Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.3e-219 766.1 404 100.0
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 5.9e-180 634.4 429 81.4
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.1e-162 577.0 382 81.7
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.6e-161 573.2 387 80.4
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 8.0e-161 570.9 382 81.2
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 1.1e-154 550.4 413 75.8
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 5.1e-139 498.4 371 74.4
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 2.4e-136 489.6 336 78.9
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.2e-135 487.3 395 70.4
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.2e-132 477.2 364 72.3
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 3.5e-132 475.7 404 68.8
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 6.0e-132 474.9 391 69.1
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 1.0e-131 474.2 392 69.4
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 5.1e-131 471.9 367 71.7
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 1.1e-130 470.7 345 72.8
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 3.3e-130 469.2 389 68.1
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 4.3e-130 468.8 352 74.7
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 1.6e-129 466.8 328 75.6
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 2.8e-129 466.1 325 76.3
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 3.6e-129 465.7 381 69.3
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 1.1e-128 464.2 383 68.1
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 2.0e-127 459.9 373 69.2
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.4e-125 453.8 339 72.6
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 2.4e-125 453.0 357 70.9
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 3.2e-125 452.6 280 85.0
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 4.2e-125 452.2 373 68.1
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 5.4e-125 451.8 338 74.3
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 1.6e-124 450.3 385 67.5
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 3.5e-124 449.1 365 67.7
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 3.5e-124 449.1 390 66.9
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 4.6e-124 448.7 365 67.7
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 4.6e-124 448.7 365 68.2
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 7.8e-124 448.0 389 65.0
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.0e-123 447.6 359 68.8
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.7e-123 446.8 328 73.8
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 2.3e-123 446.4 414 65.5
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 6.6e-123 444.9 328 73.5
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.6e-123 444.9 328 73.5
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 8.7e-123 444.5 367 66.8
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 8.7e-123 444.5 403 64.8
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.1e-122 444.1 281 81.5
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.1e-122 444.1 281 81.5
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.5e-122 443.7 328 73.2
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.9e-122 443.4 371 65.2
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.9e-122 443.4 401 65.6
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 3.3e-122 442.6 323 74.3
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 3.3e-122 442.6 339 72.3
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 4.3e-122 442.2 290 80.3
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 5.6e-122 441.8 321 73.5
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.6e-121 440.3 321 73.5
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.6e-121 440.3 308 75.3
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 2.1e-121 439.9 347 69.2
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 3.6e-121 439.1 321 73.5
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.1e-120 437.6 348 69.3
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 2.4e-120 436.4 321 73.2
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 3.1e-120 436.0 321 72.9
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 3.1e-120 436.0 362 68.8
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 4.0e-120 435.6 322 73.3
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 4.0e-120 435.6 364 67.6
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 5.3e-120 435.3 302 75.8
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 9.0e-120 434.5 322 72.4
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 2.6e-119 433.0 322 73.0
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 9.9e-119 431.0 306 75.5
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 1.7e-118 430.3 270 82.6
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 2.9e-118 429.5 337 70.3
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 4.9e-118 428.7 283 78.1
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 4.9e-118 428.7 328 71.6
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 1.1e-117 427.6 377 65.0
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 1.1e-117 427.6 328 71.3
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 1.1e-117 427.6 288 77.4
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 2.4e-117 426.4 388 62.6
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 3.5e-116 422.5 296 77.0
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 4.6e-116 422.2 321 70.7
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.6e-116 422.2 259 83.4
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 7.9e-116 421.4 247 87.0
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.3e-115 420.6 388 62.6
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 5.1e-115 418.7 321 71.3
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 8.7e-115 417.9 315 71.4
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 2.5e-114 416.4 333 68.8
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 4.3e-114 415.6 361 67.0
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.4e-112 410.6 384 62.5
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 4.9e-110 402.1 390 60.3
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.9e-109 400.2 306 69.0
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 4.6e-108 395.6 388 59.3
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 2.3e-107 393.3 338 66.0
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 2.3e-107 393.3 330 64.5
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 2.5e-106 389.8 307 70.0
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 1.6e-105 387.1 376 60.4
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 3.7e-105 386.0 316 68.4
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 6.2e-105 385.2 318 66.4
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.3e-102 377.5 312 69.2
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 5.5e-101 372.1 327 65.7
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 6.0e-100 368.6 467 50.3
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 3.9e-99 365.9 472 49.4
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 2.5e-98 363.2 406 56.4
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.3e-97 360.9 236 78.0
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 2.2e-97 360.1 267 70.8
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.1e-92 343.6 237 76.8
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 2.3e-91 340.1 270 65.2
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 3.0e-91 339.7 317 60.6
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 8.8e-91 338.2 305 63.6
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.5e-90 337.4 207 82.6
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 2.0e-87 327.0 302 63.9
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 2.0e-87 327.0 223 75.3
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 7.7e-87 325.1 178 95.5
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 3.6e-84 316.2 310 62.6
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 7.7e-79 298.5 275 56.7
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.0e-78 298.1 351 53.3
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 7.2e-77 292.0 430 48.4
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 9.4e-77 291.6 263 57.8
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.0e-70 271.6 334 49.4
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 5.0e-70 269.2 258 56.6
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 8.5e-70 268.5 187 72.7
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 1.5e-66 257.7 157 84.1
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.5e-62 241.9 264 50.0
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.2e-58 231.5 264 54.5
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.5e-58 231.1 230 55.7
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.4e-56 224.6 129 87.6
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.2e-52 211.5 130 83.8
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 5.2e-51 206.1 136 77.9
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 1.6e-47 194.5 121 86.0
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.5e-42 177.9 108 79.6
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 3.0e-38 163.7 253 37.2
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 1.4e-27 128.3 176 43.2
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 4.4e-26 123.2 82 80.5
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-25 120.6 187 38.0
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 3.7e-25 120.2 90 70.0
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.7e-17 94.7 128 49.2
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 3.0e-14 84.0 105 56.2
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 2.1e-12 77.8 41 97.6
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 9.9e-10 68.9 219 26.0
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 8.4e-09 65.9 36 88.9
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 4.6e-07 60.1 51 58.8


User provided reference genes

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