Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 4.2e-126 454.9 264 100.0
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 8.2e-98 360.9 234 88.5
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 4.1e-89 332.0 265 74.7
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 1.2e-88 330.5 275 71.6
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 2.1e-85 319.7 267 73.8
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 7.5e-75 284.6 222 69.8
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 6.4e-74 281.6 190 76.3
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 2.0e-72 276.6 270 61.9
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 7.8e-72 274.6 177 80.8
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 1.3e-71 273.9 278 61.2
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 1.3e-71 273.9 180 76.7
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 1.3e-71 273.9 156 91.7
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 1.7e-71 273.5 180 78.3
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 1.7e-71 273.5 178 80.3
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 5.0e-71 271.9 231 64.5
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 6.6e-71 271.6 276 61.2
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 8.6e-71 271.2 180 77.8
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 1.1e-70 270.8 272 62.1
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 1.9e-70 270.0 224 65.6
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 1.9e-70 270.0 238 70.6
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 4.3e-70 268.9 270 57.8
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 5.6e-70 268.5 178 76.4
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 1.2e-69 267.3 207 68.6
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 1.6e-69 266.9 180 74.4
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 1.6e-69 266.9 180 75.0
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 1.6e-69 266.9 180 75.6
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 2.1e-69 266.5 178 76.4
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 2.8e-69 266.2 275 59.3
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 3.6e-69 265.8 180 77.2
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 4.7e-69 265.4 180 76.7
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 8.0e-69 264.6 179 74.9
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 1.4e-68 263.8 280 61.1
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 1.4e-68 263.8 181 75.1
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 2.3e-68 263.1 220 66.4
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 2.3e-68 263.1 270 57.4
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 2.3e-68 263.1 179 76.5
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 5.2e-68 261.9 179 73.2
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 6.8e-68 261.5 178 76.4
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 2.0e-67 260.0 251 63.3
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 7.5e-67 258.1 179 74.3
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 9.8e-67 257.7 181 74.6
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 9.8e-67 257.7 212 67.5
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 1.3e-66 257.3 205 65.4
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 2.9e-66 256.1 203 64.5
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 2.9e-66 256.1 207 64.3
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 4.9e-66 255.4 207 63.8
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 2.4e-65 253.1 181 71.3
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 7.0e-65 251.5 179 71.5
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 7.0e-65 251.5 181 71.3
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 1.2e-64 250.8 179 71.5
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 1.2e-64 250.8 181 71.8
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 1.6e-64 250.4 179 70.9
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 2.7e-64 249.6 180 71.7
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 4.6e-64 248.8 173 75.1
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 1.0e-63 247.7 172 74.4
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 1.0e-63 247.7 175 74.9
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 1.3e-63 247.3 182 70.9
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 1.7e-63 246.9 180 72.2
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 2.3e-63 246.5 169 72.8
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 8.6e-63 244.6 254 57.5
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 8.6e-63 244.6 180 70.0
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 1.9e-62 243.4 181 69.1
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 3.3e-62 242.7 182 69.8
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 5.6e-62 241.9 182 70.3
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 5.6e-62 241.9 182 70.3
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 5.6e-62 241.9 182 70.3
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 5.6e-62 241.9 182 70.3
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 5.6e-62 241.9 180 70.0
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 9.5e-62 241.1 180 70.0
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 9.5e-62 241.1 180 69.4
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 1.6e-61 240.4 182 70.3
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 2.1e-61 240.0 180 68.9
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.3e-60 236.5 170 70.0
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 3.1e-60 236.1 166 71.1
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 5.2e-60 235.3 170 69.4
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 6.8e-60 235.0 170 69.4
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 1.3e-58 230.7 165 71.5
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 2.2e-58 229.9 202 63.4
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 6.4e-58 228.4 166 69.3
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 8.3e-58 228.0 227 60.8
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 5.4e-57 225.3 148 76.4
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 5.6e-54 215.3 162 68.5
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 6.2e-53 211.8 147 73.5
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 6.2e-53 211.8 147 76.2
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 1.2e-51 207.6 150 69.3
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 2.9e-50 203.0 207 54.6
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 1.4e-49 200.7 136 76.5
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 1.9e-49 200.3 161 64.0
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 1.0e-47 194.5 155 62.6
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 8.6e-47 191.4 207 54.6
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 4.7e-45 185.7 177 57.1
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 1.4e-44 184.1 202 53.0
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 3.1e-44 183.0 169 58.6
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 2.0e-43 180.3 179 57.5
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 4.2e-41 172.6 121 69.4
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 2.1e-40 170.2 122 68.9
ATR0073G005 Amborella trichopoda HOM05D002102 ORTHO05D008242 3.1e-36 156.4 161 54.0
Duzib132G0691 Durio zibethinus HOM05D002102 ORTHO05D008242 1.2e-35 154.5 170 52.9
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 4.9e-34 149.1 160 50.0
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 4.6e-32 142.5 103 68.9
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 3.0e-31 139.8 126 61.9
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 4.3e-30 136.0 97 66.0
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 2.1e-29 133.7 145 55.2
RcHm_v2.0_Chr5g0021891 Rosa chinensis HOM05D002102 ORTHO05D008242 9.0e-28 128.3 88 70.5
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 5.8e-27 125.6 145 54.5
Actinidia31357 Actinidia chinensis HOM05D002102 ORTHO05D008242 9.3e-25 118.2 86 73.3
RcHm_v2.0_Chr5g0021971 Rosa chinensis HOM05D002102 ORTHO05D008242 1.2e-24 117.9 76 75.0
ATR0109G022 Amborella trichopoda HOM05D002102 ORTHO05D008242 8.7e-23 111.7 86 67.4
CBR_g21832 Chara braunii HOM05D002102 ORTHO05D008242 1.1e-22 111.3 184 41.3
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 4.3e-22 109.4 182 41.2
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 5.6e-22 109.0 89 58.4
Hund01844 Selenicereus undatus HOM05D002102 ORTHO05D008242 1.3e-21 107.8 66 80.3
Eucgr.L03440 Eucalyptus grandis HOM05D002102 ORTHO05D008242 2.1e-21 107.1 67 77.6
A02p28510 Brassica napus HOM05D002102 ORTHO05D008242 2.0e-19 100.5 154 43.5
Actinidia31356 Actinidia chinensis HOM05D002102 ORTHO05D008242 3.4e-19 99.8 111 55.9
BcaC03g16684 Brassica carinata HOM05D002102 ORTHO05D008242 7.1e-17 92.0 71 71.8
MD05G1242600 Malus domestica HOM05D002102 ORTHO05D008242 5.1e-15 85.9 66 68.2
Nitab4.5_0001815g0140 Nicotiana tabacum HOM05D002102 ORTHO05D004119 2.4e-12 77.0 47 80.9
RcHm_v2.0_Chr5g0021961 Rosa chinensis HOM05D002102 ORTHO05D008242 3.1e-12 76.6 62 61.3
Nitab4.5_0007687g0040 Nicotiana tabacum HOM05D002102 ORTHO05D008242 6.9e-12 75.5 43 86.0
BraA02t07887Z Brassica rapa HOM05D002102 ORTHO05D008242 2.6e-11 73.6 106 43.4
RcHm_v2.0_Chr5g0021951 Rosa chinensis HOM05D002102 ORTHO05D008242 2.5e-09 67.0 47 68.1
RcHm_v2.0_Chr5g0021881 Rosa chinensis HOM05D002102 ORTHO05D008242 5.5e-09 65.9 79 46.8


User provided reference genes

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