Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002123g0050 Nicotiana tabacum HOM05D005112 ORTHO05D006681 3.4e-111 404.8 183 100.0
Sopen08g005470 Solanum pennellii HOM05D005112 ORTHO05D006681 2.9e-86 322.0 156 91.0
Peaxi162Scf00767g00521 Petunia axillaris HOM05D005112 ORTHO05D006681 3.8e-86 321.6 156 91.7
Solyc08g014480.4 Solanum lycopersicum HOM05D005112 ORTHO05D006681 6.5e-86 320.9 156 90.4
CAN.G176.1 Capsicum annuum HOM05D005112 ORTHO05D006681 6.8e-83 310.8 156 88.5
MSTRG.20515 Avicennia marina HOM05D005112 ORTHO05D006681 5.8e-74 281.2 156 78.8
Dinv32028 Davidia involucrata HOM05D005112 ORTHO05D006681 7.5e-74 280.8 156 78.8
Hma1.2p1_1202F.1_g266810 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 2.2e-73 279.3 156 75.6
GSVIVG01013489001 Vitis vinifera HOM05D005112 ORTHO05D006681 2.2e-73 279.3 156 75.6
vmacro12695 Vaccinium macrocarpon HOM05D005112 ORTHO05D006681 2.9e-73 278.9 156 75.0
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 3.7e-73 278.5 156 76.3
Cc02_g30230 Coffea canephora HOM05D005112 ORTHO05D006681 8.3e-73 277.3 156 76.9
DCAR_006636 Daucus carota HOM05D005112 ORTHO05D006681 1.4e-72 276.6 156 76.9
CSS0041800 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 4.1e-72 275.0 158 73.4
Actinidia02264 Actinidia chinensis HOM05D005112 ORTHO05D006681 7.0e-72 274.2 156 75.0
SGA_v2.0_scaffold124G33611 Striga asiatica HOM05D005112 ORTHO05D006681 1.7e-70 269.6 156 75.6
Sabra03G0146500 Salix brachista HOM05D005112 ORTHO05D006681 3.9e-70 268.5 156 73.7
Ciclev10030068m.g Citrus clementina HOM05D005112 ORTHO05D006681 5.0e-70 268.1 156 74.4
Lsat_1_v5_gn_2_64381 Lactuca sativa HOM05D005112 ORTHO05D006681 5.0e-70 268.1 156 75.6
Gohir.A06G175300 Gossypium hirsutum HOM05D005112 ORTHO05D006681 6.6e-70 267.7 156 74.4
Gorai.010G216500 Gossypium raimondii HOM05D005112 ORTHO05D006681 6.6e-70 267.7 156 74.4
Gohir.D06G185100 Gossypium hirsutum HOM05D005112 ORTHO05D006681 1.5e-69 266.5 156 73.7
Potri.001G027400 Populus trichocarpa HOM05D005112 ORTHO05D006681 1.5e-69 266.5 156 73.7
Thecc.10G157000 Theobroma cacao HOM05D005112 ORTHO05D006681 1.5e-69 266.5 156 72.4
Atru.chr12.1339 Acer truncatum HOM05D005112 ORTHO05D006681 1.9e-69 266.2 156 73.1
ECA238G0687 Erigeron canadensis HOM05D005112 ORTHO05D006681 1.9e-69 266.2 156 74.4
MBI09_g12849_MAGBIO Magnolia biondii HOM05D005112 ORTHO05D006681 1.9e-69 266.2 156 71.8
HanXRQChr14g0446561 Helianthus annuus HOM05D005112 ORTHO05D006681 4.3e-69 265.0 156 72.4
Sc14g0005780 Simmondsia chinensis HOM05D005112 ORTHO05D006681 5.6e-69 264.6 156 73.1
CARHR164340 Cardamine hirsuta HOM05D005112 ORTHO05D006681 7.3e-69 264.2 156 71.8
Lj9C664G6 Lonicera japonica HOM05D005112 ORTHO05D006681 7.3e-69 264.2 158 75.9
Aqoxy2G00366 Aquilegia oxysepala HOM05D005112 ORTHO05D006681 1.6e-68 263.1 156 70.5
PSO339G5424 Papaver somniferum HOM05D005112 ORTHO05D006681 1.6e-68 263.1 156 71.2
Potri.003G196500 Populus trichocarpa HOM05D005112 ORTHO05D006681 1.6e-68 263.1 156 72.4
Prupe.2G035800 Prunus persica HOM05D005112 ORTHO05D006681 1.6e-68 263.1 156 72.4
Manes.04G159700 Manihot esculenta HOM05D005112 ORTHO05D006681 2.8e-68 262.3 156 73.7
Sabra01G0019900 Salix brachista HOM05D005112 ORTHO05D006681 3.6e-68 261.9 156 71.2
THA.LOC104824194 Tarenaya hassleriana HOM05D005112 ORTHO05D006681 4.7e-68 261.5 156 71.2
TAR636G0412 Trochodendron aralioides HOM05D005112 ORTHO05D006681 4.7e-68 261.5 156 71.8
CiPaw.13G013600 Carya illinoinensis HOM05D005112 ORTHO05D006681 6.2e-68 261.2 156 70.5
Nn7g36668 Nelumbo nucifera HOM05D005112 ORTHO05D006681 1.1e-67 260.4 156 71.8
Carub.0005s2104 Capsella rubella HOM05D005112 ORTHO05D006681 1.8e-67 259.6 156 69.9
Duzib114G0621 Durio zibethinus HOM05D005112 ORTHO05D006681 2.3e-67 259.2 156 71.2
TWI38G0195 Tripterygium wilfordii HOM05D005112 ORTHO05D006681 2.3e-67 259.2 156 69.2
BraA04t16238Z Brassica rapa HOM05D005112 ORTHO05D006681 3.1e-67 258.8 156 70.5
COL.COLO4_20752 Corchorus olitorius HOM05D005112 ORTHO05D006681 3.1e-67 258.8 156 71.8
FAN03G1408 Fragaria x ananassa HOM05D005112 ORTHO05D006681 3.1e-67 258.8 156 70.5
Prupe.2G035600 Prunus persica HOM05D005112 ORTHO05D006681 3.1e-67 258.8 156 71.8
unitig_22.g5425 Utricularia gibba HOM05D005112 ORTHO05D006681 3.1e-67 258.8 156 68.6
BcaB02g08488 Brassica carinata HOM05D005112 ORTHO05D006681 4.0e-67 258.5 156 70.5
BcaC02g09069 Brassica carinata HOM05D005112 ORTHO05D006681 4.0e-67 258.5 156 70.5
A04p05380 Brassica napus HOM05D005112 ORTHO05D006681 4.0e-67 258.5 156 70.5
C04p38070 Brassica napus HOM05D005112 ORTHO05D006681 4.0e-67 258.5 156 70.5
ATR0745G067 Amborella trichopoda HOM05D005112 ORTHO05D006681 5.2e-67 258.1 156 69.9
PGR044G1764 Punica granatum HOM05D005112 ORTHO05D006681 5.2e-67 258.1 156 69.2
Eucgr.J01181 Eucalyptus grandis HOM05D005112 ORTHO05D006681 8.9e-67 257.3 156 69.9
Thhalv10010080m.g Eutrema salsugineum HOM05D005112 ORTHO05D006681 8.9e-67 257.3 156 70.5
FvH4_7g03060 Fragaria vesca HOM05D005112 ORTHO05D006681 8.9e-67 257.3 156 69.9
MD02G1287500 Malus domestica HOM05D005112 ORTHO05D006681 1.2e-66 256.9 156 71.8
Glyma.13G197000 Glycine max HOM05D005112 ORTHO05D006681 1.5e-66 256.5 156 67.9
AL5G35490 Arabidopsis lyrata HOM05D005112 ORTHO05D006681 2.0e-66 256.1 157 68.8
BolC4t25382H Brassica oleracea HOM05D005112 ORTHO05D006681 2.0e-66 256.1 155 70.3
Sp5g07980 Schrenkiella parvula HOM05D005112 ORTHO05D006681 2.0e-66 256.1 156 69.2
VMungo1127G0803 Vigna mungo HOM05D005112 ORTHO05D006681 2.0e-66 256.1 156 69.2
CANSAT56G3144 Cannabis sativa HOM05D005112 ORTHO05D006681 2.6e-66 255.8 168 65.5
ClCG05G026800 Citrullus lanatus HOM05D005112 ORTHO05D006681 2.6e-66 255.8 156 69.2
AT3G54440 Arabidopsis thaliana HOM05D005112 ORTHO05D006681 3.4e-66 255.4 157 68.8
Sed0008595 Sechium edule HOM05D005112 ORTHO05D006681 4.4e-66 255.0 157 69.4
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 5.8e-66 254.6 158 68.4
CsaV3_5G036760 Cucumis sativus L. HOM05D005112 ORTHO05D006681 5.8e-66 254.6 156 69.2
Ca_23958_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 9.8e-66 253.8 156 68.6
Phvul.011G206800 Phaseolus vulgaris HOM05D005112 ORTHO05D006681 1.3e-65 253.4 156 67.9
arahy.Tifrunner.gnm1.ann1.2RH035 Arachis hypogaea HOM05D005112 ORTHO05D006681 1.7e-65 253.1 156 69.9
Aa31LG10G13430 Aethionema arabicum HOM05D005112 ORTHO05D006681 3.7e-65 251.9 156 67.9
Lj3g0016153 Lotus japonicus HOM05D005112 ORTHO05D006681 6.4e-65 251.1 156 67.9
RcHm_v2.0_Chr1g0324261 Rosa chinensis HOM05D005112 ORTHO05D006681 6.4e-65 251.1 156 69.9
arahy.Tifrunner.gnm1.ann1.LQLC9G Arachis hypogaea HOM05D005112 ORTHO05D006681 8.3e-65 250.8 155 69.7
MELO3C012472.2 Cucumis melo HOM05D005112 ORTHO05D006681 8.3e-65 250.8 156 67.9
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 8.3e-65 250.8 153 69.3
Medtr8g039160 Medicago truncatula HOM05D005112 ORTHO05D006681 3.2e-64 248.8 156 68.6
Psat4g144800 Pisum sativum HOM05D005112 ORTHO05D006681 7.0e-64 247.7 156 67.9
Lalb_Chr01g0007751 Lupinus albus HOM05D005112 ORTHO05D006681 1.2e-63 246.9 156 68.6
QL04p017903 Quercus lobata HOM05D005112 ORTHO05D006681 1.2e-63 246.9 153 69.3
Hund27779 Selenicereus undatus HOM05D005112 ORTHO05D006681 2.7e-63 245.7 156 68.6
Os01g0952600 Oryza sativa ssp. japonica HOM05D005112 ORTHO05D006681 3.5e-63 245.4 156 67.3
Hund27782 Selenicereus undatus HOM05D005112 ORTHO05D006681 3.5e-63 245.4 156 67.9
EL10Ac2g02802 Beta vulgaris HOM05D005112 ORTHO05D006681 1.0e-62 243.8 156 67.9
TPR.G27820 Trifolium pratense HOM05D005112 ORTHO05D006681 1.3e-62 243.4 157 66.9
FAN10G2928 Fragaria x ananassa HOM05D005112 ORTHO05D006681 2.3e-62 242.7 153 68.0
AUR62026862 Chenopodium quinoa HOM05D005112 ORTHO05D006681 3.3e-61 238.8 156 66.7
AUR62032651 Chenopodium quinoa HOM05D005112 ORTHO05D006681 5.6e-61 238.0 156 66.7
Zm00001eb140720 Zea mays HOM05D005112 ORTHO05D006681 6.8e-59 231.1 155 64.5
RcHm_v2.0_Chr1g0324211 Rosa chinensis HOM05D005112 ORTHO05D006681 8.9e-59 230.7 156 66.0
Cpa.g.sc540.4 Carica papaya HOM05D005112 ORTHO05D006681 2.9e-57 225.7 130 72.3
Pp3c7_1630 Physcomitrium patens HOM05D005112 ORTHO05D006681 3.2e-56 222.2 156 58.3
Mapoly0086s0033 Marchantia polymorpha HOM05D005112 ORTHO05D006681 5.1e-54 214.9 155 58.7
SMO266G0060 Selaginella moellendorffii HOM05D005112 ORTHO05D006681 1.5e-53 213.4 152 61.8
HPP92_012095 Vanilla planifolia HOM05D005112 ORTHO05D006681 2.1e-52 209.5 156 59.0
AagrBONN_evm.TU.Sc2ySwM_368.212 Anthoceros agrestis HOM05D005112 ORTHO05D006681 2.1e-47 193.0 156 56.4
Nitab4.5_0000013g0140 Nicotiana tabacum HOM05D005112 ORTHO05D006681 1.9e-40 169.9 75 97.3
Cfa010916 Carpinus fangiana HOM05D005112 ORTHO05D006681 3.8e-33 145.6 75 81.3
SEGI_07313 Sequoiadendron giganteum HOM05D005112 ORTHO05D006681 1.3e-30 137.1 82 70.7
Haze_03042 Corylus avellana HOM05D005112 ORTHO05D006681 2.3e-30 136.3 153 47.7
Migut.B01228 Erythranthe guttata HOM05D005112 ORTHO05D006681 2.3e-30 136.3 70 80.0
Hma1.2p1_1202F.1_g266800 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 4.3e-29 132.1 80 70.0
CSS0018226 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 7.4e-29 131.3 86 65.1
Oeu042660.1 Olea europaea HOM05D005112 ORTHO05D006681 2.1e-28 129.8 70 75.7
MCO01G649 Micromonas commoda HOM05D005112 ORTHO05D006681 3.7e-28 129.0 155 43.9
MD07G1039900 Malus domestica HOM05D005112 ORTHO05D006681 9.9e-26 120.9 80 66.2
SEGI_07839 Sequoiadendron giganteum HOM05D005112 ORTHO05D006681 3.0e-22 109.4 80 57.5
Cre08.g379450 Chlamydomonas reinhardtii HOM05D005112 ORTHO05D006681 2.5e-21 106.3 115 47.8
CBR_g32018 Chara braunii HOM05D005112 ORTHO05D006681 4.9e-17 92.0 157 35.7
unitig_22.g5418 Utricularia gibba HOM05D003814 ORTHO05D004399 8.4e-17 91.3 99 44.4
Actinidia21519 Actinidia chinensis HOM05D000850 ORTHO05D000266 4.8e-12 75.5 56 55.4
CSS0027518 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D111919 1.6e-07 60.5 31 83.9
CAN.G33.10 Capsicum annuum HOM05D001402 ORTHO05D115258 1.4e-06 57.4 48 62.5


User provided reference genes

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