Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002192g0040 Nicotiana tabacum HOM05D000181 ORTHO05D007950 0.0e+00 1565.8 802 100.0
Nitab4.5_0000100g0290 Nicotiana tabacum HOM05D000181 ORTHO05D007950 0.0e+00 1455.7 803 94.4
Solyc02g032960.2 Solanum lycopersicum HOM05D000181 ORTHO05D007950 0.0e+00 1249.6 810 81.5
Sopen02g011360 Solanum pennellii HOM05D000181 ORTHO05D007950 0.0e+00 1245.7 808 81.4
Peaxi162Scf00363g00727 Petunia axillaris HOM05D000181 ORTHO05D007950 0.0e+00 1213.0 810 79.6
CAN.G1284.1 Capsicum annuum HOM05D000181 ORTHO05D007950 0.0e+00 1161.0 803 77.6
TAR362G0160 Trochodendron aralioides HOM05D000181 ORTHO05D007950 2.7e-261 905.6 723 64.0
Cfa006380 Carpinus fangiana HOM05D000181 ORTHO05D007950 2.3e-260 902.5 726 63.8
Haze_04399 Corylus avellana HOM05D000181 ORTHO05D007950 5.3e-257 891.3 726 63.4
GSVIVG01021791001 Vitis vinifera HOM05D000181 ORTHO05D007950 6.5e-255 884.4 810 58.4
PGR004G1120 Punica granatum HOM05D000181 ORTHO05D007950 3.3e-251 872.1 743 60.7
MSTRG.2063 Avicennia marina HOM05D000181 ORTHO05D007950 1.3e-250 870.2 817 57.2
Sabra13G0044800 Salix brachista HOM05D000181 ORTHO05D007950 1.1e-249 867.1 799 58.8
QL03p029504 Quercus lobata HOM05D000181 ORTHO05D007950 9.1e-249 864.0 777 58.8
SalBow6G6839 Salvia bowleyana HOM05D000181 ORTHO05D007950 1.2e-248 863.6 720 61.9
Sed0008679 Sechium edule HOM05D000181 ORTHO05D007950 3.5e-248 862.1 786 56.7
CiPaw.07G071100 Carya illinoinensis HOM05D000181 ORTHO05D007950 1.1e-246 857.1 726 60.5
Sc16g0009800 Simmondsia chinensis HOM05D000181 ORTHO05D007950 1.5e-246 856.7 797 55.6
Gohir.D11G255200 Gossypium hirsutum HOM05D000181 ORTHO05D007950 1.6e-245 853.2 696 62.6
Gorai.007G273800 Gossypium raimondii HOM05D000181 ORTHO05D007950 1.6e-245 853.2 696 62.6
Prupe.6G352000 Prunus persica HOM05D000181 ORTHO05D007950 2.7e-245 852.4 794 57.9
CANSAT54G2074 Cannabis sativa HOM05D000181 ORTHO05D007950 2.3e-244 849.4 723 60.6
Potri.013G048700 Populus trichocarpa HOM05D000181 ORTHO05D007950 1.5e-243 846.7 759 59.0
MD04G1232400 Malus domestica HOM05D000181 ORTHO05D007950 1.4e-241 840.1 702 61.5
CARHR078520 Cardamine hirsuta HOM05D000181 ORTHO05D007950 4.1e-241 838.6 717 59.8
TWI34G0190 Tripterygium wilfordii HOM05D000181 ORTHO05D007950 4.1e-241 838.6 814 55.5
ClCG03G010030 Citrullus lanatus HOM05D000181 ORTHO05D007950 5.3e-241 838.2 838 54.4
AT3G04340 Arabidopsis thaliana HOM05D000181 ORTHO05D007950 3.5e-240 835.5 737 57.8
Carub.0003s0355 Capsella rubella HOM05D000181 ORTHO05D007950 1.0e-239 833.9 717 59.3
AL3G14330 Arabidopsis lyrata HOM05D000181 ORTHO05D007950 2.2e-239 832.8 717 59.3
Thecc.05G267400 Theobroma cacao HOM05D000181 ORTHO05D007950 8.5e-239 830.9 816 56.2
THA.LOC104827282 Tarenaya hassleriana HOM05D000181 ORTHO05D007950 4.2e-238 828.6 824 54.0
CSS0011745 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007950 1.6e-237 826.6 549 73.6
MBI19_g37398_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007950 1.4e-236 823.5 724 58.6
MELO3C010145.2 Cucumis melo HOM05D000181 ORTHO05D007950 2.8e-234 815.8 727 58.5
Nn4g25637 Nelumbo nucifera HOM05D000181 ORTHO05D007950 2.8e-234 815.8 728 58.5
C05p62850 Brassica napus HOM05D000181 ORTHO05D007950 1.4e-233 813.5 804 54.1
Manes.08G141200 Manihot esculenta HOM05D000181 ORTHO05D007950 9.1e-233 810.8 723 58.9
BcaC05g29949 Brassica carinata HOM05D000181 ORTHO05D007950 1.2e-232 810.4 805 53.7
BolC5t34940H Brassica oleracea HOM05D000181 ORTHO05D007950 1.2e-232 810.4 805 53.7
Thhalv10019907m.g Eutrema salsugineum HOM05D000181 ORTHO05D007950 1.2e-232 810.4 715 58.2
Migut.E00692 Erythranthe guttata HOM05D000181 ORTHO05D007950 4.5e-232 808.5 628 64.5
Lalb_Chr06g0168211 Lupinus albus HOM05D000181 ORTHO05D007950 4.5e-232 808.5 712 57.3
Ciclev10030569m.g Citrus clementina HOM05D000181 ORTHO05D007950 2.5e-230 802.7 619 65.8
Gohir.A11G245300 Gossypium hirsutum HOM05D000181 ORTHO05D007950 5.5e-230 801.6 618 64.4
BcaC05g30203 Brassica carinata HOM05D000181 ORTHO05D007950 7.2e-230 801.2 718 57.5
Sp3g03230 Schrenkiella parvula HOM05D000181 ORTHO05D007950 2.1e-229 799.7 825 52.8
A05p43110 Brassica napus HOM05D000181 ORTHO05D007950 9.8e-227 790.8 804 53.1
BraA05t23054Z Brassica rapa HOM05D000181 ORTHO05D007950 9.8e-227 790.8 804 53.1
Atru.chr2.1070 Acer truncatum HOM05D000181 ORTHO05D007950 2.2e-226 789.6 825 53.9
Glyma.20G227000 Glycine max HOM05D000181 ORTHO05D007950 2.8e-226 789.3 795 53.2
Actinidia04309 Actinidia chinensis HOM05D000181 ORTHO05D007950 4.9e-226 788.5 793 54.6
RcHm_v2.0_Chr3g0449311 Rosa chinensis HOM05D000181 ORTHO05D007950 6.3e-226 788.1 725 56.4
CsaV3_1G045170 Cucumis sativus L. HOM05D000181 ORTHO05D007950 1.6e-224 783.5 731 56.6
Aqoxy2G02791 Aquilegia oxysepala HOM05D000181 ORTHO05D007950 1.7e-223 780.0 725 56.4
arahy.Tifrunner.gnm1.ann1.F7IFNT Arachis hypogaea HOM05D000181 ORTHO05D007950 1.7e-223 780.0 750 53.6
Glyma.10G164800 Glycine max HOM05D000181 ORTHO05D007950 1.1e-222 777.3 796 51.5
Duzib177G0506 Durio zibethinus HOM05D000181 ORTHO05D007950 5.6e-222 775.0 730 57.5
FAN09G4093 Fragaria x ananassa HOM05D000181 ORTHO05D007950 2.8e-221 772.7 796 52.6
Eucgr.H04217 Eucalyptus grandis HOM05D000181 ORTHO05D007950 8.0e-221 771.2 642 60.6
Phvul.L002051 Phaseolus vulgaris HOM05D000181 ORTHO05D007950 1.4e-220 770.4 756 52.9
FAN14G0398 Fragaria x ananassa HOM05D000181 ORTHO05D007950 8.9e-220 767.7 796 53.1
FAN14G4262 Fragaria x ananassa HOM05D000181 ORTHO05D007950 8.9e-220 767.7 796 53.1
PSO210G0470 Papaver somniferum HOM05D000181 ORTHO05D007950 1.3e-218 763.8 725 55.2
CDE12G0825 Ceratophyllum demersum HOM05D000181 ORTHO05D007950 1.7e-218 763.5 674 55.8
Hma1.2p1_1351F.1_g277410 Hydrangea macrophylla HOM05D000181 ORTHO05D007950 3.2e-217 759.2 487 74.9
SGA_v2.0_scaffold8G04660 Striga asiatica HOM05D000181 ORTHO05D007950 9.2e-217 757.7 809 52.8
PSO761G0660 Papaver somniferum HOM05D000181 ORTHO05D007950 1.2e-216 757.3 725 54.8
FvH4_6g01550 Fragaria vesca HOM05D000181 ORTHO05D007950 3.9e-215 752.3 796 52.5
Aa31LG5G14810 Aethionema arabicum HOM05D000181 ORTHO05D007950 3.3e-214 749.2 717 55.1
AUR62006983 Chenopodium quinoa HOM05D000181 ORTHO05D007950 6.2e-213 745.0 722 53.5
Lsat_1_v5_gn_3_35721 Lactuca sativa HOM05D000181 ORTHO05D007950 3.4e-211 739.2 816 51.0
HanXRQChr15g0472161 Helianthus annuus HOM05D000181 ORTHO05D007950 1.7e-210 736.9 814 50.6
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 3.2e-209 732.6 720 53.1
EL10Ac4g09755 Beta vulgaris HOM05D000181 ORTHO05D007950 1.2e-208 730.7 739 51.2
AUR62000630 Chenopodium quinoa HOM05D000181 ORTHO05D007950 6.0e-208 728.4 723 53.3
Lj6A720G54 Lonicera japonica HOM05D000181 ORTHO05D007950 6.0e-208 728.4 726 55.6
Dinv11715 Davidia involucrata HOM05D000181 ORTHO05D007950 3.9e-207 725.7 456 76.8
Cpa.g.sc51.10 Carica papaya HOM05D000181 ORTHO05D007950 1.9e-206 723.4 754 52.8
FAN02G1064 Fragaria x ananassa HOM05D000181 ORTHO05D007950 8.1e-205 718.0 530 65.5
ATR0064G121 Amborella trichopoda HOM05D000181 ORTHO05D007950 1.3e-202 710.7 678 52.7
DCAR_030391 Daucus carota HOM05D000181 ORTHO05D007950 4.3e-198 695.7 580 60.7
arahy.Tifrunner.gnm1.ann1.F17Y7U Arachis hypogaea HOM05D000181 ORTHO05D007950 8.4e-194 681.4 532 61.7
Lj5g0022962 Lotus japonicus HOM05D000181 ORTHO05D007950 1.3e-191 674.1 767 51.1
ECA246G2912 Erigeron canadensis HOM05D000181 ORTHO05D007950 3.2e-185 652.9 611 56.0
VMungo0720G1286 Vigna mungo HOM05D000181 ORTHO05D007950 4.0e-180 636.0 501 59.5
HPP92_003200 Vanilla planifolia HOM05D000181 ORTHO05D007950 2.1e-165 587.0 805 43.9
Medtr1g080430 Medicago truncatula HOM05D000181 ORTHO05D007950 1.4e-145 521.2 805 39.6
Eucgr.E01405 Eucalyptus grandis HOM05D000181 ORTHO05D007950 3.3e-134 483.4 690 43.9
Ca_10026_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007950 3.6e-128 463.4 778 39.2
TPR.G26633 Trifolium pratense HOM05D000181 ORTHO05D007950 2.8e-117 427.2 522 46.7
Psat6g144440 Pisum sativum HOM05D000181 ORTHO05D007950 2.9e-109 400.6 702 36.6
Pp3c3_13130 Physcomitrium patens HOM05D000181 ORTHO05D007950 4.0e-71 273.9 733 29.2
AagrBONN_evm.TU.Sc2ySwM_368.2554 Anthoceros agrestis HOM05D000181 ORTHO05D007950 1.5e-70 271.9 605 30.7
COL.COLO4_15521 Corchorus olitorius HOM05D000181 ORTHO05D007950 2.0e-70 271.6 425 39.5
Pp3c13_19380 Physcomitrium patens HOM05D000181 ORTHO05D007950 7.3e-65 253.1 619 29.7
SMO119G0201 Selaginella moellendorffii HOM05D000181 ORTHO05D007950 1.2e-62 245.7 375 37.6
Mapoly0016s0072 Marchantia polymorpha HOM05D000181 ORTHO05D007950 3.4e-62 244.2 657 29.1
Eucgr.L03323 Eucalyptus grandis HOM05D000181 ORTHO05D007950 1.1e-39 169.5 126 61.9
Hma1.2p1_1351F.1_g277400 Hydrangea macrophylla HOM05D000181 ORTHO05D029155 3.2e-36 157.9 273 42.9
Hma1.2p1_0499F.1_g166750 Hydrangea macrophylla HOM05D000181 ORTHO05D029155 3.0e-34 151.4 329 39.8
SEGI_13250 Sequoiadendron giganteum HOM05D000181 ORTHO05D007950 2.8e-32 144.8 426 27.5
VMungo0720G1461 Vigna mungo HOM05D000181 ORTHO05D029155 1.8e-31 142.1 300 36.7
SEGI_28899 Sequoiadendron giganteum HOM05D000181 ORTHO05D007950 2.9e-29 134.8 231 35.5
Lsat_1_v5_gn_8_150321 Lactuca sativa HOM05D000181 ORTHO05D007950 2.7e-27 128.3 245 41.6
Cpa.g.c36278 Carica papaya HOM05D000181 ORTHO05D007950 1.4e-26 125.9 74 83.8
Gorai.N003100 Gossypium raimondii HOM05D000181 ORTHO05D029806 1.1e-25 122.9 87 63.2
DCAR_015958 Daucus carota HOM05D000038 ORTHO05D000143 4.5e-22 110.9 84 57.1
Gohir.D07G195733 Gossypium hirsutum HOM05D000181 ORTHO05D029806 1.1e-12 79.7 55 60.0
Gohir.D07G166300 Gossypium hirsutum HOM05D000181 ORTHO05D029806 1.5e-12 79.3 54 59.3
Gorai.N004300 Gossypium raimondii HOM05D000181 ORTHO05D029806 2.5e-12 78.6 55 60.0
Psat6g144480 Pisum sativum HOM05D000181 ORTHO05D007950 3.6e-11 74.7 46 78.3


User provided reference genes

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