Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002131g0010 Nicotiana tabacum HOM05D003950 ORTHO05D004697 1.3e-88 330.5 179 100.0
Sopen10g028540 Solanum pennellii HOM05D003950 ORTHO05D004697 1.3e-85 320.5 179 96.6
CAN.G959.52 Capsicum annuum HOM05D003950 ORTHO05D004697 1.1e-84 317.4 179 95.0
Solyc10g076860.2 Solanum lycopersicum HOM05D003950 ORTHO05D004697 1.4e-84 317.0 179 95.5
Nitab4.5_0000121g0060 Nicotiana tabacum HOM05D003950 ORTHO05D004697 1.5e-81 307.0 192 90.1
Cc06_g17190 Coffea canephora HOM05D003950 ORTHO05D004697 1.5e-78 297.0 179 87.7
Hma1.2p1_2382F.1_g321070 Hydrangea macrophylla HOM05D003950 ORTHO05D004697 2.9e-77 292.7 179 87.2
Actinidia03936 Actinidia chinensis HOM05D003950 ORTHO05D004697 8.5e-77 291.2 179 84.9
Dinv25063 Davidia involucrata HOM05D003950 ORTHO05D004697 1.2e-75 287.3 179 85.5
MSTRG.26559 Avicennia marina HOM05D003950 ORTHO05D004697 4.6e-75 285.4 178 82.6
Actinidia37803 Actinidia chinensis HOM05D003950 ORTHO05D004697 6.1e-75 285.0 179 83.8
SGA_v2.0_scaffold31G12791 Striga asiatica HOM05D003950 ORTHO05D004697 1.4e-74 283.9 198 79.3
Lalb_Chr06g0174111 Lupinus albus HOM05D003950 ORTHO05D004697 1.8e-74 283.5 174 86.2
MD12G1008500 Malus domestica HOM05D003950 ORTHO05D004697 2.3e-74 283.1 179 81.6
Migut.J00770 Erythranthe guttata HOM05D003950 ORTHO05D004697 3.0e-74 282.7 177 84.2
Thecc.05G244400 Theobroma cacao HOM05D003950 ORTHO05D004697 3.0e-74 282.7 179 82.7
Rhsim03G0052400 Rhododendron simsii HOM05D003950 ORTHO05D004697 8.8e-74 281.2 175 84.6
arahy.Tifrunner.gnm1.ann1.DJK1GU Arachis hypogaea HOM05D003950 ORTHO05D004697 1.1e-73 280.8 180 83.9
Cfa017695 Carpinus fangiana HOM05D003950 ORTHO05D004697 3.3e-73 279.3 179 81.0
Ca_25687_v3 Cicer arietinum L. HOM05D003950 ORTHO05D004697 2.2e-72 276.6 177 83.1
DCAR_016963 Daucus carota HOM05D003950 ORTHO05D004697 2.8e-72 276.2 179 82.1
Glyma.05G089400 Glycine max HOM05D003950 ORTHO05D004697 2.8e-72 276.2 178 80.9
Haze_20442 Corylus avellana HOM05D003950 ORTHO05D004697 3.7e-72 275.8 173 82.1
GSVIVG01029976001 Vitis vinifera HOM05D003950 ORTHO05D004697 1.8e-71 273.5 180 82.2
Gorai.004G251700 Gossypium raimondii HOM05D003950 ORTHO05D004697 3.1e-71 272.7 179 81.0
Psat1g090600 Pisum sativum HOM05D003950 ORTHO05D004697 3.1e-71 272.7 179 79.9
Lsat_1_v5_gn_1_56021 Lactuca sativa HOM05D003950 ORTHO05D004697 5.3e-71 271.9 179 80.4
Medtr6g027790 Medicago truncatula HOM05D003950 ORTHO05D004697 5.3e-71 271.9 179 80.4
Gohir.D08G236500 Gossypium hirsutum HOM05D003950 ORTHO05D004697 2.0e-70 270.0 175 81.1
Ciclev10021370m.g Citrus clementina HOM05D003950 ORTHO05D004697 2.6e-70 269.6 179 79.9
CSS0049440 Camellia sinensis var. sinensis HOM05D003950 ORTHO05D004697 7.7e-70 268.1 179 79.3
COL.COLO4_28614 Corchorus olitorius HOM05D003950 ORTHO05D004697 7.7e-70 268.1 179 79.9
RcHm_v2.0_Chr3g0496431 Rosa chinensis HOM05D003950 ORTHO05D004697 1.0e-69 267.7 177 80.2
THA.LOC104821454 Tarenaya hassleriana HOM05D003950 ORTHO05D004697 1.0e-69 267.7 179 79.3
Eucgr.A02129 Eucalyptus grandis HOM05D003950 ORTHO05D004697 2.9e-69 266.2 180 78.9
TWI60G1471 Tripterygium wilfordii HOM05D003950 ORTHO05D004697 5.0e-69 265.4 179 76.5
CiPaw.10G125600 Carya illinoinensis HOM05D003950 ORTHO05D004697 4.2e-68 262.3 178 79.2
Gohir.A08G219600 Gossypium hirsutum HOM05D003950 ORTHO05D004697 4.2e-68 262.3 171 78.4
VMungo0464G0013 Vigna mungo HOM05D003950 ORTHO05D004697 7.2e-68 261.5 174 79.3
CsaV3_4G012140 Cucumis sativus L. HOM05D003950 ORTHO05D004697 1.6e-67 260.4 179 78.2
Sed0018840 Sechium edule HOM05D003950 ORTHO05D004697 2.1e-67 260.0 179 78.2
Gohir.A13G164200 Gossypium hirsutum HOM05D003950 ORTHO05D004697 2.7e-67 259.6 179 71.5
Atru.chr2.1469 Acer truncatum HOM05D003950 ORTHO05D004697 3.6e-67 259.2 179 77.7
PSO339G3097 Papaver somniferum HOM05D003950 ORTHO05D004697 3.6e-67 259.2 183 79.2
Phvul.004G074000 Phaseolus vulgaris HOM05D003950 ORTHO05D004697 3.6e-67 259.2 179 78.8
ECA248G3680 Erigeron canadensis HOM05D003950 ORTHO05D004697 4.7e-67 258.8 179 77.1
Manes.09G138000 Manihot esculenta HOM05D003950 ORTHO05D004697 2.3e-66 256.5 168 80.4
ClCG04G005440 Citrullus lanatus HOM05D003950 ORTHO05D004697 3.9e-66 255.8 179 77.7
MSTRG.10428 Avicennia marina HOM05D003950 ORTHO05D004697 1.1e-65 254.2 163 81.0
HanXRQChr01g0026431 Helianthus annuus HOM05D003950 ORTHO05D004697 1.1e-65 254.2 178 76.4
FvH4_1g28440 Fragaria vesca HOM05D003950 ORTHO05D004697 4.4e-65 252.3 177 77.4
CARHR268340 Cardamine hirsuta HOM05D003950 ORTHO05D004697 7.4e-65 251.5 179 74.9
Potri.019G038400 Populus trichocarpa HOM05D003950 ORTHO05D004697 9.7e-65 251.1 179 74.3
MELO3C008816.2 Cucumis melo HOM05D003950 ORTHO05D004697 2.2e-64 250.0 178 77.0
CSS0011085 Camellia sinensis var. sinensis HOM05D003950 ORTHO05D004697 3.7e-64 249.2 217 65.4
CANSAT78G2427 Cannabis sativa HOM05D003950 ORTHO05D004697 1.1e-63 247.7 179 74.3
Thhalv10014237m.g Eutrema salsugineum HOM05D003950 ORTHO05D004697 1.4e-63 247.3 179 76.0
arahy.Tifrunner.gnm1.ann1.3ZLA4U Arachis hypogaea HOM05D001335 ORTHO05D001184 5.3e-63 245.4 183 75.4
QL07p017761 Quercus lobata HOM05D003950 ORTHO05D004697 1.6e-62 243.8 163 79.8
Gorai.013G195400 Gossypium raimondii HOM05D003950 ORTHO05D004697 2.6e-62 243.0 190 71.1
Sp6g16940 Schrenkiella parvula HOM05D003950 ORTHO05D004697 1.3e-61 240.7 179 72.6
Hund15115 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.3e-61 240.7 202 60.9
AL8G30470 Arabidopsis lyrata HOM05D003950 ORTHO05D004697 1.1e-60 237.7 171 76.0
TPR.G29869 Trifolium pratense HOM05D003950 ORTHO05D004697 2.5e-60 236.5 162 78.4
A03p14340 Brassica napus HOM05D003950 ORTHO05D004697 4.2e-60 235.7 178 72.5
BraA03t10731Z Brassica rapa HOM05D003950 ORTHO05D004697 4.2e-60 235.7 178 72.5
BcaC01g06335 Brassica carinata HOM05D003950 ORTHO05D004697 9.4e-60 234.6 179 72.1
BolC3t14092H Brassica oleracea HOM05D003950 ORTHO05D004697 1.6e-59 233.8 179 71.5
AT5G55000 Arabidopsis thaliana HOM05D003950 ORTHO05D004697 2.1e-59 233.4 169 75.1
FAN23G1412 Fragaria x ananassa HOM05D003950 ORTHO05D004697 2.7e-59 233.0 168 76.2
vmacro07558 Vaccinium macrocarpon HOM05D003950 ORTHO05D004697 4.7e-59 232.3 155 80.6
Cpa.g.sc161.15 Carica papaya HOM05D003950 ORTHO05D004697 6.1e-59 231.9 179 72.6
Dinv05569 Davidia involucrata HOM05D003950 ORTHO05D004697 6.1e-59 231.9 153 81.7
CANSAT78G2379 Cannabis sativa HOM05D003950 ORTHO05D004697 6.7e-58 228.4 152 78.9
C03p16720 Brassica napus HOM05D003950 ORTHO05D004697 8.8e-58 228.0 179 69.8
Nn6g32388 Nelumbo nucifera HOM05D003950 ORTHO05D004697 2.0e-57 226.9 179 72.6
Carub.0008s1529 Capsella rubella HOM05D003950 ORTHO05D004697 2.6e-57 226.5 171 73.1
TAR623G1392 Trochodendron aralioides HOM05D003950 ORTHO05D004697 2.2e-56 223.4 150 80.7
MD14G1005800 Malus domestica HOM05D003950 ORTHO05D004697 2.8e-56 223.0 146 80.1
Potri.013G062500 Populus trichocarpa HOM05D003950 ORTHO05D004697 4.8e-56 222.2 179 68.7
HanXRQChr11g0347981 Helianthus annuus HOM05D003950 ORTHO05D004697 7.0e-55 218.4 181 68.0
Aqoxy1G00539 Aquilegia oxysepala HOM05D003950 ORTHO05D004697 3.8e-53 212.6 157 75.8
ATR0697G272 Amborella trichopoda HOM05D003950 ORTHO05D004697 8.5e-53 211.5 152 73.0
CDE07G1488 Ceratophyllum demersum HOM05D003950 ORTHO05D004697 8.5e-53 211.5 178 66.9
FAN28G2715 Fragaria x ananassa HOM05D003950 ORTHO05D004697 1.9e-52 210.3 153 76.5
Sabra19G0049600 Salix brachista HOM05D003950 ORTHO05D004697 2.5e-52 209.9 171 59.6
EL10Ac1g01242 Beta vulgaris HOM05D003950 ORTHO05D004697 3.2e-52 209.5 143 78.3
Aa31LG2G1860 Aethionema arabicum HOM05D003950 ORTHO05D004697 4.7e-51 205.7 204 61.3
unitig_899.g15193 Utricularia gibba HOM05D003950 ORTHO05D004697 4.7e-51 205.7 167 70.7
Sc07g0007800 Simmondsia chinensis HOM05D003950 ORTHO05D004697 6.1e-51 205.3 119 79.0
AUR62027738 Chenopodium quinoa HOM05D003950 ORTHO05D004697 4.0e-50 202.6 143 78.3
Duzib177G0442 Durio zibethinus HOM05D003950 ORTHO05D004697 4.0e-50 202.6 178 59.0
CDE06G0557 Ceratophyllum demersum HOM05D003950 ORTHO05D004697 1.5e-49 200.7 179 64.8
SalBow3G0657 Salvia bowleyana HOM05D003950 ORTHO05D004697 2.0e-49 200.3 119 75.6
Prupe.7G009900 Prunus persica HOM05D003950 ORTHO05D004697 4.8e-48 195.7 130 81.5
HanXRQChr11g0348261 Helianthus annuus HOM05D003950 ORTHO05D004697 8.3e-48 194.9 173 59.5
PSO384G0364 Papaver somniferum HOM05D003950 ORTHO05D004697 1.8e-47 193.7 179 58.1
Sabra13G0055700 Salix brachista HOM05D003950 ORTHO05D004697 5.0e-45 185.7 219 46.1
AUR62018910 Chenopodium quinoa HOM05D003950 ORTHO05D004697 6.5e-45 185.3 173 64.2
Zm00001eb403220 Zea mays HOM05D003950 ORTHO05D004697 1.9e-44 183.7 160 67.5
Gohir.D13G167037 Gossypium hirsutum HOM05D003950 ORTHO05D004697 3.2e-44 183.0 121 68.6
FAN17G2887 Fragaria x ananassa HOM05D003950 ORTHO05D004697 3.0e-42 176.4 160 60.6
HanXRQChr11g0348201 Helianthus annuus HOM05D003950 ORTHO05D004697 3.0e-42 176.4 166 56.6
Lj1A1064G32 Lonicera japonica HOM05D003950 ORTHO05D004697 3.0e-42 176.4 192 50.0
Os10g0438000 Oryza sativa ssp. japonica HOM05D003950 ORTHO05D004697 5.2e-42 175.6 182 58.8
HanXRQChr11g0348521 Helianthus annuus HOM05D003950 ORTHO05D004697 2.6e-41 173.3 165 61.2
AagrBONN_evm.TU.Sc2ySwM_344.2926 Anthoceros agrestis HOM05D003950 ORTHO05D004697 5.7e-41 172.2 179 56.4
SMO239G0197 Selaginella moellendorffii HOM05D003950 ORTHO05D004697 1.3e-40 171.0 181 55.2
BcaC01g06337 Brassica carinata HOM05D003950 ORTHO05D004697 3.1e-39 166.4 119 66.4
MD03G1047000 Malus domestica HOM05D003950 ORTHO05D004697 4.1e-39 166.0 150 66.7
Os03g0157500 Oryza sativa ssp. japonica HOM05D003950 ORTHO05D004697 4.1e-39 166.0 119 64.7
HPP92_027838 Vanilla planifolia HOM05D003950 ORTHO05D004697 7.0e-39 165.2 119 68.1
Gohir.A08G219522 Gossypium hirsutum HOM05D003950 ORTHO05D004697 9.2e-39 164.9 179 50.8
MD03G1043800 Malus domestica HOM05D003950 ORTHO05D004697 2.0e-38 163.7 156 53.2
MD03G1043900 Malus domestica HOM05D003950 ORTHO05D004697 6.6e-37 158.7 170 58.8
HanXRQChr11g0348221 Helianthus annuus HOM05D003950 ORTHO05D004697 1.1e-36 157.9 123 65.0
MD03G1044000 Malus domestica HOM05D003950 ORTHO05D004697 1.9e-36 157.1 159 61.0
RcHm_v2.0_Chr5g0074451 Rosa chinensis HOM05D003950 ORTHO05D004697 1.9e-36 157.1 161 54.7
MD11G1047200 Malus domestica HOM05D003950 ORTHO05D004697 7.3e-36 155.2 142 63.4
HanXRQChr11g0348211 Helianthus annuus HOM05D003950 ORTHO05D004697 2.8e-35 153.3 152 61.8
HanXRQChr11g0348281 Helianthus annuus HOM05D003950 ORTHO05D004697 3.6e-35 152.9 170 59.4
HanXRQChr11g0347961 Helianthus annuus HOM05D003950 ORTHO05D004697 4.7e-35 152.5 136 66.9
Pp3c19_3550 Physcomitrium patens HOM05D003950 ORTHO05D004697 4.0e-34 149.4 118 57.6
HanXRQChr11g0347991 Helianthus annuus HOM05D003950 ORTHO05D004697 8.9e-34 148.3 110 63.6
Prupe.6G036000 Prunus persica HOM05D003950 ORTHO05D004697 1.7e-32 144.1 150 61.3
HanXRQChr11g0347971 Helianthus annuus HOM05D003950 ORTHO05D004697 2.2e-32 143.7 113 64.6
HanXRQChr11g0347951 Helianthus annuus HOM05D003950 ORTHO05D004697 2.9e-32 143.3 116 61.2
AUR62043941 Chenopodium quinoa HOM05D003950 ORTHO05D004697 1.2e-30 137.9 133 65.4
FvH4_4g13720 Fragaria vesca HOM05D003950 ORTHO05D004697 1.3e-29 134.4 149 59.7
FAN11G3501 Fragaria x ananassa HOM05D003950 ORTHO05D004697 8.6e-29 131.7 147 48.3
Mapoly0001s0409 Marchantia polymorpha HOM05D003950 ORTHO05D004697 1.5e-28 131.0 148 57.4
FAN11G2374 Fragaria x ananassa HOM05D003950 ORTHO05D004697 1.9e-28 130.6 142 48.6
FvH4_3g41510 Fragaria vesca HOM05D003950 ORTHO05D004697 7.3e-28 128.6 142 48.6
FAN25G1848 Fragaria x ananassa HOM05D003950 ORTHO05D004697 7.3e-28 128.6 134 52.2
FvH4_3g41490 Fragaria vesca HOM05D003950 ORTHO05D004697 2.1e-27 127.1 140 47.9
FvH4_6g31590 Fragaria vesca HOM05D003950 ORTHO05D004697 4.7e-27 125.9 108 53.7
FAN19G2544 Fragaria x ananassa HOM05D003950 ORTHO05D004697 4.7e-27 125.9 86 73.3
FAN21G2807 Fragaria x ananassa HOM05D003950 ORTHO05D004697 1.8e-26 124.0 133 49.6
arahy.Tifrunner.gnm1.ann1.Y4106G Arachis hypogaea HOM05D003950 ORTHO05D004697 8.9e-26 121.7 78 74.4
arahy.Tifrunner.gnm1.ann1.NAY1Y6 Arachis hypogaea HOM05D003950 ORTHO05D004697 1.3e-24 117.9 78 71.8
FAN05G4552 Fragaria x ananassa HOM05D003950 ORTHO05D004697 1.7e-24 117.5 178 42.1
arahy.Tifrunner.gnm1.ann1.045CRL Arachis hypogaea HOM05D003950 ORTHO05D004697 7.0e-23 112.1 87 63.2
FAN13G1636 Fragaria x ananassa HOM05D003950 ORTHO05D004697 2.3e-21 107.1 167 38.9
arahy.Tifrunner.gnm1.ann1.F7GYSS Arachis hypogaea HOM05D003950 ORTHO05D004697 8.6e-21 105.1 65 75.4
SEGI_36015 Sequoiadendron giganteum HOM05D003950 ORTHO05D004697 1.5e-20 104.4 92 55.4
SEGI_22625 Sequoiadendron giganteum HOM05D003950 ORTHO05D004697 8.9e-18 95.1 74 58.1
RcHm_v2.0_Chr5g0074461 Rosa chinensis HOM05D003950 ORTHO05D004697 2.0e-17 94.0 66 63.6
Pp3c22_8540 Physcomitrium patens HOM05D003950 ORTHO05D004697 3.4e-17 93.2 140 40.0
MD03G1035600 Malus domestica HOM05D003950 ORTHO05D004697 2.9e-16 90.1 162 46.3
FvH4_3g41240 Fragaria vesca HOM05D003950 ORTHO05D004697 1.1e-15 88.2 85 49.4
FAN11G3220 Fragaria x ananassa HOM05D003950 ORTHO05D004697 1.1e-15 88.2 85 49.4
Pp3c19_20680 Physcomitrium patens HOM05D003950 ORTHO05D004697 1.4e-15 87.8 97 46.4
arahy.Tifrunner.gnm1.ann1.ZT0L0Q Arachis hypogaea HOM05D003950 ORTHO05D004697 5.4e-15 85.9 55 70.9
Pp3c22_8500 Physcomitrium patens HOM05D003950 ORTHO05D004697 1.6e-14 84.3 151 39.7
arahy.Tifrunner.gnm1.ann1.FD1PW0 Arachis hypogaea HOM05D000879 ORTHO05D004697 6.0e-14 82.4 55 67.3
Pp3c3_29270 Physcomitrium patens HOM05D003950 ORTHO05D004697 1.0e-13 81.6 188 38.3
Lsat_1_v5_gn_9_112501 Lactuca sativa HOM05D003950 ORTHO05D004697 3.0e-13 80.1 113 42.5
Gohir.A07G127733 Gossypium hirsutum HOM05D003950 ORTHO05D004697 1.9e-12 77.4 45 80.0
RcHm_v2.0_Chr5g0074441 Rosa chinensis HOM05D003950 ORTHO05D004697 2.5e-12 77.0 78 51.3
Pp3c22_3970 Physcomitrium patens HOM05D003950 ORTHO05D004697 1.6e-11 74.3 125 40.0
Pp3c22_8490 Physcomitrium patens HOM05D003950 ORTHO05D004697 5.8e-09 65.9 55 54.5
HanXRQChr11g0348271 Helianthus annuus HOM05D003950 ORTHO05D004697 7.6e-09 65.5 78 50.0
FAN13G2151 Fragaria x ananassa HOM05D003950 ORTHO05D004697 3.8e-08 63.2 58 50.0
CBR_g23172 Chara braunii HOM05D003950 ORTHO05D004697 1.1e-07 61.6 97 42.3
FAN12G1843 Fragaria x ananassa HOM05D003950 ORTHO05D004697 3.5e-06 56.6 142 30.3
Pp3c8_19020 Physcomitrium patens HOM05D003950 ORTHO05D004697 3.5e-06 56.6 60 48.3


User provided reference genes

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