Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 9.2e-209 729.9 359 100.0
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 7.5e-195 683.7 349 96.8
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 2.5e-174 615.5 348 87.1
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 8.1e-173 610.5 347 87.6
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 6.4e-170 600.9 347 86.5
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.8e-167 592.8 347 85.0
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 2.7e-144 515.8 347 73.2
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 3.6e-144 515.4 347 71.2
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 4.6e-144 515.0 347 70.9
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 7.9e-144 514.2 346 71.4
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 1.8e-143 513.1 345 71.3
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.3e-143 512.7 347 71.5
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 2.3e-143 512.7 347 71.2
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 6.7e-143 511.1 348 71.8
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 8.8e-143 510.8 347 71.2
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 8.8e-143 510.8 346 70.5
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 2.5e-142 509.2 347 71.2
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 2.5e-142 509.2 347 70.6
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 3.3e-142 508.8 347 69.7
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 1.7e-141 506.5 346 70.2
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 4.1e-140 501.9 347 69.7
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 5.3e-140 501.5 347 69.7
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.2e-139 500.4 347 70.0
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.2e-139 500.4 347 70.0
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 1.2e-139 500.4 348 70.1
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 2.6e-139 499.2 347 68.6
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 3.4e-139 498.8 347 68.0
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 2.9e-138 495.7 342 69.9
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 5.0e-138 495.0 347 68.6
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 5.0e-138 495.0 347 68.6
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 8.5e-138 494.2 347 69.2
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 2.5e-137 492.7 347 68.0
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 4.2e-137 491.9 347 67.7
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 4.2e-137 491.9 344 68.3
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 4.2e-137 491.9 347 68.3
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 4.2e-137 491.9 335 70.1
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 7.2e-137 491.1 347 68.3
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 7.2e-137 491.1 346 68.8
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 9.4e-137 490.7 346 68.5
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 1.2e-136 490.3 343 69.1
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.2e-136 490.3 348 66.4
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 4.7e-136 488.4 347 65.4
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 6.1e-136 488.0 346 69.4
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 6.1e-136 488.0 345 69.3
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 7.9e-136 487.6 346 67.3
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 1.0e-135 487.3 344 67.2
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 1.4e-135 486.9 348 65.5
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.4e-135 486.9 347 66.9
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.0e-135 485.7 367 65.7
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 3.0e-135 485.7 338 68.9
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 1.5e-134 483.4 349 67.0
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 1.5e-134 483.4 341 67.4
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 1.5e-134 483.4 349 67.6
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 3.3e-134 482.3 347 68.0
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 1.7e-133 479.9 347 67.4
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.2e-133 479.6 346 67.6
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.8e-133 479.2 346 66.5
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 2.8e-133 479.2 344 66.6
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 3.7e-133 478.8 347 65.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.8e-133 478.4 346 67.6
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 4.8e-133 478.4 348 65.2
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 6.3e-133 478.0 339 67.3
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 8.2e-133 477.6 347 67.1
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 1.1e-132 477.2 346 67.6
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.4e-132 476.9 347 66.3
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 7.0e-132 474.6 347 65.7
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.5e-131 473.4 348 65.5
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 2.6e-131 472.6 346 65.9
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 2.6e-131 472.6 338 66.6
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 5.9e-131 471.5 347 64.8
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.4e-129 466.8 348 65.5
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 4.2e-129 465.3 335 66.3
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 2.1e-128 463.0 348 61.5
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 4.7e-128 461.8 346 63.9
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 6.1e-128 461.5 348 61.2
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 1.0e-127 460.7 304 72.7
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.0e-127 460.7 348 61.2
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 1.4e-127 460.3 337 67.1
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 2.3e-127 459.5 348 61.2
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.1e-126 457.2 350 65.1
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 3.3e-126 455.7 348 60.6
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.7e-125 453.4 348 60.3
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 2.2e-125 453.0 348 60.1
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 1.1e-124 450.7 348 59.8
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 4.1e-124 448.7 345 60.0
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 7.0e-124 448.0 346 60.1
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 2.0e-123 446.4 346 59.5
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.6e-123 446.0 341 63.0
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 4.5e-123 445.3 349 63.9
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 7.7e-123 444.5 341 61.3
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 1.3e-122 443.7 346 63.6
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.2e-122 443.0 345 63.5
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 5.0e-122 441.8 371 60.1
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 9.4e-121 437.6 341 60.4
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 3.6e-120 435.6 362 59.7
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.7e-115 419.5 329 63.2
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 5.0e-114 415.2 341 57.8
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.8e-111 406.8 303 64.7
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 1.3e-109 400.6 411 48.4
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.1e-108 397.5 352 56.0
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 2.7e-99 366.3 347 54.8
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 2.0e-94 350.1 334 51.8
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 7.8e-91 338.2 357 48.7
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.9e-89 333.6 304 57.2
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 8.9e-87 324.7 310 52.9
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 1.7e-85 320.5 261 60.9
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 2.9e-85 319.7 342 48.5
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 4.6e-83 312.4 219 67.1
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 1.0e-82 311.2 347 49.0
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 1.3e-82 310.8 253 62.5
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 2.3e-82 310.1 343 50.4
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 3.9e-82 309.3 220 67.3
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 3.3e-81 306.2 281 52.3
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.5e-75 286.2 298 49.0
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 4.3e-73 279.3 277 50.2
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.7e-69 267.3 287 47.7
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 4.9e-69 265.8 141 92.9
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 4.2e-68 262.7 174 73.6
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 3.5e-67 259.6 200 62.0
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.1e-56 223.8 247 47.0
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.0e-50 203.4 184 56.5
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.2e-44 183.3 160 58.8
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 5.7e-41 172.6 116 68.1
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 2.1e-40 170.6 122 64.8
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 5.5e-28 129.4 269 31.6
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 3.2e-12 77.0 40 92.5
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 3.2e-12 77.0 58 62.1
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 2.7e-11 73.9 39 92.3
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 4.7e-11 73.2 42 81.0
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 1.1e-09 68.6 40 77.5


User provided reference genes

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