Gene: AT1G52560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G52560
  • Transcript Identifier AT1G52560.2
  • Gene Type Coding gene
  • Location Chr1 : 19574783-19575766 : negative

Gene Family Information

  • ID HOM05D000136
  • #Genes/#Species 2636/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G52560.2
  • uniprot Q9SSQ8

Descriptions

  • Description HSP20-like chaperones superfamily protein
  • Computational description HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 21 (TAIR:AT4G27670.1); Has 5968 Blast hits to 5968 proteins in 1459 species: Archae - 181; Bacteria - 3502; Metazoa - 12; Fungi - 193; Plants - 1259; Viruses - 2; Other Eukaryotes - 819 (source: NCBI BLink).
  • Computational description HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 21 (TAIR:AT4G27670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat Os02g0201000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008978 HSP20-like chaperone
IPR002068 Alpha crystallin/Hsp20 domain
IPR031107 Small heat shock protein HSP20
Mapman id Description
19.1.8.9 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-M-II protein