Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.3e-84 314.7 168 100.0
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.6e-78 296.2 168 94.6
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.8e-69 266.2 170 82.9
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 8.2e-67 257.3 168 81.5
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 1.9e-63 246.1 168 75.6
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 1.9e-63 246.1 168 75.0
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 2.5e-63 245.7 168 76.8
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 4.2e-63 245.0 168 77.4
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.2e-62 243.4 167 73.7
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.6e-62 243.0 168 75.0
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 2.7e-62 242.3 168 75.6
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 3.5e-62 241.9 168 76.8
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 3.5e-62 241.9 168 76.2
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 3.5e-62 241.9 168 76.8
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 4.6e-62 241.5 168 76.2
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 1.0e-61 240.4 170 73.5
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.3e-61 240.0 169 76.3
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.3e-61 240.0 168 73.8
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.8e-61 239.6 168 73.2
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 3.0e-61 238.8 169 74.6
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 3.0e-61 238.8 169 74.6
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 3.9e-61 238.4 168 73.8
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 3.9e-61 238.4 169 75.7
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 3.9e-61 238.4 168 73.2
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 6.7e-61 237.7 172 76.2
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 6.7e-61 237.7 169 72.8
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 8.7e-61 237.3 168 74.4
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 8.7e-61 237.3 168 73.8
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 1.1e-60 236.9 171 74.9
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 1.5e-60 236.5 168 73.2
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.5e-60 236.5 168 72.6
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.9e-60 236.1 168 72.0
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 1.9e-60 236.1 169 74.6
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 2.5e-60 235.7 170 75.3
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 2.5e-60 235.7 169 74.6
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 3.3e-60 235.3 168 74.4
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 4.3e-60 235.0 169 74.0
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 4.3e-60 235.0 168 73.8
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 7.4e-60 234.2 168 73.2
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.3e-59 233.4 169 74.6
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 1.3e-59 233.4 169 72.8
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 2.8e-59 232.3 170 71.8
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 2.8e-59 232.3 170 72.9
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 3.7e-59 231.9 169 74.0
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 3.7e-59 231.9 168 72.6
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 8.2e-59 230.7 169 72.2
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 1.1e-58 230.3 168 70.8
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.1e-58 230.3 168 71.4
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 1.1e-58 230.3 169 71.6
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 1.4e-58 229.9 168 71.4
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 1.4e-58 229.9 170 71.8
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.8e-58 229.6 169 73.4
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 4.1e-58 228.4 172 70.9
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 4.1e-58 228.4 170 72.4
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 4.1e-58 228.4 170 73.5
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 4.1e-58 228.4 168 71.4
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 4.1e-58 228.4 168 71.4
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 5.3e-58 228.0 169 70.4
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 5.3e-58 228.0 168 70.8
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 5.3e-58 228.0 162 74.7
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 9.0e-58 227.3 170 71.8
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.5e-57 226.5 170 71.2
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.0e-57 226.1 173 72.3
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 4.5e-57 224.9 170 70.6
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 4.5e-57 224.9 164 72.6
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 5.9e-57 224.6 169 71.6
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 5.9e-57 224.6 169 70.4
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 1.0e-56 223.8 171 70.2
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 1.7e-56 223.0 169 71.6
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 1.7e-56 223.0 169 71.6
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 1.7e-56 223.0 169 71.6
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.2e-56 222.6 169 72.2
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 2.2e-56 222.6 164 72.6
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 2.9e-56 222.2 171 71.3
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 2.9e-56 222.2 168 67.9
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.9e-56 222.2 169 71.6
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 69.8
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 1.1e-55 220.3 169 71.0
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 1.4e-55 219.9 168 70.8
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 1.4e-55 219.9 168 70.8
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 1.4e-55 219.9 169 68.6
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 1.9e-55 219.5 168 69.6
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 1.9e-55 219.5 169 70.4
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 1.9e-55 219.5 169 70.4
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 1.9e-55 219.5 168 69.6
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 2.5e-55 219.2 169 68.6
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 2.5e-55 219.2 165 70.3
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 5.5e-55 218.0 172 65.7
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 5.5e-55 218.0 176 69.9
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 5.5e-55 218.0 176 69.9
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 7.2e-55 217.6 164 69.5
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 1.2e-54 216.9 168 70.8
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 1.2e-54 216.9 168 70.8
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.2e-54 216.9 170 67.6
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 1.6e-54 216.5 172 67.4
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 168 70.2
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 2.1e-54 216.1 169 70.4
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 68.5
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 70.2
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 66.1
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 3.6e-54 215.3 172 67.4
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 3.6e-54 215.3 169 69.2
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 3.6e-54 215.3 168 66.7
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 4.6e-54 214.9 169 68.0
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 6.1e-54 214.5 169 68.0
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 7.9e-54 214.2 168 66.7
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 1.0e-53 213.8 168 66.1
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-53 213.4 170 67.1
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.4e-53 213.4 170 69.4
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.4e-53 213.4 171 64.3
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 3.0e-53 212.2 168 64.3
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 68.8
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 68.8
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 68.8
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 3.0e-53 212.2 176 68.2
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 3.9e-53 211.8 168 66.7
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 5.1e-53 211.5 171 66.1
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 5.1e-53 211.5 171 66.1
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 6.7e-53 211.1 168 66.1
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 6.7e-53 211.1 171 66.1
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 6.7e-53 211.1 165 69.7
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 8.8e-53 210.7 171 65.5
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 8.8e-53 210.7 171 66.1
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 1.1e-52 210.3 169 68.6
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 1.5e-52 209.9 168 67.3
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.0e-52 209.5 163 68.1
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 3.3e-52 208.8 157 71.3
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 3.3e-52 208.8 169 68.0
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 7.4e-52 207.6 154 71.4
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 2.8e-51 205.7 170 69.4
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.8e-50 203.0 170 64.7
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 1.8e-50 203.0 168 66.1
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 4.1e-50 201.8 145 75.9
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 6.9e-50 201.1 165 63.0
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 9.1e-50 200.7 172 66.9
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 2.6e-49 199.1 171 64.3
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 4.5e-49 198.4 169 65.7
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 1.7e-48 196.4 162 65.4
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 5.7e-44 181.4 102 82.4
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 5.3e-42 174.9 169 59.8
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 7.0e-42 174.5 102 79.4
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 1.6e-41 173.3 100 81.0
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 3.5e-41 172.2 100 79.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 1.0e-40 170.6 157 61.1
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 3.8e-40 168.7 170 58.8
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 1.9e-39 166.4 169 58.0
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 2.7e-38 162.5 125 69.6
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 8.2e-35 151.0 171 49.7
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 5.3e-34 148.3 217 46.5
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 1.7e-32 143.3 174 46.6
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.2e-32 142.9 174 47.1
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 8.5e-32 141.0 179 45.3
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.2e-31 139.0 171 46.8
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.2e-29 131.7 70 87.1
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.2e-28 130.6 70 87.1
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 1.7e-27 126.7 140 50.0
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 6.3e-27 124.8 128 53.1
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 8.3e-27 124.4 169 47.9
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 2.7e-25 119.4 173 46.8
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 1.7e-24 116.7 179 46.9
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 7.2e-23 111.3 162 40.1
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.5e-20 103.6 81 66.7
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.0e-20 103.2 67 74.6
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 1.9e-15 86.7 44 88.6
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 8.6e-08 61.2 70 58.6
TAR628G0544 Trochodendron aralioides HOM05D004247 ORTHO05D004994 2.8e-06 56.2 63 58.7


User provided reference genes

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