Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002096g0060 Nicotiana tabacum HOM05D000811 ORTHO05D004743 5.6e-36 153.7 74 100.0
CAN.G1329.5 Capsicum annuum HOM05D000811 ORTHO05D004743 5.3e-26 120.6 119 56.3
Solyc01g110530.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 9.0e-26 119.8 119 56.3
Sopen01g052660 Solanum pennellii HOM05D000811 ORTHO05D004743 9.0e-26 119.8 119 56.3
TAR628G0680 Trochodendron aralioides HOM05D000811 ORTHO05D004743 2.0e-25 118.6 119 54.6
Nitab4.5_0010885g0050 Nicotiana tabacum HOM05D000811 ORTHO05D004743 2.6e-25 118.2 93 69.9
Duzib147G0350 Durio zibethinus HOM05D000811 ORTHO05D004743 4.4e-25 117.5 118 55.9
Dinv40074 Davidia involucrata HOM05D000811 ORTHO05D004743 5.8e-25 117.1 118 54.2
PGR102G1785 Punica granatum HOM05D000811 ORTHO05D004743 7.6e-25 116.7 118 55.1
Manes.01G144800 Manihot esculenta HOM05D000811 ORTHO05D004743 1.3e-24 115.9 117 56.4
PGSC0003DMG400001617 Solanum tuberosum HOM05D000811 ORTHO05D004743 1.3e-24 115.9 119 55.5
Eucgr.J02408 Eucalyptus grandis HOM05D000811 ORTHO05D004743 1.7e-24 115.5 118 55.9
Gohir.D10G090300 Gossypium hirsutum HOM05D000811 ORTHO05D004743 1.7e-24 115.5 117 53.8
Gorai.011G099300 Gossypium raimondii HOM05D000811 ORTHO05D004743 1.7e-24 115.5 117 53.8
Manes.02G103000 Manihot esculenta HOM05D000811 ORTHO05D004743 1.7e-24 115.5 118 54.2
Potri.007G013400 Populus trichocarpa HOM05D000811 ORTHO05D004743 1.7e-24 115.5 118 55.9
Thecc.01G020900 Theobroma cacao HOM05D000811 ORTHO05D004743 1.7e-24 115.5 118 54.2
Aqoxy5G01449 Aquilegia oxysepala HOM05D000811 ORTHO05D004743 2.2e-24 115.2 119 53.8
QL06p033570 Quercus lobata HOM05D000811 ORTHO05D004743 2.2e-24 115.2 116 54.3
Rhsim05G0067500 Rhododendron simsii HOM05D000811 ORTHO05D004743 2.2e-24 115.2 119 52.9
TWI09G0609 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 2.2e-24 115.2 118 55.9
Cpa.g.sc6.231 Carica papaya HOM05D000811 ORTHO05D004743 2.9e-24 114.8 118 54.2
COL.COLO4_21930 Corchorus olitorius HOM05D000811 ORTHO05D004743 2.9e-24 114.8 118 54.2
Duzib187G1507 Durio zibethinus HOM05D000811 ORTHO05D004743 3.8e-24 114.4 118 53.4
TAR376G0878 Trochodendron aralioides HOM05D000811 ORTHO05D004743 3.8e-24 114.4 119 53.8
CSS0015066 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 4.9e-24 114.0 119 52.9
CSS0031839 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 4.9e-24 114.0 119 52.9
CiPaw.08G132800 Carya illinoinensis HOM05D000811 ORTHO05D004743 4.9e-24 114.0 117 54.7
Dinv33618 Davidia involucrata HOM05D000811 ORTHO05D004743 4.9e-24 114.0 119 52.9
Gohir.D11G044800 Gossypium hirsutum HOM05D000811 ORTHO05D004743 4.9e-24 114.0 118 53.4
Gorai.007G048100 Gossypium raimondii HOM05D000811 ORTHO05D004743 4.9e-24 114.0 118 53.4
Oeu060412.1 Olea europaea HOM05D000811 ORTHO05D004743 4.9e-24 114.0 120 54.2
TAR381G1630 Trochodendron aralioides HOM05D000811 ORTHO05D004743 4.9e-24 114.0 119 52.1
TAR625G0006 Trochodendron aralioides HOM05D000811 ORTHO05D004743 4.9e-24 114.0 119 53.8
CiPaw.07G057300 Carya illinoinensis HOM05D000811 ORTHO05D004743 6.4e-24 113.6 117 54.7
Gohir.A10G097900 Gossypium hirsutum HOM05D000811 ORTHO05D004743 6.4e-24 113.6 117 53.0
Duzib264G0600 Durio zibethinus HOM05D000811 ORTHO05D004743 8.4e-24 113.2 118 51.7
GSVIVG01018801001 Vitis vinifera HOM05D000811 ORTHO05D004743 8.4e-24 113.2 119 53.8
Actinidia27847 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.4e-23 112.5 119 53.8
FvH4_6g24550 Fragaria vesca HOM05D000811 ORTHO05D004743 1.4e-23 112.5 118 53.4
FAN02G2932 Fragaria x ananassa HOM05D000811 ORTHO05D004743 1.4e-23 112.5 118 53.4
FAN05G0499 Fragaria x ananassa HOM05D000811 ORTHO05D004743 1.4e-23 112.5 118 53.4
FAN09G3320 Fragaria x ananassa HOM05D000811 ORTHO05D004743 1.4e-23 112.5 118 53.4
Prupe.1G202600 Prunus persica HOM05D000811 ORTHO05D004743 1.4e-23 112.5 118 53.4
MD08G1077500 Malus domestica HOM05D000811 ORTHO05D004743 1.9e-23 112.1 118 53.4
RcHm_v2.0_Chr3g0483651 Rosa chinensis HOM05D000811 ORTHO05D004743 1.9e-23 112.1 118 53.4
Hund14039 Selenicereus undatus HOM05D000811 ORTHO05D004743 2.4e-23 111.7 115 54.8
THA.LOC104819758 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 2.4e-23 111.7 118 53.4
Hund16485 Selenicereus undatus HOM05D000811 ORTHO05D004743 3.2e-23 111.3 118 53.4
TWI53G1676 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 4.2e-23 110.9 118 53.4
CSS0030860 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 5.4e-23 110.5 118 50.8
ECA238G1572 Erigeron canadensis HOM05D000811 ORTHO05D004743 5.4e-23 110.5 118 53.4
Actinidia31003 Actinidia chinensis HOM05D000811 ORTHO05D004743 7.1e-23 110.2 119 51.3
Ah.03g141760 Amaranthus hybridus HOM05D000811 ORTHO05D004743 7.1e-23 110.2 116 52.6
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 7.1e-23 110.2 117 52.1
ECA246G0760 Erigeron canadensis HOM05D000811 ORTHO05D004743 7.1e-23 110.2 118 50.8
Lalb_Chr05g0229881 Lupinus albus HOM05D000811 ORTHO05D004743 7.1e-23 110.2 118 54.2
Nn5g29274 Nelumbo nucifera HOM05D000811 ORTHO05D004743 7.1e-23 110.2 119 52.9
Oeu035303.1 Olea europaea HOM05D000811 ORTHO05D004743 7.1e-23 110.2 118 52.5
Sc16g0002050 Simmondsia chinensis HOM05D000811 ORTHO05D004743 7.1e-23 110.2 118 51.7
arahy.Tifrunner.gnm1.ann1.66CB8L Arachis hypogaea HOM05D000811 ORTHO05D004743 9.3e-23 109.8 115 53.0
arahy.Tifrunner.gnm1.ann1.LCWP3I Arachis hypogaea HOM05D000811 ORTHO05D004743 9.3e-23 109.8 115 53.0
arahy.Tifrunner.gnm1.ann1.T1352T Arachis hypogaea HOM05D000811 ORTHO05D004743 9.3e-23 109.8 115 53.0
Lalb_Chr16g0391191 Lupinus albus HOM05D000811 ORTHO05D004743 9.3e-23 109.8 113 55.8
MSTRG.5435 Avicennia marina HOM05D000811 ORTHO05D004743 1.2e-22 109.4 118 51.7
FAN14G0683 Fragaria x ananassa HOM05D000811 ORTHO05D004743 1.2e-22 109.4 118 52.5
Glyma.16G129900 Glycine max HOM05D000811 ORTHO05D004743 1.2e-22 109.4 113 54.9
MD04G1047200 Malus domestica HOM05D000811 ORTHO05D004743 1.2e-22 109.4 116 53.4
Glyma.02G049500 Glycine max HOM05D000811 ORTHO05D004743 1.6e-22 109.0 113 54.0
Oeu062504.1 Olea europaea HOM05D000811 ORTHO05D004743 1.6e-22 109.0 118 51.7
ClCG07G008440 Citrullus lanatus HOM05D000811 ORTHO05D004743 2.1e-22 108.6 118 52.5
Hma1.2p1_0258F.1_g104200 Hydrangea macrophylla HOM05D000811 ORTHO05D004743 2.1e-22 108.6 117 51.3
Migut.B00125 Erythranthe guttata HOM05D000811 ORTHO05D004743 2.7e-22 108.2 118 52.5
vmacro18420 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 2.7e-22 108.2 118 51.7
MELO3C016378.2 Cucumis melo HOM05D000811 ORTHO05D004743 4.6e-22 107.5 117 53.0
CsaV3_4G005720 Cucumis sativus L. HOM05D000811 ORTHO05D004743 4.6e-22 107.5 118 53.4
Lj4g0014424 Lotus japonicus HOM05D000811 ORTHO05D004743 4.6e-22 107.5 116 52.6
Phvul.003G260800 Phaseolus vulgaris HOM05D000811 ORTHO05D004743 4.6e-22 107.5 113 53.1
SGA_v2.0_scaffold32G13256 Striga asiatica HOM05D000811 ORTHO05D004743 4.6e-22 107.5 115 52.2
SGA_v2.0_scaffold58G20433 Striga asiatica HOM05D000811 ORTHO05D004743 4.6e-22 107.5 118 50.8
Ciclev10026785m.g Citrus clementina HOM05D000811 ORTHO05D004743 6.0e-22 107.1 118 49.2
HanXRQChr15g0482841 Helianthus annuus HOM05D000811 ORTHO05D004743 6.0e-22 107.1 118 51.7
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 6.0e-22 107.1 118 50.8
THA.LOC104807488 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 6.0e-22 107.1 118 50.0
CDE05G3463 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 7.8e-22 106.7 117 53.0
Carub.0003s3219 Capsella rubella HOM05D000811 ORTHO05D004743 1.0e-21 106.3 120 51.7
Cc07_g10610 Coffea canephora HOM05D000811 ORTHO05D004743 1.0e-21 106.3 116 51.7
Haze_03791 Corylus avellana HOM05D000811 ORTHO05D004743 1.0e-21 106.3 136 46.3
HanXRQChr14g0441311 Helianthus annuus HOM05D000811 ORTHO05D004743 1.0e-21 106.3 118 50.8
Lsat_1_v5_gn_2_78761 Lactuca sativa HOM05D000811 ORTHO05D004743 1.0e-21 106.3 117 51.3
Nn6g32304 Nelumbo nucifera HOM05D000811 ORTHO05D004743 1.0e-21 106.3 119 51.3
PSO170G2420 Papaver somniferum HOM05D000811 ORTHO05D004743 1.0e-21 106.3 95 58.9
AL3G51190 Arabidopsis lyrata HOM05D000811 ORTHO05D004743 1.3e-21 105.9 120 50.8
Thhalv10022913m.g Eutrema salsugineum HOM05D000811 ORTHO05D004743 1.3e-21 105.9 120 50.8
Lsat_1_v5_gn_3_74081 Lactuca sativa HOM05D000811 ORTHO05D004743 1.3e-21 105.9 116 50.9
Sp3g31470 Schrenkiella parvula HOM05D000811 ORTHO05D004743 1.3e-21 105.9 120 50.8
CARHR108530 Cardamine hirsuta HOM05D000811 ORTHO05D004743 1.7e-21 105.5 120 50.8
Ca_22371_v3 Cicer arietinum L. HOM05D000811 ORTHO05D004743 2.3e-21 105.1 115 53.9
BcaC06g36361 Brassica carinata HOM05D000811 ORTHO05D004743 3.0e-21 104.8 116 50.0
A06p33380 Brassica napus HOM05D000811 ORTHO05D004743 3.0e-21 104.8 120 50.0
C03p58940 Brassica napus HOM05D000811 ORTHO05D004743 3.0e-21 104.8 120 50.0
C07p04900 Brassica napus HOM05D000811 ORTHO05D004743 3.0e-21 104.8 116 50.0
BolC3t18151H Brassica oleracea HOM05D000811 ORTHO05D004743 3.0e-21 104.8 120 50.0
BolC7t40891H Brassica oleracea HOM05D000811 ORTHO05D004743 3.0e-21 104.8 116 50.0
BraA06t26271Z Brassica rapa HOM05D000811 ORTHO05D004743 3.0e-21 104.8 120 50.0
BraA07t28059Z Brassica rapa HOM05D000811 ORTHO05D004743 3.0e-21 104.8 116 50.0
HPP92_003523 Vanilla planifolia HOM05D000811 ORTHO05D004743 3.0e-21 104.8 118 49.2
BcaB03g16590 Brassica carinata HOM05D000811 ORTHO05D004743 3.9e-21 104.4 120 50.0
BcaB08g34786 Brassica carinata HOM05D000811 ORTHO05D004743 3.9e-21 104.4 120 50.0
Migut.H01149 Erythranthe guttata HOM05D000811 ORTHO05D004743 3.9e-21 104.4 118 49.2
CDE09G0022 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 5.1e-21 104.0 117 49.6
Sed0008902 Sechium edule HOM05D000811 ORTHO05D004743 5.1e-21 104.0 115 51.3
vmacro17410 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 5.1e-21 104.0 148 43.2
Zm00001eb419950 Zea mays HOM05D000811 ORTHO05D004743 5.1e-21 104.0 114 51.8
Sed0024520 Sechium edule HOM05D000811 ORTHO05D004743 6.6e-21 103.6 118 50.8
Lj4A217G58 Lonicera japonica HOM05D000811 ORTHO05D004743 8.7e-21 103.2 118 48.3
Nitab4.5_0001133g0070 Nicotiana tabacum HOM05D000811 ORTHO05D004743 8.7e-21 103.2 115 50.4
AT2G18040 Arabidopsis thaliana HOM05D000811 ORTHO05D004743 1.1e-20 102.8 120 50.0
Dinv23445 Davidia involucrata HOM05D000586 ORTHO05D003356 1.5e-20 102.4 109 53.2
Nitab4.5_0006862g0010 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.5e-20 102.4 115 50.4
CDE02G4615 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 1.9e-20 102.1 117 49.6
ATR0147G012 Amborella trichopoda HOM05D000811 ORTHO05D004743 2.5e-20 101.7 117 49.6
EL10As8g23839 Beta vulgaris HOM05D000811 ORTHO05D004743 3.3e-20 101.3 115 51.3
MSTRG.2701 Avicennia marina HOM05D000811 ORTHO05D004743 4.3e-20 100.9 118 48.3
CAN.G1365.1 Capsicum annuum HOM05D000811 ORTHO05D004743 4.3e-20 100.9 115 49.6
Os04g0118500 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D004743 4.3e-20 100.9 114 51.8
SalBow3G3608 Salvia bowleyana HOM05D000811 ORTHO05D004743 5.6e-20 100.5 118 47.5
C06p13450 Brassica napus HOM05D000811 ORTHO05D004743 9.6e-20 99.8 121 49.6
AUR62043613 Chenopodium quinoa HOM05D000811 ORTHO05D004743 9.6e-20 99.8 113 52.2
AUR62044455 Chenopodium quinoa HOM05D000811 ORTHO05D004743 9.6e-20 99.8 113 52.2
Aa31LG8G15220 Aethionema arabicum HOM05D000811 ORTHO05D004743 1.3e-19 99.4 139 41.7
Medtr8g076070 Medicago truncatula HOM05D000811 ORTHO05D004743 1.3e-19 99.4 115 51.3
HPP92_002102 Vanilla planifolia HOM05D000811 ORTHO05D004743 1.3e-19 99.4 116 46.6
TPR.G30057 Trifolium pratense HOM05D000811 ORTHO05D004743 1.6e-19 99.0 117 51.3
Zm00001eb067280 Zea mays HOM05D000811 ORTHO05D004743 2.8e-19 98.2 118 48.3
BolC6t36506H Brassica oleracea HOM05D000811 ORTHO05D004743 3.6e-19 97.8 121 48.8
Peaxi162Scf00799g00517 Petunia axillaris HOM05D000811 ORTHO05D004743 3.6e-19 97.8 115 47.8
Sabra07G0010400 Salix brachista HOM05D000811 ORTHO05D004743 3.6e-19 97.8 153 41.2
Solyc02g062250.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 3.6e-19 97.8 116 48.3
Sopen02g013220 Solanum pennellii HOM05D000811 ORTHO05D004743 3.6e-19 97.8 116 48.3
PGSC0003DMG400019933 Solanum tuberosum HOM05D000811 ORTHO05D004743 3.6e-19 97.8 116 48.3
PSO210G3301 Papaver somniferum HOM05D000811 ORTHO05D004743 4.8e-19 97.4 119 47.1
Psat4g098480 Pisum sativum HOM05D000811 ORTHO05D004743 8.1e-19 96.7 113 50.4
Pp3c20_23120 Physcomitrium patens HOM05D000811 ORTHO05D004743 1.1e-18 96.3 115 47.8
AagrBONN_evm.TU.Sc2ySwM_228.1572 Anthoceros agrestis HOM05D000811 ORTHO05D004743 1.4e-18 95.9 119 46.2
Pp3c10_25090 Physcomitrium patens HOM05D000811 ORTHO05D004743 2.4e-18 95.1 118 46.6
unitig_699.g19711 Utricularia gibba HOM05D000811 ORTHO05D004743 1.5e-17 92.4 118 43.2
SMO146G0274 Selaginella moellendorffii HOM05D000811 ORTHO05D004743 4.5e-17 90.9 118 44.1
MCO04G419 Micromonas commoda HOM05D000811 ORTHO05D004743 2.9e-16 88.2 116 43.1
CBR_g552 Chara braunii HOM05D000811 ORTHO05D004743 4.9e-16 87.4 115 43.5
MBI05_g26504_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 8.4e-16 86.7 103 49.5
Dinv41989 Davidia involucrata HOM05D000586 ORTHO05D003356 9.3e-15 83.2 109 46.8
Cre16.g671900 Chlamydomonas reinhardtii HOM05D000811 ORTHO05D004743 3.5e-14 81.3 115 40.9
Actinidia00122 Actinidia chinensis HOM05D000811 ORTHO05D004743 9.6e-12 73.2 100 44.0
Sc18g0002580 Simmondsia chinensis HOM05D000811 ORTHO05D004743 1.4e-10 69.3 40 77.5
Zm00001eb106800 Zea mays HOM05D000811 ORTHO05D004743 9.0e-10 66.6 40 77.5
Haze_26720 Corylus avellana HOM05D000811 ORTHO05D004743 1.2e-09 66.2 111 36.9
unitig_0.g45 Utricularia gibba HOM05D000628 ORTHO05D001121 1.5e-09 65.9 97 41.2
Os04g0663800 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D004743 2.0e-09 65.5 41 75.6
Atru.chr3.785 Acer truncatum HOM05D000811 ORTHO05D004743 5.8e-09 63.9 31 93.5
PRCOL_00002510 Prasinoderma coloniale HOM05D009714 ORTHO05D004743 5.8e-09 63.9 137 30.7
Peaxi162Scf00362g01151 Petunia axillaris HOM05D000811 ORTHO05D004743 1.0e-08 63.2 32 90.6
Gohir.A11G041500 Gossypium hirsutum HOM05D000811 ORTHO05D004743 2.2e-08 62.0 31 90.3
HanXRQChr11g0327321 Helianthus annuus HOM05D000811 ORTHO05D004743 1.9e-07 58.9 31 83.9
VMungo0289G0001 Vigna mungo HOM05D000811 ORTHO05D004743 1.9e-07 58.9 28 89.3
A07p02600 Brassica napus HOM05D000811 ORTHO05D004743 4.2e-07 57.8 29 86.2
CDE05G3063 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 9.3e-07 56.6 30 83.3
MBI04_g40115_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 1.6e-06 55.8 30 83.3


User provided reference genes

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