Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001959g0020 Nicotiana tabacum HOM05D001533 ORTHO05D005122 5.4e-143 511.1 288 100.0
Nitab4.5_0006286g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 3.1e-138 495.4 287 93.7
CAN.G1671.6 Capsicum annuum HOM05D001533 ORTHO05D005122 4.3e-132 474.9 287 89.2
Peaxi162Scf00083g00714 Petunia axillaris HOM05D001533 ORTHO05D005122 4.4e-129 464.9 287 87.1
Sopen02g028790 Solanum pennellii HOM05D001533 ORTHO05D005122 4.4e-129 464.9 287 87.1
Solyc02g083990.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 7.5e-129 464.2 287 87.1
PGSC0003DMG400003635 Solanum tuberosum HOM05D001533 ORTHO05D005122 1.2e-115 420.2 261 87.4
CAN.G893.6 Capsicum annuum HOM05D001533 ORTHO05D005122 1.8e-114 416.4 287 78.7
Solyc03g033580.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 1.3e-112 410.2 287 78.0
Sopen03g006360 Solanum pennellii HOM05D001533 ORTHO05D005122 6.4e-112 407.9 287 77.7
Hma1.2p1_2281F.1_g318810 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 8.4e-112 407.5 287 74.9
Actinidia31002 Actinidia chinensis HOM05D001533 ORTHO05D005122 1.1e-111 407.1 287 74.6
TWI53G2031 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 3.9e-109 398.7 287 73.9
Ciclev10025997m.g Citrus clementina HOM05D001533 ORTHO05D005122 8.7e-109 397.5 287 73.2
Manes.01G145100 Manihot esculenta HOM05D001533 ORTHO05D005122 8.7e-109 397.5 287 74.2
Nitab4.5_0000438g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 8.7e-109 397.5 261 81.2
Cc00_g26600 Coffea canephora HOM05D001533 ORTHO05D005122 1.1e-108 397.1 287 72.8
Cfa006964 Carpinus fangiana HOM05D001533 ORTHO05D005122 1.5e-108 396.7 287 72.8
Prupe.7G167200 Prunus persica HOM05D001533 ORTHO05D005122 1.5e-108 396.7 287 72.8
Thecc.01G020200 Theobroma cacao HOM05D001533 ORTHO05D005122 1.9e-108 396.4 287 74.2
Cpa.g.sc6.238 Carica papaya HOM05D001533 ORTHO05D005122 7.3e-108 394.4 287 71.8
COL.COLO4_21923 Corchorus olitorius HOM05D001533 ORTHO05D005122 9.6e-108 394.0 288 74.3
MD02G1133400 Malus domestica HOM05D001533 ORTHO05D005122 1.6e-107 393.3 287 72.5
Nn6g32353 Nelumbo nucifera HOM05D001533 ORTHO05D005122 6.2e-107 391.3 283 72.4
Rhsim08G0034200 Rhododendron simsii HOM05D001533 ORTHO05D005122 6.2e-107 391.3 287 70.7
Haze_03774 Corylus avellana HOM05D001533 ORTHO05D005122 1.8e-106 389.8 287 71.8
QL06p033501 Quercus lobata HOM05D001533 ORTHO05D005122 3.1e-106 389.0 287 72.5
TAR381G0830 Trochodendron aralioides HOM05D001533 ORTHO05D005122 3.1e-106 389.0 287 72.1
TWI09G0584 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 4.0e-106 388.7 287 72.1
Nitab4.5_0006119g0010 Nicotiana tabacum HOM05D001533 ORTHO05D005122 5.3e-106 388.3 262 79.0
Peaxi162Scf00034g00264 Petunia axillaris HOM05D001533 ORTHO05D005122 1.2e-105 387.1 268 77.6
Lj4g0002557 Lotus japonicus HOM05D001533 ORTHO05D005122 4.4e-105 385.2 287 69.7
CiPaw.07G057700 Carya illinoinensis HOM05D001533 ORTHO05D005122 2.2e-104 382.9 287 69.7
Duzib187G1725 Durio zibethinus HOM05D001533 ORTHO05D005122 2.9e-104 382.5 289 71.6
vmacro18418 Vaccinium macrocarpon HOM05D001533 ORTHO05D005122 3.8e-104 382.1 287 69.3
CiPaw.08G132200 Carya illinoinensis HOM05D001533 ORTHO05D005122 6.4e-104 381.3 287 69.3
arahy.Tifrunner.gnm1.ann1.JA3WP2 Arachis hypogaea HOM05D001533 ORTHO05D005122 1.4e-103 380.2 287 69.0
ClCG07G008590 Citrullus lanatus HOM05D001533 ORTHO05D005122 7.1e-103 377.9 287 70.0
MELO3C016393.2 Cucumis melo HOM05D001533 ORTHO05D005122 9.3e-103 377.5 287 70.0
Dinv33621 Davidia involucrata HOM05D001533 ORTHO05D005122 9.3e-103 377.5 269 74.0
RcHm_v2.0_Chr2g0099581 Rosa chinensis HOM05D001533 ORTHO05D005122 2.7e-102 375.9 287 69.7
Sabra05G0094600 Salix brachista HOM05D001533 ORTHO05D005122 2.7e-102 375.9 287 71.8
Potri.007G012600 Populus trichocarpa HOM05D001533 ORTHO05D005122 6.0e-102 374.8 287 72.1
CsaV3_4G005560 Cucumis sativus L. HOM05D001533 ORTHO05D005122 1.7e-101 373.2 287 69.3
FvH4_1g11960 Fragaria vesca HOM05D001533 ORTHO05D005122 1.3e-99 367.1 287 68.3
Glyma.02G049100 Glycine max HOM05D001533 ORTHO05D005122 2.1e-99 366.3 281 69.0
Potri.005G115500 Populus trichocarpa HOM05D001533 ORTHO05D005122 2.8e-99 365.9 287 70.0
Ca_22369_v3 Cicer arietinum L. HOM05D001533 ORTHO05D005122 3.6e-99 365.5 281 69.8
FAN26G0519 Fragaria x ananassa HOM05D001533 ORTHO05D005122 3.6e-99 365.5 287 67.9
FAN23G2041 Fragaria x ananassa HOM05D001533 ORTHO05D005122 4.8e-99 365.2 287 67.9
FAN19G0503 Fragaria x ananassa HOM05D001533 ORTHO05D005122 6.2e-99 364.8 287 67.9
Hma1.2p1_0743F.1_g211570 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 1.1e-98 364.0 262 72.5
FAN28G1062 Fragaria x ananassa HOM05D001533 ORTHO05D005122 1.4e-98 363.6 287 67.6
Manes.02G103600 Manihot esculenta HOM05D001533 ORTHO05D005122 1.8e-98 363.2 269 71.7
Sed0027203 Sechium edule HOM05D001533 ORTHO05D005122 1.8e-98 363.2 287 67.2
CSS0030027 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 4.0e-98 362.1 287 68.6
Glyma.01G166700 Glycine max HOM05D001533 ORTHO05D005122 2.6e-97 359.4 287 66.2
CSS0008566 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 7.6e-97 357.8 261 73.6
Phvul.002G109200 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 2.2e-96 356.3 287 65.5
SalBow3G3323 Salvia bowleyana HOM05D001533 ORTHO05D005122 4.9e-96 355.1 263 71.9
Gorai.003G010300 Gossypium raimondii HOM05D001533 ORTHO05D005122 5.5e-95 351.7 261 71.6
Glyma.16G129200 Glycine max HOM05D001533 ORTHO05D005122 9.3e-95 350.9 269 68.0
VMungo0251G1454 Vigna mungo HOM05D001533 ORTHO05D005122 1.6e-94 350.1 282 65.2
Gohir.A02G170000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 2.1e-94 349.7 261 71.3
VMungo1215G1138 Vigna mungo HOM05D001533 ORTHO05D005122 4.6e-94 348.6 287 64.1
SGA_v2.0_scaffold137G35090 Striga asiatica HOM05D001533 ORTHO05D005122 7.9e-94 347.8 268 67.5
TPR.G30063 Trifolium pratense HOM05D001533 ORTHO05D005122 1.3e-93 347.1 286 63.6
Phvul.003G262700 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 1.8e-93 346.7 282 64.5
Lj2g0008453 Lotus japonicus HOM05D001533 ORTHO05D005122 2.3e-93 346.3 287 64.5
PSO170G0469 Papaver somniferum HOM05D001533 ORTHO05D005122 3.3e-92 342.4 285 64.9
Atru.chr3.790 Acer truncatum HOM05D001533 ORTHO05D005122 2.8e-91 339.3 261 68.2
Oeu035307.1 Olea europaea HOM05D001533 ORTHO05D005122 2.8e-91 339.3 261 69.7
PSO700G0386 Papaver somniferum HOM05D001533 ORTHO05D005122 2.8e-91 339.3 285 64.9
Duzib264G0112 Durio zibethinus HOM05D001533 ORTHO05D005122 8.1e-91 337.8 251 71.7
MSTRG.2705 Avicennia marina HOM05D001533 ORTHO05D005122 3.1e-90 335.9 242 73.1
CANSAT80G2154 Cannabis sativa HOM05D001533 ORTHO05D005122 1.3e-88 330.5 287 66.2
Gohir.D03G010000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 2.9e-88 329.3 250 70.0
Glyma.11G076600 Glycine max HOM05D001533 ORTHO05D005122 3.2e-87 325.9 277 65.7
arahy.Tifrunner.gnm1.ann1.H1V2NS Arachis hypogaea HOM05D001533 ORTHO05D005122 1.6e-86 323.6 251 66.5
Gohir.A11G176200 Gossypium hirsutum HOM05D001533 ORTHO05D005122 4.6e-86 322.0 261 67.4
Duzib147G0876 Durio zibethinus HOM05D001533 ORTHO05D005122 5.1e-85 318.5 253 71.9
DCAR_016613 Daucus carota HOM05D001533 ORTHO05D005122 6.7e-85 318.2 263 64.3
Gorai.007G195800 Gossypium raimondii HOM05D001533 ORTHO05D005122 5.7e-84 315.1 251 68.5
TAR628G0959 Trochodendron aralioides HOM05D001533 ORTHO05D005122 3.7e-83 312.4 241 66.4
Gohir.D11G183900 Gossypium hirsutum HOM05D001533 ORTHO05D005122 6.3e-83 311.6 251 68.1
Lalb_Chr05g0229891 Lupinus albus HOM05D001533 ORTHO05D005122 1.1e-82 310.8 257 63.8
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 1.5e-81 307.0 288 61.5
Lj2C466T13 Lonicera japonica HOM05D001533 ORTHO05D005122 2.0e-81 306.6 288 60.1
Nn5g29330 Nelumbo nucifera HOM05D001533 ORTHO05D005122 2.0e-81 306.6 241 66.0
Lj4C217T16 Lonicera japonica HOM05D001533 ORTHO05D005122 3.4e-81 305.8 286 60.8
Lalb_Chr09g0321781 Lupinus albus HOM05D001533 ORTHO05D005122 3.4e-81 305.8 287 59.6
Hund16484 Selenicereus undatus HOM05D001533 ORTHO05D005122 6.5e-80 301.6 262 61.8
PGR119G1411 Punica granatum HOM05D001533 ORTHO05D005122 3.6e-78 295.8 273 61.5
Eucgr.J02426 Eucalyptus grandis HOM05D001533 ORTHO05D005122 7.9e-78 294.7 288 60.1
Oeu048459.1 Olea europaea HOM05D001533 ORTHO05D005122 7.9e-78 294.7 286 60.8
AUR62043756 Chenopodium quinoa HOM05D001533 ORTHO05D005122 3.9e-77 292.4 261 61.7
AUR62044201 Chenopodium quinoa HOM05D001533 ORTHO05D005122 3.9e-77 292.4 261 61.7
AUR62007522 Chenopodium quinoa HOM05D001533 ORTHO05D005122 6.7e-77 291.6 261 60.9
THA.LOC104804260 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 4.8e-75 285.4 289 55.0
Os06g0715400 Oryza sativa ssp. japonica HOM05D001533 ORTHO05D005122 2.6e-73 279.6 279 54.5
CANSAT01G1879 Cannabis sativa HOM05D001533 ORTHO05D005122 4.5e-73 278.9 253 59.3
Lalb_Chr16g0377521 Lupinus albus HOM05D001533 ORTHO05D005122 5.9e-73 278.5 244 60.7
THA.LOC104807492 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 7.7e-73 278.1 287 53.7
EL10As8g23833 Beta vulgaris HOM05D001533 ORTHO05D005122 1.7e-72 276.9 287 55.4
ECA246G3074 Erigeron canadensis HOM05D001533 ORTHO05D005122 5.5e-71 271.9 255 58.0
GSVIVG01018794001 Vitis vinifera HOM05D001533 ORTHO05D005122 2.7e-70 269.6 256 59.8
Oeu005320.1 Olea europaea HOM05D001533 ORTHO05D005122 3.0e-69 266.2 261 59.8
Zm00001eb228040 Zea mays HOM05D001533 ORTHO05D005122 1.5e-68 263.8 277 53.1
Sp3g31420 Schrenkiella parvula HOM05D001533 ORTHO05D005122 1.7e-67 260.4 290 51.7
AT2G17990 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 4.8e-67 258.8 292 51.4
Ah.02g124450 Amaranthus hybridus HOM05D001533 ORTHO05D005122 8.2e-67 258.1 264 58.0
Sc16g0002080 Simmondsia chinensis HOM05D001533 ORTHO05D005122 1.1e-66 257.7 239 62.8
Aa31LG1G14750 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.8e-66 256.9 288 52.4
Psat4g098560 Pisum sativum HOM05D001533 ORTHO05D005122 1.5e-65 253.8 258 55.4
AL3G51060 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 4.5e-65 252.3 291 49.8
MBI05_g43883_MAGBIO Magnolia biondii HOM05D001533 ORTHO05D005122 3.8e-64 249.2 230 59.6
Carub.0003s3213 Capsella rubella HOM05D001533 ORTHO05D005122 6.5e-64 248.4 290 50.3
Medtr8g076020 Medicago truncatula HOM05D001533 ORTHO05D005122 2.1e-62 243.4 225 62.7
Thhalv10004494m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 2.3e-61 240.0 286 50.0
Thhalv10022777m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 5.7e-60 235.3 289 50.5
CARHR108480 Cardamine hirsuta HOM05D001533 ORTHO05D005122 7.4e-60 235.0 289 50.2
CDE04G1263 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 2.8e-59 233.0 243 49.4
Aqoxy6G02302 Aquilegia oxysepala HOM05D001533 ORTHO05D005122 4.1e-58 229.2 286 50.7
A07p02680 Brassica napus HOM05D001533 ORTHO05D005122 5.3e-58 228.8 288 50.3
BraA07t28064Z Brassica rapa HOM05D001533 ORTHO05D005122 5.3e-58 228.8 288 50.3
CDE02G4489 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 4.5e-57 225.7 242 50.0
C07p04980 Brassica napus HOM05D001533 ORTHO05D005122 5.9e-57 225.3 288 49.0
BolC7t40899H Brassica oleracea HOM05D001533 ORTHO05D005122 5.9e-57 225.3 288 49.0
BcaC06g36351 Brassica carinata HOM05D001533 ORTHO05D005122 1.7e-56 223.8 288 48.6
Aa31LG8G15170 Aethionema arabicum HOM05D001533 ORTHO05D005122 7.2e-55 218.4 290 46.6
BcaB08g34783 Brassica carinata HOM05D001533 ORTHO05D005122 9.4e-55 218.0 288 47.6
AL6G43540 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 2.2e-51 206.8 288 45.1
AL8G45270 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 3.7e-51 206.1 289 47.1
A06p33470 Brassica napus HOM05D001533 ORTHO05D005122 5.3e-50 202.2 288 45.5
BraA06t26280Z Brassica rapa HOM05D001533 ORTHO05D005122 5.3e-50 202.2 288 46.2
AT5G66250 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 9.1e-50 201.4 290 45.5
BolC3t18147H Brassica oleracea HOM05D001533 ORTHO05D005122 2.0e-49 200.3 288 45.5
Sp2g30440 Schrenkiella parvula HOM05D001533 ORTHO05D005122 2.0e-49 200.3 289 48.1
Carub.0008s2824 Capsella rubella HOM05D001533 ORTHO05D005122 1.1e-47 194.5 289 46.0
C03p58890 Brassica napus HOM05D001533 ORTHO05D005122 4.2e-47 192.6 288 44.4
BcaNung04499 Brassica carinata HOM05D001533 ORTHO05D005122 1.6e-46 190.7 238 50.8
Aa31LG6G13050 Aethionema arabicum HOM05D001533 ORTHO05D005122 4.7e-46 189.1 287 41.1
C09p11970 Brassica napus HOM05D001533 ORTHO05D005122 4.7e-46 189.1 230 51.7
BolC9t54085H Brassica oleracea HOM05D001533 ORTHO05D005122 4.7e-46 189.1 230 51.7
BraA09t36653Z Brassica rapa HOM05D001533 ORTHO05D005122 8.0e-46 188.3 229 51.5
AagrBONN_evm.TU.Sc2ySwM_228.4945 Anthoceros agrestis HOM05D001533 ORTHO05D005122 1.0e-45 188.0 300 39.0
CARHR281470 Cardamine hirsuta HOM05D001533 ORTHO05D005122 6.8e-45 185.3 227 50.2
ATR0680G362 Amborella trichopoda HOM05D001533 ORTHO05D005122 3.4e-44 183.0 284 42.3
A09p10100 Brassica napus HOM05D001533 ORTHO05D005122 3.4e-44 183.0 230 50.4
BcaNung04495 Brassica carinata HOM05D001533 ORTHO05D005122 7.0e-42 175.3 216 51.9
Thhalv10025665m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 1.6e-41 174.1 283 39.6
HanXRQChr16g0531321 Helianthus annuus HOM05D001533 ORTHO05D005122 5.5e-39 165.6 185 48.1
SMO358G0186 Selaginella moellendorffii HOM05D001533 ORTHO05D005122 2.8e-38 163.3 244 41.0
Sp7g33880 Schrenkiella parvula HOM05D001533 ORTHO05D005122 4.0e-37 159.5 225 42.2
SEGI_32707 Sequoiadendron giganteum HOM05D001533 ORTHO05D005122 4.4e-36 156.0 288 35.1
Lsat_1_v5_gn_4_146821 Lactuca sativa HOM05D001533 ORTHO05D005122 9.8e-36 154.8 267 40.1
Lsat_1_v5_gn_4_146800 Lactuca sativa HOM05D001533 ORTHO05D005122 3.7e-35 152.9 267 40.1
Carub.0007s0413 Capsella rubella HOM05D001533 ORTHO05D005122 9.2e-34 148.3 282 36.2
HPP92_007128 Vanilla planifolia HOM05D001533 ORTHO05D005122 1.2e-30 137.9 193 45.6
MD15G1246600 Malus domestica HOM05D001533 ORTHO05D005122 4.0e-29 132.9 79 92.4
unitig_899.g14709 Utricularia gibba HOM05D001533 ORTHO05D000063 1.4e-21 107.8 79 72.2
A01p02640 Brassica napus HOM05D001533 ORTHO05D024397 8.3e-19 98.6 249 35.3
BraA01t00250Z Brassica rapa HOM05D001533 ORTHO05D024397 8.3e-19 98.6 249 35.3
C01p02930 Brassica napus HOM05D001533 ORTHO05D024397 3.2e-18 96.7 259 32.4
unitig_699.g19710 Utricularia gibba HOM05D001533 ORTHO05D005122 3.2e-18 96.7 72 70.8
CARHR244500 Cardamine hirsuta HOM05D001533 ORTHO05D005122 2.0e-17 94.0 262 30.5
AUR62043805 Chenopodium quinoa HOM05D001533 ORTHO05D005122 3.5e-17 93.2 74 68.9
BolC1t00279H Brassica oleracea HOM05D001533 ORTHO05D024397 1.1e-13 81.6 228 35.1
AT4G36105 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 2.6e-12 77.0 234 32.1
BcaNung00764 Brassica carinata HOM05D001533 ORTHO05D024397 2.5e-07 60.5 144 34.0


User provided reference genes

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