Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 0.0e+00 1247.3 674 100.0
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 0.0e+00 1218.4 674 95.7
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 0.0e+00 1137.9 674 88.7
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 0.0e+00 1124.8 674 88.1
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 0.0e+00 1124.4 674 88.1
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 0.0e+00 1117.1 674 88.1
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 0.0e+00 1114.4 676 86.7
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 0.0e+00 1113.6 678 87.8
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 8.6e-293 1010.0 675 81.2
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 3.1e-290 1001.5 682 80.2
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.0e-253 878.6 729 70.1
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 1.4e-250 869.8 682 73.6
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 3.2e-247 858.6 700 67.7
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 4.2e-247 858.2 694 70.7
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 2.7e-238 828.9 693 70.7
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 2.0e-236 822.8 711 69.6
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 4.4e-236 821.6 689 66.5
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 2.2e-235 819.3 688 68.8
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 1.0e-232 810.4 697 65.4
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 2.9e-232 808.9 688 68.9
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 3.2e-231 805.4 694 69.3
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 4.2e-231 805.1 717 64.7
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 4.2e-231 805.1 697 65.0
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 5.5e-231 804.7 690 69.0
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 8.8e-229 797.3 695 67.6
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 2.0e-228 796.2 680 66.6
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 2.0e-228 796.2 694 66.3
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 4.8e-227 791.6 694 63.5
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 2.4e-226 789.3 698 64.5
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 1.2e-225 786.9 697 66.6
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 2.9e-224 782.3 697 64.6
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 2.5e-223 779.2 697 62.8
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 3.2e-223 778.9 695 64.6
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 5.5e-223 778.1 694 66.0
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 3.0e-221 772.3 697 62.6
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 5.2e-221 771.5 689 66.2
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 1.5e-220 770.0 693 63.8
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 2.8e-219 765.8 707 61.5
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 2.4e-218 762.7 680 66.8
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 3.8e-216 755.4 718 60.3
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 5.0e-216 755.0 698 61.0
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 5.5e-215 751.5 718 60.4
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 7.2e-215 751.1 681 63.1
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 1.2e-214 750.4 695 61.4
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 4.7e-214 748.4 712 61.0
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 6.1e-214 748.0 710 60.4
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 2.3e-213 746.1 696 66.7
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 5.4e-210 734.9 714 60.1
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 3.5e-209 732.3 715 60.0
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 1.5e-207 726.9 689 60.7
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 3.3e-207 725.7 678 62.4
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 1.2e-206 723.8 696 62.2
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 2.1e-206 723.0 698 59.6
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 4.7e-206 721.8 712 61.4
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 1.4e-205 720.3 724 57.7
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 1.8e-205 719.9 697 59.0
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 2.0e-204 716.5 694 59.1
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 3.4e-204 715.7 702 59.1
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 1.7e-203 713.4 682 61.1
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 4.9e-203 711.8 659 61.8
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 1.3e-200 703.7 704 58.5
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 3.8e-200 702.2 714 62.0
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 3.3e-199 699.1 683 63.5
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 1.2e-198 697.2 704 58.2
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 6.1e-198 694.9 704 57.4
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 8.0e-198 694.5 682 60.9
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 6.8e-197 691.4 692 57.9
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 2.0e-196 689.9 709 57.3
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 7.5e-196 688.0 683 63.0
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 9.2e-194 681.0 712 61.9
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 1.2e-193 680.6 737 56.2
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 6.0e-193 678.3 702 56.7
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 1.0e-192 677.6 690 60.6
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 1.0e-192 677.6 692 61.7
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 1.3e-192 677.2 715 56.1
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 1.9e-191 673.3 705 56.5
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 2.5e-191 672.9 696 57.3
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 3.3e-191 672.5 681 62.6
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 4.3e-191 672.2 698 59.2
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 9.5e-191 671.0 715 55.9
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 1.6e-190 670.2 691 60.1
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 3.6e-190 669.1 609 61.9
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 5.2e-189 665.2 667 63.6
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 9.8e-188 661.0 708 57.1
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 1.7e-187 660.2 696 59.9
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 1.9e-183 646.7 706 55.1
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 2.5e-183 646.4 690 56.5
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 2.5e-183 646.4 690 56.5
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.6e-182 643.7 687 56.9
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 1.2e-180 637.5 690 56.4
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 6.4e-179 631.7 706 55.7
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 8.3e-179 631.3 703 56.3
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 5.4e-178 628.6 708 54.1
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 1.2e-177 627.5 521 63.9
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.2e-169 600.9 722 53.0
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 2.7e-169 599.7 562 59.6
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 1.3e-168 597.4 628 58.6
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 3.4e-164 582.8 564 58.9
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 5.8e-164 582.0 729 51.9
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 9.9e-164 581.3 562 59.4
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 3.5e-161 572.8 539 60.7
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 3.8e-155 552.7 531 59.5
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 3.9e-152 542.7 567 58.6
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 2.5e-151 540.0 555 56.0
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 4.8e-150 535.8 533 58.3
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 2.5e-146 523.5 436 72.5
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 4.6e-145 519.2 588 53.6
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 4.0e-141 506.1 491 59.1
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 8.4e-139 498.4 693 46.9
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 2.7e-137 493.4 671 48.3
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 4.8e-118 429.5 349 66.2
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 1.6e-113 414.5 385 58.4
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 2.0e-111 407.5 327 68.8
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 4.1e-109 399.8 356 68.0
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 1.5e-106 391.3 563 43.3
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 1.2e-105 388.3 352 63.9
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 4.0e-104 383.3 318 65.1
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 1.4e-101 374.8 326 63.5
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 4.5e-92 343.2 789 32.6
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 6.6e-91 339.3 805 33.2
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 2.3e-88 330.9 370 51.9
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 1.7e-78 298.1 369 50.4
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 3.6e-65 253.8 366 49.2
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.1e-61 242.3 293 51.9
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-60 236.5 328 50.6
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 1.7e-59 235.0 410 39.5
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 6.6e-59 233.0 282 51.8
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 3.8e-54 217.2 143 79.0
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.5e-50 205.3 125 81.6
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 1.1e-48 199.1 240 50.8
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 8.7e-43 179.5 269 43.5
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 5.6e-42 176.8 209 54.1
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 2.4e-40 171.4 186 46.8
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 1.2e-31 142.5 133 58.6
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 4.6e-28 130.6 113 59.3
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 1.3e-25 122.5 379 28.5
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 6.2e-25 120.2 77 74.0
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 1.5e-23 115.5 79 78.5
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 5.1e-19 100.5 143 65.0
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 7.7e-07 60.1 58 51.7
SEGI_09522 Sequoiadendron giganteum HOM05D000874 ORTHO05D001267 8.5e-06 56.6 55 45.5


User provided reference genes

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