Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 2.1e-85 318.9 154 100.0
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 2.0e-80 302.4 154 95.5
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 4.2e-78 294.7 149 94.6
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 4.0e-76 288.1 150 94.0
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 4.0e-76 288.1 150 94.0
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 8.3e-74 280.4 149 91.3
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 4.7e-69 264.6 150 85.3
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 8.0e-69 263.8 149 83.2
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 8.8e-68 260.4 146 83.6
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 1.5e-67 259.6 149 81.9
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 3.4e-67 258.5 150 83.3
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 5.7e-67 257.7 157 80.3
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 5.7e-67 257.7 149 83.2
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 4.9e-66 254.6 149 81.9
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 1.4e-65 253.1 149 80.5
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 1.8e-65 252.7 151 80.8
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 4.5e-64 248.1 149 79.9
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 4.5e-64 248.1 147 84.4
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 5.9e-64 247.7 151 81.5
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 2.9e-63 245.4 148 82.4
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.8e-63 245.0 150 80.0
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 5.0e-63 244.6 149 79.2
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 8.6e-63 243.8 147 81.6
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 8.6e-63 243.8 148 81.8
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 8.6e-63 243.8 147 78.9
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 1.1e-62 243.4 152 76.3
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 1.9e-62 242.7 152 78.3
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 3.3e-62 241.9 147 79.6
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 3.3e-62 241.9 147 79.6
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 4.2e-62 241.5 149 81.9
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 4.2e-62 241.5 159 75.5
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 5.5e-62 241.1 152 78.9
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 7.2e-62 240.7 133 85.0
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 9.5e-62 240.4 147 81.6
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 9.5e-62 240.4 147 81.6
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 1.2e-61 240.0 156 76.3
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 1.2e-61 240.0 139 82.0
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 1.6e-61 239.6 143 81.1
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 2.8e-61 238.8 144 79.9
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 2.8e-61 238.8 143 79.7
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 2.8e-61 238.8 147 79.6
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 2.8e-61 238.8 151 79.5
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 3.6e-61 238.4 143 79.7
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 3.6e-61 238.4 143 79.0
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 4.7e-61 238.0 168 71.4
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 8.0e-61 237.3 151 80.1
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 1.0e-60 236.9 144 77.1
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 1.0e-60 236.9 134 81.3
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 1.4e-60 236.5 147 78.9
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 2.3e-60 235.7 127 85.8
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 3.0e-60 235.3 143 79.7
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 4.0e-60 235.0 143 80.4
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 6.8e-60 234.2 149 75.8
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 6.8e-60 234.2 139 81.3
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 6.8e-60 234.2 151 74.8
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 8.9e-60 233.8 139 81.3
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 8.9e-60 233.8 139 81.3
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 8.9e-60 233.8 147 79.6
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 1.5e-59 233.0 134 81.3
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 1.5e-59 233.0 138 81.9
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 2.0e-59 232.6 136 82.4
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 2.0e-59 232.6 142 79.6
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 2.0e-59 232.6 134 82.1
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 2.0e-59 232.6 150 74.7
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 2.0e-59 232.6 143 75.5
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 2.6e-59 232.3 139 78.4
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.4e-59 231.9 146 76.7
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 4.4e-59 231.5 141 78.0
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 7.5e-59 230.7 116 88.8
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 9.8e-59 230.3 147 76.9
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 9.8e-59 230.3 139 77.7
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 9.8e-59 230.3 134 80.6
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 1.7e-58 229.6 145 75.2
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 1.7e-58 229.6 147 76.9
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 2.2e-58 229.2 148 76.4
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 2.9e-58 228.8 148 75.0
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 3.7e-58 228.4 147 75.5
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 4.9e-58 228.0 147 75.5
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 4.9e-58 228.0 145 74.5
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 6.3e-58 227.6 144 74.3
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 6.3e-58 227.6 147 76.2
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 8.3e-58 227.3 147 74.8
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 1.1e-57 226.9 147 74.1
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 1.4e-57 226.5 136 82.4
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 1.4e-57 226.5 140 76.4
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 1.8e-57 226.1 124 83.1
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 1.8e-57 226.1 124 83.1
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 5.4e-57 224.6 134 82.8
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 1.2e-56 223.4 116 86.2
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 1.2e-56 223.4 134 77.6
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 3.5e-56 221.9 137 75.9
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 4.6e-56 221.5 133 82.0
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 1.0e-55 220.3 141 76.6
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 1.9e-54 216.1 143 72.0
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 2.5e-54 215.7 125 80.0
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 2.5e-54 215.7 125 80.0
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.3e-54 215.3 125 80.0
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 3.3e-54 215.3 160 65.6
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 1.2e-53 213.4 112 84.8
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 2.1e-53 212.6 134 75.4
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 2.8e-53 212.2 162 64.2
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 1.4e-52 209.9 153 66.7
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 1.4e-52 209.9 153 66.7
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 3.1e-52 208.8 145 69.7
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 4.0e-52 208.4 136 75.7
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 8.9e-52 207.2 138 69.6
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 2.0e-51 206.1 127 74.0
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 7.5e-51 204.1 107 85.0
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.7e-50 203.0 175 61.7
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 2.2e-50 202.6 143 67.8
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 1.1e-49 200.3 133 69.2
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 4.1e-49 198.4 105 84.8
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 5.4e-49 198.0 155 67.1
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 1.2e-48 196.8 117 75.2
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 6.0e-48 194.5 104 79.8
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.0e-47 193.7 159 65.4
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.7e-47 193.0 104 78.8
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 3.9e-47 191.8 154 66.2
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 2.5e-46 189.1 121 71.1
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 1.5e-43 179.9 112 81.2
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 5.8e-43 177.9 148 62.2
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 1.7e-42 176.4 91 83.5
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 4.9e-42 174.9 108 77.8
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 1.0e-39 167.2 94 83.0
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 6.6e-39 164.5 115 73.0
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 1.1e-38 163.7 111 73.0
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 1.4e-36 156.8 153 57.5
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 4.0e-36 155.2 78 83.3
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 6.6e-31 137.9 81 82.7
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.0e-27 126.3 104 57.7
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 7.6e-27 124.4 87 77.0
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 1.7e-26 123.2 311 30.5
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 6.4e-26 121.3 61 83.6
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 9.3e-25 117.5 150 44.0
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 1.8e-20 103.2 82 58.5
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 3.4e-19 99.0 77 72.7
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 5.8e-19 98.2 52 84.6
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.6e-13 80.1 52 65.4
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 2.8e-13 79.3 65 63.1
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 4.5e-11 72.0 47 76.6
CARHR102660 Cardamine hirsuta HOM05D005035 ORTHO05D006141 2.2e-10 69.7 42 73.8
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 6.4e-10 68.2 40 67.5
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.2e-09 65.9 49 63.3
Nitab4.5_0002750g0060 Nicotiana tabacum HOM05D006608 ORTHO05D008316 9.3e-09 64.3 75 52.0
Dinv33674 Davidia involucrata HOM05D005035 ORTHO05D006141 1.0e-07 60.8 44 68.2
Nitab4.5_0005908g0020 Nicotiana tabacum HOM05D006608 ORTHO05D008316 1.3e-07 60.5 73 49.3
Peaxi162Scf00299g00341 Petunia axillaris HOM05D006608 ORTHO05D008316 3.0e-07 59.3 58 55.2
CSS0011814 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.1e-06 57.4 53 49.1
Sopen01g048480 Solanum pennellii HOM05D006608 ORTHO05D008316 3.3e-06 55.8 73 46.6
PGSC0003DMG400010682 Solanum tuberosum HOM05D006608 ORTHO05D008316 3.3e-06 55.8 73 46.6
Solyc01g106090.3 Solanum lycopersicum HOM05D006608 ORTHO05D008316 4.3e-06 55.5 73 46.6


User provided reference genes

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