Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 3.1e-168 595.1 314 100.0
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 1.6e-140 503.1 314 85.4
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 2.7e-140 502.3 323 83.3
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 1.4e-139 500.0 313 85.0
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 1.8e-139 499.6 314 83.8
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 2.0e-135 486.1 314 81.5
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 1.0e-134 483.8 314 82.2
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 8.3e-97 357.8 328 61.0
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 3.2e-96 355.9 330 60.6
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 7.0e-96 354.8 318 62.6
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 2.7e-95 352.8 326 60.1
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 4.6e-95 352.1 319 60.8
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 7.3e-93 344.7 321 58.6
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 4.7e-92 342.0 329 59.3
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 4.7e-92 342.0 328 59.5
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 2.3e-91 339.7 327 56.9
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 5.2e-91 338.6 331 60.1
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 5.2e-91 338.6 328 58.5
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 6.8e-91 338.2 326 58.0
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 8.9e-91 337.8 328 56.4
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 8.9e-91 337.8 327 56.6
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 2.6e-90 336.3 326 57.7
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 9.8e-90 334.3 329 57.8
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.3e-89 334.0 326 57.1
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 6.4e-89 331.6 331 58.0
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 6.4e-89 331.6 320 59.7
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 1.9e-88 330.1 327 58.4
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 5.4e-88 328.6 328 54.9
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 1.2e-87 327.4 329 58.1
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.3e-86 323.9 321 56.7
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 1.7e-86 323.6 327 55.0
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 1.7e-86 323.6 324 57.7
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 8.6e-86 321.2 314 57.0
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 1.1e-85 320.9 314 57.6
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 1.1e-85 320.9 313 57.2
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 3.3e-85 319.3 325 56.0
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 9.5e-85 317.8 325 56.9
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 1.2e-84 317.4 327 56.3
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 2.8e-84 316.2 322 56.2
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 2.8e-84 316.2 332 59.0
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 8.1e-84 314.7 312 56.1
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 1.2e-82 310.8 326 55.5
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 1.5e-82 310.5 322 55.9
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 2.0e-82 310.1 326 55.8
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 2.2e-81 306.6 327 56.3
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 2.2e-81 306.6 327 56.3
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 2.2e-81 306.6 323 56.7
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 3.7e-81 305.8 327 54.1
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 4.9e-81 305.4 323 55.1
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 4.9e-81 305.4 324 54.6
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 6.4e-81 305.1 316 54.7
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 8.3e-81 304.7 321 54.5
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 8.3e-81 304.7 327 54.1
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 1.9e-80 303.5 336 53.0
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 4.6e-79 298.9 328 52.4
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 6.0e-79 298.5 328 53.0
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 1.0e-78 297.7 324 54.9
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 1.7e-78 297.0 315 53.7
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 2.3e-78 296.6 313 53.0
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 3.0e-78 296.2 312 55.1
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 3.0e-78 296.2 318 54.1
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 3.9e-78 295.8 370 51.1
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 5.1e-78 295.4 317 53.0
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 6.6e-78 295.0 328 51.8
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 6.6e-78 295.0 331 55.6
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 8.6e-78 294.7 314 54.5
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 1.1e-77 294.3 308 55.2
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 2.5e-77 293.1 320 54.1
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 3.3e-77 292.7 320 52.5
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 1.2e-76 290.8 320 52.2
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 1.2e-76 290.8 329 55.0
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 3.6e-76 289.3 313 54.0
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 8.1e-76 288.1 312 54.8
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 3.1e-75 286.2 318 52.8
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 4.0e-75 285.8 311 53.4
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 5.2e-75 285.4 324 52.8
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 1.5e-74 283.9 324 52.8
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.5e-74 283.9 324 52.8
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.5e-74 283.9 324 52.8
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 1.7e-73 280.4 315 52.1
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 3.7e-73 279.3 311 52.7
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.7e-73 279.3 336 51.5
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 6.4e-73 278.5 336 51.5
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 8.4e-73 278.1 407 45.5
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 1.9e-72 276.9 325 51.1
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 3.2e-72 276.2 330 49.4
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 7.1e-72 275.0 311 52.4
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 7.1e-72 275.0 311 52.4
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 7.8e-71 271.6 311 52.1
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.7e-70 270.4 311 50.2
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 4.3e-69 265.8 318 50.9
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 1.6e-68 263.8 273 57.9
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 8.1e-68 261.5 310 47.7
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 1.7e-65 253.8 299 52.5
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 4.9e-65 252.3 330 50.3
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 1.9e-64 250.4 321 48.9
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 1.0e-62 244.6 320 49.1
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.7e-62 243.8 312 48.7
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 3.0e-62 243.0 155 74.2
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 1.4e-59 234.2 322 45.3
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 2.4e-59 233.4 322 44.7
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 5.8e-58 228.8 316 43.7
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 9.6e-53 211.5 323 43.0
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 2.7e-47 193.4 323 40.2
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 8.7e-46 188.3 134 63.4
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 2.6e-42 176.8 317 39.1
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 8.4e-41 171.8 308 41.6
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 7.1e-40 168.7 264 38.3
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 1.6e-39 167.5 188 46.8
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 1.4e-35 154.5 344 34.9
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 5.9e-34 149.1 335 37.6
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 5.5e-32 142.5 265 41.1
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 1.3e-30 137.9 327 33.0
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 5.7e-29 132.5 137 46.7
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.3e-28 131.3 326 31.9
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 8.2e-28 128.6 129 46.5
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 8.5e-25 118.6 138 44.2
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 5.5e-24 115.9 136 52.2
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 5.7e-21 105.9 236 39.0
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 2.8e-20 103.6 154 42.9
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 2.4e-19 100.5 236 38.1
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 1.0e-17 95.1 57 64.9
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 2.9e-17 93.6 57 63.2
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 1.0e-09 68.6 119 42.0
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 5.0e-09 66.2 42 73.8
GSVIVG01008148001 Vitis vinifera HOM05D006355 ORTHO05D000948 8.5e-09 65.5 91 41.8


User provided reference genes

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