Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001791g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 3.8e-73 278.1 143 100.0
Nitab4.5_0000134g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 5.9e-66 254.2 144 93.8
Peaxi162Scf00006g00149 Petunia axillaris HOM05D004382 ORTHO05D005181 5.9e-58 227.6 139 86.3
GSVIVG01020484001 Vitis vinifera HOM05D004382 ORTHO05D005181 4.7e-55 218.0 140 82.1
TWI38G0625 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 1.2e-53 213.4 144 80.6
CSS0016237 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 2.6e-53 212.2 140 79.3
MSTRG.7052 Avicennia marina HOM05D004382 ORTHO05D005181 5.7e-53 211.1 143 78.3
TWI38G0568 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 7.5e-53 210.7 144 79.9
Gohir.A04G050200 Gossypium hirsutum HOM05D004382 ORTHO05D005181 9.7e-53 210.3 143 79.7
Nitab4.5_0000313g0040 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.7e-52 209.5 133 82.7
Nitab4.5_0002475g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.7e-52 209.5 140 80.0
Gohir.D05G330700 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.2e-52 209.1 143 79.7
Gorai.009G354500 Gossypium raimondii HOM05D004382 ORTHO05D005181 2.2e-52 209.1 143 79.7
Oeu002809.1 Olea europaea HOM05D004382 ORTHO05D005181 2.8e-52 208.8 140 77.9
Prupe.4G143700 Prunus persica HOM05D004382 ORTHO05D005181 3.7e-52 208.4 140 79.3
CSS0001445 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 4.8e-52 208.0 143 79.0
PGR142G2616 Punica granatum HOM05D004382 ORTHO05D005181 6.3e-52 207.6 140 77.1
MD05G1215200 Malus domestica HOM05D004382 ORTHO05D005181 8.2e-52 207.2 143 76.9
CANSAT56G1367 Cannabis sativa HOM05D004382 ORTHO05D005181 1.1e-51 206.8 140 78.6
C06p30200 Brassica napus HOM05D004382 ORTHO05D005181 1.4e-51 206.5 143 76.2
BolC6t38183H Brassica oleracea HOM05D004382 ORTHO05D005181 1.4e-51 206.5 143 76.2
Sabra11G0127600 Salix brachista HOM05D004382 ORTHO05D005181 1.4e-51 206.5 140 78.6
BcaC08g45389 Brassica carinata HOM05D004382 ORTHO05D005181 1.8e-51 206.1 143 76.2
CiPaw.11G067100 Carya illinoinensis HOM05D004382 ORTHO05D005181 1.8e-51 206.1 140 77.1
Glyma.08G173700 Glycine max HOM05D004382 ORTHO05D005181 2.4e-51 205.7 140 77.9
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea HOM05D004382 ORTHO05D005181 4.1e-51 204.9 140 75.7
Phvul.005G055200 Phaseolus vulgaris HOM05D004382 ORTHO05D005181 4.1e-51 204.9 140 77.1
Peaxi162Scf00232g01129 Petunia axillaris HOM05D004382 ORTHO05D005181 5.3e-51 204.5 140 79.3
ClCG07G010700 Citrullus lanatus HOM05D004382 ORTHO05D005181 7.0e-51 204.1 141 79.4
VMungo1080G1647 Vigna mungo HOM05D004382 ORTHO05D005181 7.0e-51 204.1 140 76.4
A07p27340 Brassica napus HOM05D004382 ORTHO05D005181 9.1e-51 203.8 143 76.2
BraA07t30375Z Brassica rapa HOM05D004382 ORTHO05D005181 9.1e-51 203.8 143 76.2
FAN25G3309 Fragaria x ananassa HOM05D004382 ORTHO05D005181 1.2e-50 203.4 140 76.4
Nn3g20146 Nelumbo nucifera HOM05D002089 ORTHO05D011346 1.2e-50 203.4 140 78.6
Sed0014118 Sechium edule HOM05D004382 ORTHO05D005181 1.2e-50 203.4 140 78.6
Aa31LG4G1950 Aethionema arabicum HOM05D004382 ORTHO05D005181 1.6e-50 203.0 143 74.8
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea HOM05D004382 ORTHO05D005181 1.6e-50 203.0 140 75.0
BcaB02g07194 Brassica carinata HOM05D004382 ORTHO05D005181 2.7e-50 202.2 143 75.5
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 2.7e-50 202.2 143 74.8
Thhalv10019302m.g Eutrema salsugineum HOM05D004382 ORTHO05D005181 5.9e-50 201.1 143 74.1
Oeu003841.1 Olea europaea HOM05D004382 ORTHO05D005181 5.9e-50 201.1 142 77.5
SGA_v2.0_scaffold49G18168 Striga asiatica HOM05D004382 ORTHO05D005181 5.9e-50 201.1 140 77.1
Solyc07g066310.3 Solanum lycopersicum HOM05D004382 ORTHO05D005181 1.0e-49 200.3 140 79.3
Sopen07g034490 Solanum pennellii HOM05D004382 ORTHO05D005181 1.0e-49 200.3 140 79.3
BcaB05g25168 Brassica carinata HOM05D004382 ORTHO05D005181 1.3e-49 199.9 143 74.1
Ciclev10022793m.g Citrus clementina HOM05D004382 ORTHO05D005181 1.3e-49 199.9 143 74.8
FAN21G1818 Fragaria x ananassa HOM05D004382 ORTHO05D005181 1.3e-49 199.9 140 75.0
Sed0025739 Sechium edule HOM05D004382 ORTHO05D005181 1.3e-49 199.9 140 77.1
Sp5g34090 Schrenkiella parvula HOM05D004382 ORTHO05D005181 1.7e-49 199.5 143 73.4
ClCG11G016280 Citrullus lanatus HOM05D004382 ORTHO05D005181 2.2e-49 199.1 143 74.8
PGSC0003DMG400022241 Solanum tuberosum HOM05D004382 ORTHO05D005181 2.2e-49 199.1 140 77.9
FvH4_3g16050 Fragaria vesca HOM05D004382 ORTHO05D005181 2.9e-49 198.7 140 75.0
FAN11G1612 Fragaria x ananassa HOM05D004382 ORTHO05D005181 2.9e-49 198.7 140 75.0
vmacro09788 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 2.9e-49 198.7 143 75.5
CsaV3_4G007600 Cucumis sativus L. HOM05D004382 ORTHO05D005181 3.8e-49 198.4 140 76.4
Cc05_g15930 Coffea canephora HOM05D004382 ORTHO05D005181 5.0e-49 198.0 140 77.1
MD10G1198300 Malus domestica HOM05D004382 ORTHO05D005181 5.0e-49 198.0 143 74.8
AUR62004366 Chenopodium quinoa HOM05D004382 ORTHO05D005181 6.5e-49 197.6 141 77.3
Migut.H01700 Erythranthe guttata HOM05D004382 ORTHO05D005181 6.5e-49 197.6 140 75.0
Glyma.15G253700 Glycine max HOM05D004382 ORTHO05D005181 6.5e-49 197.6 140 76.4
Lalb_Chr01g0015971 Lupinus albus HOM05D004382 ORTHO05D005181 6.5e-49 197.6 136 77.9
Potri.001G438700 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.1e-48 196.8 140 73.6
Potri.011G142200 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.1e-48 196.8 140 74.3
Actinidia37109 Actinidia chinensis HOM05D004382 ORTHO05D005181 1.9e-48 196.1 142 76.8
Lj3g0019499 Lotus japonicus HOM05D004382 ORTHO05D005181 1.9e-48 196.1 140 74.3
QL04p074767 Quercus lobata HOM05D004382 ORTHO05D005181 2.5e-48 195.7 139 73.4
Solyc12g017250.2 Solanum lycopersicum HOM05D004382 ORTHO05D005181 2.5e-48 195.7 136 75.7
BcaB02g08662 Brassica carinata HOM05D004382 ORTHO05D005181 3.2e-48 195.3 143 74.1
BcaC03g15860 Brassica carinata HOM05D004382 ORTHO05D005181 4.2e-48 194.9 143 73.4
A02p22470 Brassica napus HOM05D004382 ORTHO05D005181 4.2e-48 194.9 143 73.4
C02p36150 Brassica napus HOM05D004382 ORTHO05D005181 4.2e-48 194.9 143 73.4
BolC2t09629H Brassica oleracea HOM05D004382 ORTHO05D005181 4.2e-48 194.9 143 73.4
BraA02t07252Z Brassica rapa HOM05D004382 ORTHO05D005181 4.2e-48 194.9 143 73.4
CARHR072720 Cardamine hirsuta HOM05D004382 ORTHO05D005181 4.2e-48 194.9 143 74.8
Sopen12g008070 Solanum pennellii HOM05D004382 ORTHO05D005181 4.2e-48 194.9 136 76.5
BcaC08g47468 Brassica carinata HOM05D004382 ORTHO05D005181 7.2e-48 194.1 143 73.4
C06p52920 Brassica napus HOM05D004382 ORTHO05D005181 7.2e-48 194.1 143 73.4
BolC6t40310H Brassica oleracea HOM05D004382 ORTHO05D005181 7.2e-48 194.1 143 73.4
RcHm_v2.0_Chr5g0027021 Rosa chinensis HOM05D004382 ORTHO05D005181 7.2e-48 194.1 140 72.9
A07p44190 Brassica napus HOM05D004382 ORTHO05D005181 9.4e-48 193.7 143 73.4
BraA07t31927Z Brassica rapa HOM05D004382 ORTHO05D005181 9.4e-48 193.7 143 73.4
AUR62022575 Chenopodium quinoa HOM05D004382 ORTHO05D005181 9.4e-48 193.7 141 75.9
TPR.G10344 Trifolium pratense HOM05D004382 ORTHO05D005181 9.4e-48 193.7 140 72.9
AT1G79040 Arabidopsis thaliana HOM05D004382 ORTHO05D005181 1.6e-47 193.0 143 74.1
Psat1g002320 Pisum sativum HOM05D004382 ORTHO05D005181 1.6e-47 193.0 140 72.9
CAN.G943.25 Capsicum annuum HOM05D004382 ORTHO05D005181 2.1e-47 192.6 140 78.6
COL.COLO4_05073 Corchorus olitorius HOM05D004382 ORTHO05D005181 3.6e-47 191.8 144 74.3
SalBow8G0430 Salvia bowleyana HOM05D004382 ORTHO05D005181 3.6e-47 191.8 143 70.6
Sc16g0003480 Simmondsia chinensis HOM05D004382 ORTHO05D005181 4.7e-47 191.4 143 73.4
Manes.15G102500 Manihot esculenta HOM05D004382 ORTHO05D005181 6.1e-47 191.0 142 73.9
Medtr2g064650 Medicago truncatula HOM05D004382 ORTHO05D005181 6.1e-47 191.0 140 72.9
EL10Ac4g08547 Beta vulgaris HOM05D004382 ORTHO05D005181 8.0e-47 190.7 141 75.2
Ca_03704_v3 Cicer arietinum L. HOM05D004382 ORTHO05D005181 8.0e-47 190.7 140 71.4
Lalb_Chr25g0285191 Lupinus albus HOM05D004382 ORTHO05D005181 8.0e-47 190.7 137 74.5
Carub.0002s2591 Capsella rubella HOM05D004382 ORTHO05D005181 1.0e-46 190.3 143 72.7
Gorai.002G032900 Gossypium raimondii HOM05D004382 ORTHO05D005181 1.0e-46 190.3 147 74.8
MSTRG.14535 Avicennia marina HOM05D004382 ORTHO05D005181 1.4e-46 189.9 143 72.0
Ah.08g216320 Amaranthus hybridus HOM05D004382 ORTHO05D005181 1.8e-46 189.5 140 74.3
unitig_8.g4771 Utricularia gibba HOM05D004382 ORTHO05D005181 1.8e-46 189.5 140 70.7
Eucgr.F01447 Eucalyptus grandis HOM05D004382 ORTHO05D005181 2.3e-46 189.1 159 69.2
HanXRQChr08g0232801 Helianthus annuus HOM05D004382 ORTHO05D005181 3.0e-46 188.7 140 74.3
Thecc.07G156900 Theobroma cacao HOM05D004382 ORTHO05D005181 5.2e-46 188.0 143 73.4
Potri.001G438800 Populus trichocarpa HOM05D004382 ORTHO05D005181 8.8e-46 187.2 145 71.7
MBI02_g25371_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 1.2e-45 186.8 140 73.6
Gohir.A01G037100 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.0e-45 186.0 144 72.9
Potri.011G142300 Populus trichocarpa HOM05D004382 ORTHO05D005181 2.0e-45 186.0 144 72.2
SalBow5G1313 Salvia bowleyana HOM05D004382 ORTHO05D005181 4.4e-45 184.9 140 74.3
SalBow5G2519 Salvia bowleyana HOM05D004382 ORTHO05D005181 4.4e-45 184.9 140 74.3
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 9.8e-45 183.7 141 71.6
Lalb_Chr03g0031561 Lupinus albus HOM05D004382 ORTHO05D005181 9.8e-45 183.7 143 68.5
Aqoxy1G01569 Aquilegia oxysepala HOM05D004382 ORTHO05D005181 3.7e-44 181.8 141 69.5
Duzib187G1376 Durio zibethinus HOM05D004382 ORTHO05D005181 3.7e-44 181.8 143 71.3
Rhsim04G0006200 Rhododendron simsii HOM05D004382 ORTHO05D005181 3.7e-44 181.8 144 72.2
ATR1098G153 Amborella trichopoda HOM05D004382 ORTHO05D005181 4.8e-44 181.4 144 70.1
CDE04G0985 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 4.8e-44 181.4 143 70.6
Sed0016780 Sechium edule HOM05D004382 ORTHO05D005181 4.8e-44 181.4 136 73.5
TAR627G0744 Trochodendron aralioides HOM05D004382 ORTHO05D005181 6.3e-44 181.0 136 75.0
Atru.chr2.1854 Acer truncatum HOM05D004382 ORTHO05D005181 8.3e-44 180.6 143 71.3
DCAR_013749 Daucus carota HOM05D004382 ORTHO05D005181 8.3e-44 180.6 144 71.5
AL2G39500 Arabidopsis lyrata HOM05D004382 ORTHO05D005181 1.4e-43 179.9 135 72.6
HanXRQChr05g0160651 Helianthus annuus HOM05D004382 ORTHO05D005181 1.4e-43 179.9 141 70.9
THA.LOC104812349 Tarenaya hassleriana HOM05D004382 ORTHO05D005181 1.4e-43 179.9 126 75.4
CDE12G0390 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 2.4e-43 179.1 143 69.2
ECA236G0888 Erigeron canadensis HOM05D004382 ORTHO05D005181 2.4e-43 179.1 140 68.6
DCAR_009633 Daucus carota HOM05D004382 ORTHO05D005181 9.1e-43 177.2 144 69.4
HPP92_016563 Vanilla planifolia HOM05D004382 ORTHO05D005181 2.9e-41 172.2 143 67.8
DCAR_016816 Daucus carota HOM05D004382 ORTHO05D005181 5.0e-41 171.4 140 70.0
Hund10309 Selenicereus undatus HOM05D004382 ORTHO05D005181 1.5e-40 169.9 140 67.9
CDE11G0376 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 1.9e-40 169.5 143 67.1
Os08g0200300 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 2.5e-40 169.1 131 69.5
Manes.03G082900 Manihot esculenta HOM05D004382 ORTHO05D005181 3.3e-40 168.7 143 67.1
Sabra11G0127700 Salix brachista HOM05D004382 ORTHO05D005181 3.3e-40 168.7 145 65.5
PSO541G3267 Papaver somniferum HOM05D004382 ORTHO05D005181 5.5e-40 167.9 145 66.9
PSO675G7775 Papaver somniferum HOM05D004382 ORTHO05D005181 5.5e-40 167.9 145 66.9
vmacro11652 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 1.6e-39 166.4 156 64.7
Lsat_1_v5_gn_7_116120 Lactuca sativa HOM05D004382 ORTHO05D005181 1.4e-38 163.3 144 64.6
Os07g0147550 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 9.8e-37 157.1 142 63.4
Zm00001eb171230 Zea mays HOM05D004382 ORTHO05D005181 9.8e-37 157.1 120 73.3
Sabra16G0296700 Salix brachista HOM05D004382 ORTHO05D005181 2.2e-36 156.0 160 58.8
Eucgr.F03186 Eucalyptus grandis HOM05D004382 ORTHO05D005181 4.9e-36 154.8 109 71.6
Rhsim06G0237200 Rhododendron simsii HOM05D006828 ORTHO05D008312 1.0e-33 147.1 92 81.5
SMO134G0197 Selaginella moellendorffii HOM05D004382 ORTHO05D005181 3.8e-33 145.2 146 57.5
PGSC0003DMG400002312 Solanum tuberosum HOM05D004382 ORTHO05D005181 1.5e-32 143.3 145 62.1
Os07g0147500 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 1.9e-32 142.9 138 56.5
SEGI_14655 Sequoiadendron giganteum HOM05D004382 ORTHO05D005181 9.5e-32 140.6 117 62.4
Gohir.D01G024400 Gossypium hirsutum HOM05D004382 ORTHO05D005181 4.7e-31 138.3 117 68.4
Dinv19628 Davidia involucrata HOM05D006828 ORTHO05D008312 6.1e-31 137.9 89 78.7
Mapoly0001s0109 Marchantia polymorpha HOM05D004382 ORTHO05D005181 4.0e-30 135.2 122 60.7
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis HOM05D004382 ORTHO05D005181 2.4e-27 125.9 142 50.7
Pp3c27_2340 Physcomitrium patens HOM05D004382 ORTHO05D005181 2.0e-26 122.9 138 52.2
MBI18_g37150_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 2.7e-26 122.5 141 54.6
MELO3C016181.2 Cucumis melo HOM05D004382 ORTHO05D005181 6.0e-26 121.3 90 74.4
Cpa.g.c37194 Carica papaya HOM05D004382 ORTHO05D005181 7.8e-26 120.9 93 74.2
Mapoly0006s0055 Marchantia polymorpha HOM05D004382 ORTHO05D005181 1.7e-25 119.8 148 48.0
Pp3c16_5650 Physcomitrium patens HOM05D004382 ORTHO05D005181 5.0e-25 118.2 143 49.7
Pp3c5_4230 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.5e-24 116.7 118 55.9
Pp3c27_2320 Physcomitrium patens HOM05D004382 ORTHO05D005181 2.5e-24 115.9 119 55.5
PGR083G0343 Punica granatum HOM05D004382 ORTHO05D005181 9.5e-24 114.0 83 71.1
CBR_g30109 Chara braunii HOM05D000004 ORTHO05D000002 6.8e-22 107.8 66 74.2
Cpa.g.c38697 Carica papaya HOM05D004382 ORTHO05D005181 7.5e-21 104.4 53 90.6
Haze_08525 Corylus avellana HOM05D004382 ORTHO05D005181 2.2e-20 102.8 143 46.9
PRCOL_00003342 Prasinoderma coloniale HOM05D004382 ORTHO05D005181 7.3e-16 87.8 133 39.8
Atru.chr6.732 Acer truncatum HOM05D004382 ORTHO05D005181 2.3e-14 82.8 83 61.4
TAR626G0945 Trochodendron aralioides HOM05D004382 ORTHO05D005181 1.3e-12 77.0 69 65.2
Cre06.g261000 Chlamydomonas reinhardtii HOM05D004382 ORTHO05D005181 2.2e-12 76.3 136 44.1
TPR.G25891 Trifolium pratense HOM05D004382 ORTHO05D005181 1.8e-06 56.6 136 40.4


User provided reference genes

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