Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 3.6e-142 508.8 384 100.0
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.3e-139 500.4 386 99.0
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 3.8e-128 462.2 389 93.1
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 3.8e-128 462.2 382 92.9
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 5.5e-127 458.4 392 90.1
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 1.2e-116 424.1 381 90.0
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 5.5e-111 405.2 379 86.3
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.2e-110 404.1 373 79.9
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 8.3e-107 391.3 389 82.0
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 7.0e-106 388.3 388 83.0
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 7.0e-106 388.3 391 82.1
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 9.2e-106 387.9 402 80.6
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 2.0e-105 386.7 391 80.8
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 2.7e-105 386.3 389 80.7
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 3.5e-105 386.0 402 80.6
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 4.5e-105 385.6 223 83.9
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 5.9e-105 385.2 223 83.9
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 1.7e-104 383.6 392 81.9
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 1.7e-104 383.6 392 81.9
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 1.7e-104 383.6 223 84.3
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 3.8e-104 382.5 386 82.4
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 5.0e-104 382.1 383 81.2
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 5.0e-104 382.1 383 81.2
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 8.6e-104 381.3 391 81.6
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 8.6e-104 381.3 391 81.3
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 1.1e-103 380.9 387 82.2
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 1.1e-103 380.9 382 85.6
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 1.1e-103 380.9 385 84.4
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 1.1e-103 380.9 223 83.9
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 1.5e-103 380.6 389 79.7
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 4.3e-103 379.0 390 81.0
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 2.8e-102 376.3 390 78.2
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 2.8e-102 376.3 395 77.7
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 3.6e-102 375.9 383 80.4
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 8.0e-102 374.8 382 73.0
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 1.0e-101 374.4 406 67.2
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 1.0e-101 374.4 392 79.3
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 2.3e-101 373.2 390 77.9
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 2.3e-101 373.2 396 80.3
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 3.0e-101 372.9 221 82.4
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 6.8e-101 371.7 394 79.2
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 2.0e-100 370.2 224 82.1
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 2.0e-100 370.2 380 80.5
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 3.4e-100 369.4 223 81.2
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 7.5e-100 368.2 222 82.4
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 1.7e-99 367.1 381 84.3
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 2.2e-99 366.7 384 82.8
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 3.7e-99 365.9 397 81.4
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 3.7e-99 365.9 393 81.2
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 3.7e-99 365.9 404 80.0
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 6.4e-99 365.2 380 82.6
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 6.4e-99 365.2 222 82.9
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 1.1e-98 364.4 387 83.2
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 1.4e-98 364.0 226 81.0
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.4e-98 364.0 380 83.2
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 1.6e-97 360.5 390 81.0
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 2.0e-97 360.1 425 69.4
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 2.7e-97 359.8 222 81.1
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 2.7e-97 359.8 386 79.3
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 2.7e-97 359.8 384 82.3
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 2.7e-97 359.8 388 80.2
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 2.7e-97 359.8 399 77.4
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 4.6e-97 359.0 222 81.1
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 1.3e-96 357.5 413 76.8
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 3.0e-96 356.3 386 81.9
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 6.6e-96 355.1 221 81.0
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 1.1e-95 354.4 222 78.8
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.1e-95 354.4 408 72.1
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 1.9e-95 353.6 394 80.5
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 3.3e-95 352.8 381 74.3
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 4.3e-95 352.4 389 77.6
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 4.3e-95 352.4 389 77.1
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 9.5e-95 351.3 438 74.0
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 2.8e-94 349.7 190 88.4
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 3.6e-94 349.4 190 88.9
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 4.7e-94 349.0 190 87.9
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 4.7e-94 349.0 381 80.3
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 8.0e-94 348.2 190 87.9
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 1.4e-93 347.4 190 87.9
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 1.8e-93 347.1 214 77.1
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 1.8e-93 347.1 220 76.4
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 1.8e-93 347.1 220 76.4
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 1.8e-93 347.1 220 76.4
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 6.8e-93 345.1 190 83.7
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 8.9e-93 344.7 215 79.5
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 8.9e-93 344.7 215 79.5
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 1.2e-92 344.4 190 83.7
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 1.2e-92 344.4 190 83.2
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 2.6e-92 343.2 190 83.2
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 2.6e-92 343.2 221 76.9
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 4.4e-92 342.4 190 83.2
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 1.7e-91 340.5 190 82.1
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 2.2e-91 340.1 190 82.6
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 2.2e-91 340.1 443 72.2
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 1.9e-90 337.0 190 82.1
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 4.1e-90 335.9 200 80.5
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 5.4e-90 335.5 190 83.2
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 1.6e-89 334.0 223 73.1
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 2.7e-89 333.2 197 79.7
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 7.8e-89 331.6 190 82.6
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 1.0e-88 331.3 360 83.9
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 3.0e-88 329.7 191 82.2
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 1.1e-87 327.8 213 73.2
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 9.5e-87 324.7 211 73.9
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 1.2e-86 324.3 499 59.9
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 2.1e-86 323.6 218 71.6
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 3.6e-86 322.8 224 71.4
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 1.8e-85 320.5 190 80.5
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 2.3e-85 320.1 190 78.4
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.3e-85 320.1 387 55.8
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 4.0e-85 319.3 190 77.4
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 5.2e-85 318.9 177 84.2
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 9.2e-82 308.1 541 55.3
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 1.1e-79 301.2 186 79.0
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 6.8e-77 292.0 383 47.3
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 1.7e-75 287.3 222 70.7
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 2.4e-74 283.5 377 47.7
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 1.2e-68 264.6 190 62.1
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 1.1e-55 221.5 185 54.6
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 1.4e-53 214.5 213 50.2
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 4.2e-50 203.0 235 48.9
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 6.0e-49 199.1 327 72.2
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 4.3e-47 193.0 97 92.8
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 3.2e-42 176.8 297 68.7
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 3.2e-42 176.8 94 87.2
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 5.7e-39 166.0 128 67.2
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 2.6e-23 114.0 90 61.1
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 1.3e-22 111.7 70 71.4
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 1.3e-22 111.7 70 71.4
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 3.1e-21 107.1 87 69.0
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 4.1e-13 80.1 53 62.3
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 5.0e-11 73.2 68 54.4
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 1.1e-10 72.0 60 61.7
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 1.6e-09 68.2 42 76.2
Oeu029357.1 Olea europaea HOM05D005421 ORTHO05D026565 2.7e-09 67.4 54 74.1
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 1.8e-08 64.7 148 29.1
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 3.0e-08 63.9 148 28.4
BcaB06g29165 Brassica carinata HOM05D011401 ORTHO05D018605 7.5e-07 59.3 132 35.6
ATR0693G223 Amborella trichopoda HOM05D005421 ORTHO05D031077 1.3e-06 58.5 28 96.4


User provided reference genes

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