-125 452.6 324 74.4
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 4.6e-125 451.8 334 71.9
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 7.8e-125 451.1 343 71.1
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.3e-124 450.3 324 73.5
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.3e-124 450.3 354 68.9
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 5.0e-124 448.4 334 74.0
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.1e-123 447.2 323 73.4
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 1.5e-123 446.8 324 71.9
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 5.2e-121 438.3 400 62.8
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 3.4e-120 435.6 322 72.7
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 4.4e-120 435.3 309 71.8
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 3.7e-119 432.2 329 69.9
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 4.9e-119 431.8 323 70.3
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 3.5e-117 425.6 324 68.5
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 1.9e-115 419.9 353 66.3
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 2.5e-115 419.5 353 66.3
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 3.3e-115 419.1 320 71.2
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 2.8e-114 416.0 358 65.4
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 2.8e-114 416.0 501 50.9
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 8.1e-114 414.5 287 75.3
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 7.5e-112 407.9 369 61.0
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 2.2e-111 406.4 254 81.9
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.2e-111 406.4 326 69.0
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 1.1e-110 404.1 324 68.2
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 1.9e-110 403.3 328 67.1
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 3.2e-110 402.5 320 66.9
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 3.2e-110 402.5 349 62.8
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 3.2e-110 402.5 284 73.6
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 9.2e-110 401.0 325 67.7
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 4.6e-109 398.7 346 64.2
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 2.1e-106 389.8 283 72.1
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 2.8e-106 389.4 325 65.2
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 2.4e-105 386.3 309 66.3
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 9.9e-104 380.9 260 75.0
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.9e-103 379.4 326 62.9
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 4.2e-102 375.6 242 78.1
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 2.1e-101 373.2 288 69.8
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 2.3e-100 369.8 321 66.0
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 3.9e-100 369.0 434 52.3
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 1.2e-98 364.0 339 58.1
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.8e-98 362.8 325 60.6
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 6.2e-98 361.7 219 81.7
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 3.6e-90 335.9 307 57.7
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 4.8e-90 335.5 250 68.8
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 6.2e-90 335.1 245 71.4
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.2e-88 330.9 235 72.8
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 1.3e-87 327.4 284 60.6
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 2.3e-84 316.6 309 57.3
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 2.5e-83 313.2 209 77.0
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.1e-75 287.7 339 51.0
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 6.9e-73 278.5 326 49.4
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 7.4e-67 258.5 171 76.6
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 2.8e-66 256.5 247 60.3
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 4.5e-64 249.2 466 38.0
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 2.7e-61 240.0 167 74.3
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.5e-59 234.2 179 67.6
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 3.7e-58 229.6 173 70.5
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 3.4e-56 223.0 330 43.0
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.4e-52 211.1 142 75.4
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 3.0e-52 209.9 144 75.0
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 2.0e-51 207.2 148 73.0
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 4.2e-46 189.5 113 82.3
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 1.5e-43 181.0 132 74.2
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.7e-34 151.0 221 44.8
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.0e-28 131.7 79 86.1
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 2.3e-28 130.6 279 31.5
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 1.1e-25 121.7 68 85.3
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 4.1e-25 119.8 63 92.1
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.2e-24 118.2 63 90.5
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 5.9e-24 115.9 90 66.7
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.9e-23 113.6 66 80.3
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 5.5e-22 109.4 69 82.6
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 1.0e-20 105.1 304 28.3
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.8e-20 104.4 89 62.9
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 3.7e-18 96.7 73 71.2
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.6e-16 91.3 235 28.9
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 5.8e-11 72.8 36 91.7
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 2.4e-09 67.4 39 82.1
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 5.0e-07 59.7 35 77.1


User provided reference genes

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