Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001764g0120 Nicotiana tabacum HOM05D000136 ORTHO05D007933 8.1e-64 246.9 123 100.0
Nitab4.5_0005728g0020 Nicotiana tabacum HOM05D000136 ORTHO05D007933 5.3e-39 164.5 180 57.2
Peaxi162Scf00034g00143 Petunia axillaris HOM05D000136 ORTHO05D007933 1.8e-26 122.9 185 43.2
Manes.04G113600 Manihot esculenta HOM05D000136 ORTHO05D007933 6.9e-23 110.9 177 41.2
PGSC0003DMG400028624 Solanum tuberosum HOM05D000136 ORTHO05D007933 3.4e-22 108.6 187 42.2
Oeu027808.1 Olea europaea HOM05D000020 ORTHO05D000543 7.6e-22 107.5 183 40.4
QL05p029505 Quercus lobata HOM05D000136 ORTHO05D007933 7.6e-22 107.5 191 37.2
VMungo0331G0391 Vigna mungo HOM05D000136 ORTHO05D007933 2.9e-21 105.5 179 38.5
Ciclev10026390m.g Citrus clementina HOM05D000136 ORTHO05D007933 3.2e-20 102.1 185 38.9
Nitab4.5_0004236g0080 Nicotiana tabacum HOM05D000136 ORTHO05D007933 3.2e-20 102.1 128 46.1
Gohir.A05G126100 Gossypium hirsutum HOM05D000136 ORTHO05D007933 4.2e-20 101.7 187 36.9
Gohir.D05G127000 Gossypium hirsutum HOM05D000136 ORTHO05D007933 4.2e-20 101.7 187 36.4
Gorai.009G131100 Gossypium raimondii HOM05D000136 ORTHO05D007933 4.2e-20 101.7 187 36.4
Atru.chr1.2988 Acer truncatum HOM05D000136 ORTHO05D007933 1.2e-19 100.1 183 38.8
COL.COLO4_12953 Corchorus olitorius HOM05D000136 ORTHO05D007933 1.2e-19 100.1 183 37.7
Dinv30596 Davidia involucrata HOM05D000136 ORTHO05D007933 1.6e-19 99.8 182 37.4
CAN.G140.17 Capsicum annuum HOM05D000136 ORTHO05D007933 2.1e-19 99.4 181 39.8
Phvul.010G155300 Phaseolus vulgaris HOM05D000136 ORTHO05D007933 2.1e-19 99.4 179 36.9
Sopen12g021990 Solanum pennellii HOM05D000136 ORTHO05D007933 2.1e-19 99.4 198 37.4
Lj3g0013985 Lotus japonicus HOM05D000136 ORTHO05D007933 2.7e-19 99.0 178 37.1
Nitab4.5_0003722g0070 Nicotiana tabacum HOM05D000136 ORTHO05D007933 2.7e-19 99.0 158 41.1
Atru.chr1.2987 Acer truncatum HOM05D000136 ORTHO05D007933 1.0e-18 97.1 182 36.8
TAR625G0530 Trochodendron aralioides HOM05D000136 ORTHO05D007933 2.3e-18 95.9 187 37.4
Nn8g39468 Nelumbo nucifera HOM05D000136 ORTHO05D007933 3.0e-18 95.5 176 38.1
Thecc.06G021900 Theobroma cacao HOM05D000136 ORTHO05D007933 6.7e-18 94.4 184 35.3
Haze_16544 Corylus avellana HOM05D000136 ORTHO05D007933 1.1e-17 93.6 170 40.6
Actinidia01751 Actinidia chinensis HOM05D000136 ORTHO05D007933 2.5e-17 92.4 179 36.3
Duzib160G0787 Durio zibethinus HOM05D000136 ORTHO05D007933 2.5e-17 92.4 184 35.9
Glyma.08G212000 Glycine max HOM05D000136 ORTHO05D007933 5.7e-17 91.3 171 36.3
Eucgr.F03866 Eucalyptus grandis HOM05D000136 ORTHO05D007933 1.7e-16 89.7 186 37.1
MSTRG.9428 Avicennia marina HOM05D000136 ORTHO05D007933 3.7e-16 88.6 183 36.6
Cc04_g04290 Coffea canephora HOM05D000136 ORTHO05D007933 1.1e-15 87.0 170 35.3
GSVIVG01017322001 Vitis vinifera HOM05D000136 ORTHO05D007933 1.1e-15 87.0 183 35.0
THA.LOC104818026 Tarenaya hassleriana HOM05D000136 ORTHO05D007933 3.1e-15 85.5 188 34.0
vmacro18991 Vaccinium macrocarpon HOM05D000136 ORTHO05D007933 6.9e-15 84.3 184 37.0
Cpa.g.sc10.258 Carica papaya HOM05D000136 ORTHO05D007933 1.5e-14 83.2 84 54.8
Potri.001G192600 Populus trichocarpa HOM05D000136 ORTHO05D007933 3.4e-14 82.0 193 33.7
TWI18G0508 Tripterygium wilfordii HOM05D000136 ORTHO05D007933 7.7e-14 80.9 193 33.7
Aqoxy7G02001 Aquilegia oxysepala HOM05D000136 ORTHO05D007933 1.3e-13 80.1 86 50.0
Aqoxy7G02211 Aquilegia oxysepala HOM05D000136 ORTHO05D007933 1.3e-13 80.1 86 50.0
AL1G60810 Arabidopsis lyrata HOM05D000136 ORTHO05D007933 3.8e-13 78.6 183 35.5
Migut.D01069 Erythranthe guttata HOM05D000136 ORTHO05D007933 3.8e-13 78.6 86 50.0
Prupe.3G085200 Prunus persica HOM05D000136 ORTHO05D007933 5.0e-13 78.2 181 35.9
MD17G1209800 Malus domestica HOM05D000136 ORTHO05D007933 6.5e-13 77.8 194 34.5
CANSAT56G3249 Cannabis sativa HOM05D000136 ORTHO05D007933 8.5e-13 77.4 165 33.9
AT1G52560 Arabidopsis thaliana HOM05D000136 ORTHO05D007933 1.1e-12 77.0 176 35.8
CiPaw.01G246600 Carya illinoinensis HOM05D000136 ORTHO05D007933 3.2e-12 75.5 193 31.1
Medtr4g010320 Medicago truncatula HOM05D000136 ORTHO05D007933 3.2e-12 75.5 173 34.1
CARHR042670 Cardamine hirsuta HOM05D000136 ORTHO05D007933 4.2e-12 75.1 184 32.6
Carub.0001s4152 Capsella rubella HOM05D000136 ORTHO05D007933 1.2e-11 73.6 184 31.0
MBI04_g24600_MAGBIO Magnolia biondii HOM05D000136 ORTHO05D007933 1.2e-11 73.6 160 35.0
Thhalv10012289m.g Eutrema salsugineum HOM05D000136 ORTHO05D007933 1.6e-11 73.2 184 32.1
Sp1g39110 Schrenkiella parvula HOM05D000136 ORTHO05D007933 1.6e-11 73.2 180 31.1
arahy.Tifrunner.gnm1.ann1.MVDL02 Arachis hypogaea HOM05D000136 ORTHO05D007933 2.7e-11 72.4 72 51.4
Aa31LG10G2450 Aethionema arabicum HOM05D000136 ORTHO05D007933 3.6e-11 72.0 184 29.3
arahy.Tifrunner.gnm1.ann1.Y4YZQQ Arachis hypogaea HOM05D000136 ORTHO05D007933 3.6e-11 72.0 164 34.8
BraA06t23395Z Brassica rapa HOM05D000136 ORTHO05D007933 7.9e-11 70.9 184 32.1
BcaC08g43428 Brassica carinata HOM05D000136 ORTHO05D007933 1.0e-10 70.5 86 48.8
Lj5C71T5 Lonicera japonica HOM05D000136 ORTHO05D007933 1.0e-10 70.5 80 50.0
ECA247G2241 Erigeron canadensis HOM05D000136 ORTHO05D007933 1.4e-10 70.1 118 35.6
A06p01780 Brassica napus HOM05D000136 ORTHO05D007933 1.8e-10 69.7 88 46.6
CSS0037009 Camellia sinensis var. sinensis HOM05D000136 ORTHO05D007933 1.8e-10 69.7 79 49.4
HanXRQChr04g0097411 Helianthus annuus HOM05D000136 ORTHO05D007933 1.8e-10 69.7 96 41.7
TAR636G1712 Trochodendron aralioides HOM05D000136 ORTHO05D007933 1.8e-10 69.7 183 34.4
HanXRQChr04g0097581 Helianthus annuus HOM05D000136 ORTHO05D007933 2.3e-10 69.3 96 39.6
Lalb_Chr25g0279361 Lupinus albus HOM05D000136 ORTHO05D007933 2.3e-10 69.3 84 44.0
SalBow6G6117 Salvia bowleyana HOM05D000136 ORTHO05D007933 2.3e-10 69.3 170 34.7
C06p07980 Brassica napus HOM05D000136 ORTHO05D007933 3.0e-10 68.9 184 32.1
BolC6t35881H Brassica oleracea HOM05D000136 ORTHO05D007933 3.0e-10 68.9 184 32.1
SalBow6G0095 Salvia bowleyana HOM05D000136 ORTHO05D007933 5.1e-10 68.2 165 35.8
TWI75G1547 Tripterygium wilfordii HOM05D000136 ORTHO05D007933 6.7e-10 67.8 188 29.8
Hma1.2p1_1962F.1_g309220 Hydrangea macrophylla HOM05D000136 ORTHO05D007933 8.8e-10 67.4 87 46.0
AUR62016346 Chenopodium quinoa HOM05D000136 ORTHO05D007933 1.1e-09 67.0 193 29.0
FAN05G4533 Fragaria x ananassa HOM05D000136 ORTHO05D007933 2.6e-09 65.9 95 42.1
PSO017G4440 Papaver somniferum HOM05D000136 ORTHO05D007933 3.3e-09 65.5 120 34.2
Hund00524 Selenicereus undatus HOM05D000136 ORTHO05D007933 7.4e-09 64.3 197 28.9
AUR62011527 Chenopodium quinoa HOM05D000136 ORTHO05D007933 9.7e-09 63.9 193 28.0
FvH4_6g29880 Fragaria vesca HOM05D000136 ORTHO05D007933 9.7e-09 63.9 179 32.4
FAN02G0563 Fragaria x ananassa HOM05D000136 ORTHO05D007933 9.7e-09 63.9 95 41.1
FAN14G4977 Fragaria x ananassa HOM05D000136 ORTHO05D007933 2.2e-08 62.8 179 32.4
PGR102G0618 Punica granatum HOM05D000136 ORTHO05D007933 3.7e-08 62.0 183 31.1
RcHm_v2.0_Chr2g0135771 Rosa chinensis HOM05D000136 ORTHO05D007933 4.8e-08 61.6 177 31.6
MBI04_g24601_MAGBIO Magnolia biondii HOM05D000136 ORTHO05D007933 6.3e-08 61.2 80 40.0
Lsat_1_v5_gn_1_33281 Lactuca sativa HOM05D000136 ORTHO05D007933 1.1e-07 60.5 90 36.7
FAN09G3041 Fragaria x ananassa HOM05D000136 ORTHO05D007933 1.4e-07 60.1 179 32.4
FAN27G3324 Fragaria x ananassa HOM05D000136 ORTHO05D007933 1.4e-07 60.1 81 44.4
EL10Ac9g21910 Beta vulgaris HOM05D000136 ORTHO05D007933 3.1e-07 58.9 168 31.0
CDE04G0680 Ceratophyllum demersum HOM05D001099 ORTHO05D007933 3.1e-07 58.9 178 29.8
ClCG07G012640 Citrullus lanatus HOM05D001011 ORTHO05D007933 3.1e-07 58.9 152 32.2
Psat7g255520 Pisum sativum HOM05D001011 ORTHO05D000851 4.1e-07 58.5 83 42.2
FvH4_6g21590 Fragaria vesca HOM05D000136 ORTHO05D007933 5.3e-07 58.2 81 43.2
FAN01G2502 Fragaria x ananassa HOM05D000136 ORTHO05D007933 5.3e-07 58.2 81 43.2
FAN08G2645 Fragaria x ananassa HOM05D000136 ORTHO05D007933 5.3e-07 58.2 81 43.2
FAN25G3169 Fragaria x ananassa HOM05D000136 ORTHO05D007933 5.3e-07 58.2 81 43.2
FAN15G2544 Fragaria x ananassa HOM05D000136 ORTHO05D007933 9.1e-07 57.4 81 43.2
FAN06G2428 Fragaria x ananassa HOM05D000136 ORTHO05D007933 1.5e-06 56.6 84 41.7
FAN19G1047 Fragaria x ananassa HOM05D000136 ORTHO05D007933 1.5e-06 56.6 76 43.4
FAN26G0497 Fragaria x ananassa HOM05D000136 ORTHO05D007933 2.0e-06 56.2 81 42.0
FAN10G1813 Fragaria x ananassa HOM05D000136 ORTHO05D007933 2.6e-06 55.8 76 43.4
FAN10G4040 Fragaria x ananassa HOM05D000136 ORTHO05D007933 2.6e-06 55.8 81 42.0
SGA_v2.0_scaffold26G11349 Striga asiatica HOM05D000136 ORTHO05D007933 4.5e-06 55.1 172 31.4
Sc10g0005880 Simmondsia chinensis HOM05D000136 ORTHO05D007933 7.7e-06 54.3 90 36.7


User provided reference genes

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