Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 2.0e-71 272.3 138 100.0
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 6.7e-67 257.3 138 94.9
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 5.2e-51 204.5 138 78.3
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 3.1e-48 195.3 138 74.6
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 9.8e-42 173.7 138 67.4
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.1e-40 170.2 136 64.7
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 2.9e-38 162.2 136 59.6
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 9.4e-37 157.1 135 58.5
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 1.6e-36 156.4 136 55.9
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 6.1e-36 154.5 136 59.6
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 6.1e-36 154.5 142 59.2
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 1.0e-35 153.7 133 59.4
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 1.4e-35 153.3 135 59.3
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 3.0e-35 152.1 136 58.1
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 4.0e-35 151.8 138 58.0
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 5.2e-35 151.4 137 57.7
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 8.8e-35 150.6 136 56.6
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 3.4e-34 148.7 138 54.3
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 5.7e-34 147.9 142 54.9
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 7.5e-34 147.5 139 55.4
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 7.5e-34 147.5 136 56.6
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 9.8e-34 147.1 145 55.2
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 1.3e-33 146.7 132 59.1
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 1.3e-33 146.7 138 55.8
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 1.7e-33 146.4 165 47.9
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 1.7e-33 146.4 151 52.3
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 2.8e-33 145.6 138 54.3
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 2.8e-33 145.6 135 56.3
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 8.3e-33 144.1 136 58.1
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 8.3e-33 144.1 166 52.4
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 1.4e-32 143.3 135 52.6
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 1.4e-32 143.3 136 55.9
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 1.8e-32 142.9 139 57.6
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 3.1e-32 142.1 135 52.6
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 3.1e-32 142.1 152 52.0
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.2e-31 140.2 139 53.2
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 7.7e-31 137.5 134 56.7
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 2.3e-30 136.0 137 53.3
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 3.8e-30 135.2 133 51.9
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 5.0e-30 134.8 145 50.3
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 6.6e-30 134.4 152 46.1
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 1.1e-29 133.7 153 47.1
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 4.2e-29 131.7 163 43.6
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 5.5e-29 131.3 137 55.5
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 7.2e-29 131.0 150 48.7
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 2.8e-28 129.0 166 47.0
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 2.8e-28 129.0 140 54.3
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 3.6e-28 128.6 154 47.4
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 3.6e-28 128.6 135 58.5
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 2.3e-27 125.9 140 47.1
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 4.0e-27 125.2 154 50.0
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 4.0e-27 125.2 171 43.9
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 6.8e-27 124.4 170 43.5
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 1.2e-26 123.6 104 69.2
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 1.5e-26 123.2 140 54.3
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 2.0e-26 122.9 154 46.8
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 2.6e-26 122.5 133 48.9
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.4e-26 122.1 159 47.2
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 4.4e-26 121.7 154 46.1
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 5.7e-26 121.3 157 45.2
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 9.8e-26 120.6 137 50.4
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 9.8e-26 120.6 170 41.2
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 9.8e-26 120.6 137 48.2
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 9.8e-26 120.6 130 50.0
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 1.3e-25 120.2 140 50.7
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 2.2e-25 119.4 133 48.9
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 1.4e-24 116.7 166 42.8
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 2.7e-23 112.5 165 43.6
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 2.7e-23 112.5 173 41.0
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.7e-22 109.8 150 42.0
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.7e-22 109.8 166 41.0
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 2.3e-22 109.4 153 42.5
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 2.3e-22 109.4 136 45.6
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 2.3e-22 109.4 188 39.9
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 6.6e-22 107.8 168 39.9
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 8.6e-22 107.5 137 46.0
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 4.3e-21 105.1 138 44.2
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 9.5e-21 104.0 165 41.8
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 1.6e-20 103.2 165 41.8
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 4.7e-20 101.7 92 54.3
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 4.7e-20 101.7 92 54.3
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 1.8e-19 99.8 139 42.4
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 1.2e-18 97.1 134 41.0
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 2.0e-18 96.3 191 37.2
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 4.4e-18 95.1 165 38.2
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 1.3e-17 93.6 138 42.0
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 1.7e-17 93.2 164 36.0
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 2.2e-17 92.8 136 36.8
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 8.3e-17 90.9 133 42.1
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 5.4e-16 88.2 131 43.5
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 1.2e-15 87.0 196 35.2
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 1.2e-15 87.0 141 38.3
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 2.0e-15 86.3 196 33.7
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 6.0e-15 84.7 84 57.1
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 3.0e-14 82.4 158 36.1
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 5.0e-14 81.6 97 53.6
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 6.6e-14 81.3 42 78.6
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 8.6e-14 80.9 110 46.4
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 7.3e-13 77.8 141 37.6
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.6e-12 76.6 107 43.0
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 1.6e-12 76.6 186 32.3
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 1.6e-12 76.6 78 55.1
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 1.5e-10 70.1 125 40.0
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 2.2e-09 66.2 118 41.5
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 2.9e-09 65.9 53 62.3
unitig_749.g13722 Utricularia gibba HOM05D006778 ORTHO05D008341 2.9e-09 65.9 92 44.6
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 4.9e-09 65.1 130 33.8
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 8.3e-09 64.3 52 65.4
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 2.4e-08 62.8 71 47.9
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 5.4e-08 61.6 95 43.2
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 9.2e-08 60.8 71 46.5
Gohir.A05G416601 Gossypium hirsutum HOM05D006778 ORTHO05D008341 4.6e-07 58.5 96 41.7
Gohir.A05G417001 Gossypium hirsutum HOM05D006778 ORTHO05D008341 4.6e-07 58.5 96 41.7
Gorai.012G000200 Gossypium raimondii HOM05D006778 ORTHO05D008341 4.6e-07 58.5 96 41.7
Gohir.D08G007200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 7.8e-07 57.8 96 41.7
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 3.0e-06 55.8 52 57.7


User provided reference genes

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