Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.3e-41 172.6 84 100.0
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 5.6e-40 167.2 84 95.2
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 5.6e-40 167.2 84 94.0
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 5.6e-40 167.2 84 94.0
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 7.3e-40 166.8 84 95.2
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 1.2e-39 166.0 84 92.9
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.4e-38 162.5 84 90.5
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 1.8e-38 162.2 84 92.9
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 8.9e-38 159.8 84 91.7
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 2.6e-37 158.3 84 89.3
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 4.4e-37 157.5 84 86.9
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 7.5e-37 156.8 84 86.9
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 1.3e-36 156.0 84 88.1
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 1.3e-36 156.0 84 88.1
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 2.2e-36 155.2 84 86.9
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 3.7e-36 154.5 84 86.9
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 3.7e-36 154.5 84 88.1
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.8e-35 152.1 84 83.3
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 1.8e-35 152.1 84 84.5
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 1.8e-35 152.1 84 86.9
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.8e-35 152.1 84 85.7
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 2.4e-35 151.8 84 85.7
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 3.2e-35 151.4 84 85.7
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 4.1e-35 151.0 84 83.3
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 4.1e-35 151.0 84 83.3
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 5.4e-35 150.6 84 85.7
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 7.0e-35 150.2 84 82.1
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 9.2e-35 149.8 84 83.3
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 1.2e-34 149.4 84 82.1
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.6e-34 149.1 84 85.7
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 1.6e-34 149.1 84 83.3
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.0e-34 148.7 84 83.3
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.7e-34 148.3 84 83.3
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 3.5e-34 147.9 82 85.4
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 3.5e-34 147.9 84 83.3
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 4.6e-34 147.5 84 81.0
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 4.6e-34 147.5 84 82.1
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 4.6e-34 147.5 84 79.8
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 7.8e-34 146.7 84 81.0
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 7.8e-34 146.7 84 81.0
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 7.8e-34 146.7 84 82.1
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 7.8e-34 146.7 84 82.1
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 7.8e-34 146.7 84 79.8
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 1.0e-33 146.4 84 81.0
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 1.3e-33 146.0 84 79.8
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 1.3e-33 146.0 84 79.8
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 1.3e-33 146.0 84 79.8
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 1.7e-33 145.6 84 81.0
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.7e-33 145.6 84 81.0
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 2.3e-33 145.2 84 81.0
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 3.0e-33 144.8 79 87.3
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 3.0e-33 144.8 84 82.1
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 6.6e-33 143.7 84 77.4
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 6.6e-33 143.7 84 77.4
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 6.6e-33 143.7 84 81.0
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 6.6e-33 143.7 84 82.1
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 1.1e-32 142.9 84 78.6
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 1.5e-32 142.5 84 76.2
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 1.9e-32 142.1 84 78.6
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 2.5e-32 141.7 84 78.6
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 2.5e-32 141.7 84 77.4
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 3.3e-32 141.4 84 79.8
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 3.3e-32 141.4 84 79.8
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 4.3e-32 141.0 84 79.8
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 4.3e-32 141.0 84 79.8
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 5.6e-32 140.6 84 73.8
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 7.3e-32 140.2 84 78.6
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 7.3e-32 140.2 84 79.8
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 9.5e-32 139.8 84 78.6
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 9.5e-32 139.8 84 73.8
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 1.2e-31 139.4 84 79.8
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 2.1e-31 138.7 83 77.1
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 2.1e-31 138.7 83 79.5
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 2.8e-31 138.3 84 79.8
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 3.6e-31 137.9 82 78.0
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 3.6e-31 137.9 84 77.4
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 3.6e-31 137.9 84 81.0
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 4.7e-31 137.5 80 83.8
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 6.2e-31 137.1 84 73.8
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 8.0e-31 136.7 84 78.6
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 8.0e-31 136.7 84 77.4
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 8.0e-31 136.7 84 75.0
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 2.3e-30 135.2 84 76.2
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 3.1e-30 134.8 82 76.8
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 3.1e-30 134.8 82 76.8
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 3.1e-30 134.8 82 76.8
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 3.1e-30 134.8 82 76.8
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 6.8e-30 133.7 83 73.5
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.2e-29 132.9 83 73.5
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.5e-29 132.5 84 81.0
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 5.8e-29 130.6 84 75.0
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 5.8e-29 130.6 84 75.0
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 2.2e-28 128.6 84 72.6
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 2.9e-28 128.3 84 70.2
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.9e-28 128.3 84 73.8
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 2.9e-28 128.3 84 75.0
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 3.7e-28 127.9 84 72.6
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 4.1e-27 124.4 84 66.7
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.2e-26 122.9 93 67.7
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 6.0e-26 120.6 93 66.7
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 3.9e-25 117.9 82 65.9
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 5.0e-25 117.5 84 64.3
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 1.5e-24 115.9 84 65.5
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 5.6e-24 114.0 65 81.5
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 2.3e-22 108.6 64 79.7
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 3.1e-22 108.2 66 80.3
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 6.8e-22 107.1 65 70.8
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 1.1e-19 99.8 82 54.9
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 3.3e-16 88.2 43 88.4
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 9.5e-16 86.7 78 59.0
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 8.9e-14 80.1 82 50.0
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 1.2e-13 79.7 82 52.4
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 1.1e-11 73.2 83 43.4
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 2.1e-10 68.9 40 77.5
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 2.7e-10 68.6 81 44.4
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 3.5e-10 68.2 85 43.5
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 4.6e-10 67.8 72 51.4
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 1.7e-09 65.9 62 53.2
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 9.6e-08 60.1 37 73.0
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 2.8e-07 58.5 36 69.4


User provided reference genes

Program Settings