Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001702g0190 Nicotiana tabacum HOM05D004437 ORTHO05D005401 2.4e-78 295.4 146 100.0
Nitab4.5_0007346g0070 Nicotiana tabacum HOM05D004437 ORTHO05D005401 1.6e-74 282.7 157 91.1
Nitab4.5_0001127g0160 Nicotiana tabacum HOM05D004437 ORTHO05D005401 1.4e-70 269.6 146 91.1
PGSC0003DMG400013695 Solanum tuberosum HOM05D004437 ORTHO05D005401 1.5e-69 266.2 157 85.4
Solyc05g047690.3 Solanum lycopersicum HOM05D004437 ORTHO05D005401 9.9e-69 263.5 157 84.7
Sopen05g027940 Solanum pennellii HOM05D004437 ORTHO05D005401 9.9e-69 263.5 157 84.7
CAN.G1608.2 Capsicum annuum HOM05D004437 ORTHO05D005401 3.9e-65 251.5 158 81.6
Peaxi162Scf00988g00110 Petunia axillaris HOM05D004437 ORTHO05D005401 1.6e-63 246.1 156 80.8
Dinv43738 Davidia involucrata HOM05D004437 ORTHO05D005401 1.9e-56 222.6 151 78.8
Dinv32406 Davidia involucrata HOM05D004437 ORTHO05D005401 1.8e-54 216.1 150 78.0
Nitab4.5_0004622g0030 Nicotiana tabacum HOM05D004437 ORTHO05D005401 2.0e-53 212.6 121 86.8
MSTRG.25195 Avicennia marina HOM05D004437 ORTHO05D005401 3.4e-53 211.8 158 72.8
Migut.C00761 Erythranthe guttata HOM05D004437 ORTHO05D005401 3.4e-53 211.8 159 73.6
Hma1.2p1_0033F.1_g020790 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 7.6e-53 210.7 157 70.7
Hma1.2p1_2548F.1_g324200 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 7.6e-53 210.7 157 72.0
Actinidia09575 Actinidia chinensis HOM05D004437 ORTHO05D005401 1.6e-50 203.0 155 71.0
Lsat_1_v5_gn_7_6120 Lactuca sativa HOM05D004437 ORTHO05D005401 3.5e-50 201.8 153 71.9
COL.COLO4_12656 Corchorus olitorius HOM05D004437 ORTHO05D005401 3.0e-49 198.7 144 75.7
SalBow7G1560 Salvia bowleyana HOM05D004437 ORTHO05D005401 3.0e-49 198.7 166 68.1
Cc02_g36970 Coffea canephora HOM05D004437 ORTHO05D005401 5.1e-49 198.0 164 66.5
MSTRG.1255 Avicennia marina HOM05D004437 ORTHO05D005401 6.7e-49 197.6 160 68.1
CSS0004475 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 6.7e-49 197.6 106 89.6
CSS0011172 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 6.7e-49 197.6 106 88.7
Gohir.D11G087600 Gossypium hirsutum HOM05D004437 ORTHO05D005401 1.9e-48 196.1 155 72.3
HanXRQChr06g0169271 Helianthus annuus HOM05D004437 ORTHO05D005401 1.9e-48 196.1 152 70.4
Gohir.A11G083500 Gossypium hirsutum HOM05D004437 ORTHO05D005401 2.5e-48 195.7 155 72.3
Gorai.007G093600 Gossypium raimondii HOM05D004437 ORTHO05D005401 2.5e-48 195.7 155 72.3
HanXRQChr04g0122121 Helianthus annuus HOM05D004437 ORTHO05D005401 4.3e-48 194.9 147 70.7
SGA_v2.0_scaffold201G41379 Striga asiatica HOM05D000186 ORTHO05D001124 7.4e-48 194.1 145 70.3
Thecc.01G371500 Theobroma cacao HOM05D004437 ORTHO05D005401 7.4e-48 194.1 155 70.3
Duzib138G0705 Durio zibethinus HOM05D004437 ORTHO05D005401 9.6e-48 193.7 155 72.3
Duzib133G0135 Durio zibethinus HOM05D004437 ORTHO05D005401 2.8e-47 192.2 155 72.3
TAR374G0190 Trochodendron aralioides HOM05D004437 ORTHO05D005401 6.2e-47 191.0 149 71.1
ClCG00G000160 Citrullus lanatus HOM05D004437 ORTHO05D005401 1.4e-46 189.9 135 74.1
ClCG10G003410 Citrullus lanatus HOM05D004437 ORTHO05D005401 1.4e-46 189.9 135 74.1
CsaV3_3G003440 Cucumis sativus L. HOM05D004437 ORTHO05D005401 2.4e-46 189.1 147 70.1
MELO3C014010.2 Cucumis melo HOM05D004437 ORTHO05D005401 3.1e-46 188.7 147 69.4
Carub.0004s2829 Capsella rubella HOM05D004437 ORTHO05D005401 5.3e-46 188.0 156 66.7
Nn1g01279 Nelumbo nucifera HOM05D004437 ORTHO05D005401 5.3e-46 188.0 149 70.5
Eucgr.E01334 Eucalyptus grandis HOM05D004437 ORTHO05D005401 6.9e-46 187.6 126 77.0
SGA_v2.0_scaffold11G05840 Striga asiatica HOM05D000186 ORTHO05D001124 6.9e-46 187.6 145 69.7
Lsat_1_v5_gn_7_59201 Lactuca sativa HOM05D004437 ORTHO05D005401 1.2e-45 186.8 162 64.8
DCAR_006889 Daucus carota HOM05D004437 ORTHO05D005401 1.5e-45 186.4 144 69.4
ECA236G3516 Erigeron canadensis HOM05D004437 ORTHO05D005401 1.5e-45 186.4 134 71.6
BcaB02g09022 Brassica carinata HOM05D004437 ORTHO05D005401 3.4e-45 185.3 156 65.4
A05p05600 Brassica napus HOM05D004437 ORTHO05D005401 3.4e-45 185.3 156 64.7
C04p06550 Brassica napus HOM05D004437 ORTHO05D005401 4.5e-45 184.9 156 65.4
BolC4t22280H Brassica oleracea HOM05D004437 ORTHO05D005401 4.5e-45 184.9 156 65.4
Ciclev10022649m.g Citrus clementina HOM05D004437 ORTHO05D005401 4.5e-45 184.9 148 68.9
unitig_578.g16077 Utricularia gibba HOM05D002183 ORTHO05D002169 4.5e-45 184.9 147 68.7
Aqoxy5G03951 Aquilegia oxysepala HOM05D004437 ORTHO05D005401 5.8e-45 184.5 140 70.0
SEGI_23012 Sequoiadendron giganteum HOM05D004437 ORTHO05D005401 5.8e-45 184.5 161 65.2
Manes.01G263900 Manihot esculenta HOM05D004437 ORTHO05D005401 7.6e-45 184.1 156 68.6
CARHR140860 Cardamine hirsuta HOM05D004437 ORTHO05D005401 1.3e-44 183.3 156 66.0
Sp4g27680 Schrenkiella parvula HOM05D004437 ORTHO05D005401 1.3e-44 183.3 156 66.0
AL4G44810 Arabidopsis lyrata HOM05D004437 ORTHO05D005401 4.9e-44 181.4 156 64.7
CiPaw.12G100900 Carya illinoinensis HOM05D004437 ORTHO05D005401 4.9e-44 181.4 148 68.2
PGR042G1009 Punica granatum HOM05D004437 ORTHO05D005401 6.5e-44 181.0 154 67.5
GSVIVG01027575001 Vitis vinifera HOM05D004437 ORTHO05D005401 6.5e-44 181.0 150 68.0
Haze_08988 Corylus avellana HOM05D004437 ORTHO05D005401 1.4e-43 179.9 170 61.8
Thhalv10001671m.g Eutrema salsugineum HOM05D004437 ORTHO05D005401 2.5e-43 179.1 156 64.7
CiPaw.01G258300 Carya illinoinensis HOM05D004437 ORTHO05D005401 3.2e-43 178.7 155 66.5
Manes.05G042100 Manihot esculenta HOM05D004437 ORTHO05D005401 5.5e-43 177.9 140 71.4
THA.LOC104802003 Tarenaya hassleriana HOM05D004437 ORTHO05D005401 5.5e-43 177.9 137 68.6
vmacro13357 Vaccinium macrocarpon HOM05D004437 ORTHO05D005401 7.1e-43 177.6 207 52.2
Cfa012070 Carpinus fangiana HOM05D004437 ORTHO05D005401 9.3e-43 177.2 160 64.4
QL08p051220 Quercus lobata HOM05D004437 ORTHO05D005401 9.3e-43 177.2 152 67.8
Sc22g0000410 Simmondsia chinensis HOM05D004437 ORTHO05D005401 9.3e-43 177.2 126 72.2
CDE06G2826 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 1.2e-42 176.8 151 68.2
Sed0010224 Sechium edule HOM05D004437 ORTHO05D005401 1.2e-42 176.8 163 61.3
Lj3g0004540 Lotus japonicus HOM05D004437 ORTHO05D005401 2.1e-42 176.0 147 65.3
AT2G45640 Arabidopsis thaliana HOM05D004437 ORTHO05D005401 2.7e-42 175.6 156 63.5
RcHm_v2.0_Chr1g0351651 Rosa chinensis HOM05D004437 ORTHO05D005401 3.5e-42 175.3 140 68.6
TWI23G1180 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 3.5e-42 175.3 155 65.8
Zm00001eb230470 Zea mays HOM05D004437 ORTHO05D005401 6.0e-42 174.5 138 68.8
ATR0661G478 Amborella trichopoda HOM05D004437 ORTHO05D005401 7.9e-42 174.1 147 65.3
CANSAT21G0327 Cannabis sativa HOM05D004437 ORTHO05D005401 1.3e-41 173.3 123 74.0
VMungo0331G2039 Vigna mungo HOM05D004437 ORTHO05D005401 3.0e-41 172.2 126 72.2
Os02g0122000 Oryza sativa ssp. japonica HOM05D004437 ORTHO05D005401 3.9e-41 171.8 145 66.2
MELO3C006160.2 Cucumis melo HOM05D004437 ORTHO05D005401 5.1e-41 171.4 126 70.6
Atru.chr9.1501 Acer truncatum HOM05D004437 ORTHO05D005401 6.7e-41 171.0 147 67.3
CsaV3_3G009410 Cucumis sativus L. HOM05D004437 ORTHO05D005401 6.7e-41 171.0 140 66.4
MBI04_g06621_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 6.7e-41 171.0 107 80.4
Phvul.010G087700 Phaseolus vulgaris HOM05D004437 ORTHO05D005401 6.7e-41 171.0 126 71.4
TWI14G0837 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 8.7e-41 170.6 157 65.6
MBI04_g34692_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 1.1e-40 170.2 105 81.9
Glyma.03G019600 Glycine max HOM05D004437 ORTHO05D005401 1.5e-40 169.9 126 71.4
FAN04G1903 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.9e-40 169.5 147 61.9
RcHm_v2.0_Chr7g0199901 Rosa chinensis HOM05D004437 ORTHO05D005401 1.9e-40 169.5 147 62.6
Atru.chr5.365 Acer truncatum HOM05D004437 ORTHO05D005401 2.5e-40 169.1 147 68.0
BraA05t19533Z Brassica rapa HOM05D004437 ORTHO05D005401 2.5e-40 169.1 158 61.4
Lalb_Chr10g0097651 Lupinus albus HOM05D004437 ORTHO05D005401 2.5e-40 169.1 148 66.9
TAR629G1686 Trochodendron aralioides HOM05D004437 ORTHO05D005401 2.5e-40 169.1 125 71.2
Ah.12g057860 Amaranthus hybridus HOM05D004437 ORTHO05D005401 4.3e-40 168.3 135 66.7
MD04G1070900 Malus domestica HOM05D004437 ORTHO05D005401 1.3e-39 166.8 157 61.8
BcaC01g05120 Brassica carinata HOM05D004437 ORTHO05D005401 1.6e-39 166.4 103 76.7
BcaC02g12196 Brassica carinata HOM05D004437 ORTHO05D005401 1.6e-39 166.4 103 76.7
FvH4_5g01190 Fragaria vesca HOM05D004437 ORTHO05D005401 1.6e-39 166.4 147 61.2
MD02G1197700 Malus domestica HOM05D004437 ORTHO05D005401 2.2e-39 166.0 139 67.6
Potri.003G119300 Populus trichocarpa HOM05D004437 ORTHO05D005401 2.2e-39 166.0 125 70.4
Prupe.5G087000 Prunus persica HOM05D004437 ORTHO05D005401 2.8e-39 165.6 150 61.3
FAN08G0331 Fragaria x ananassa HOM05D004437 ORTHO05D005401 3.7e-39 165.2 147 61.2
FAN10G0783 Fragaria x ananassa HOM05D004437 ORTHO05D005401 3.7e-39 165.2 140 64.3
Hund14703 Selenicereus undatus HOM05D004437 ORTHO05D005401 3.7e-39 165.2 127 70.1
COL.COLO4_23799 Corchorus olitorius HOM05D004437 ORTHO05D005401 4.8e-39 164.9 157 60.5
Zm00001eb208420 Zea mays HOM05D004437 ORTHO05D005401 4.8e-39 164.9 149 63.1
FAN13G0465 Fragaria x ananassa HOM05D004437 ORTHO05D005401 8.2e-39 164.1 157 59.2
AUR62017329 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.1e-38 163.7 145 65.5
FvH4_7g12660 Fragaria vesca HOM05D004437 ORTHO05D005401 1.1e-38 163.7 141 65.2
FAN10G4017 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.1e-38 163.7 141 65.2
Ca_23785_v3 Cicer arietinum L. HOM05D004437 ORTHO05D005401 1.8e-38 162.9 150 61.3
PSO478G3285 Papaver somniferum HOM05D004437 ORTHO05D005401 1.8e-38 162.9 108 76.9
PSO782G1895 Papaver somniferum HOM05D004437 ORTHO05D005401 3.1e-38 162.2 108 76.9
Prupe.2G150900 Prunus persica HOM05D004437 ORTHO05D005401 4.1e-38 161.8 154 60.4
Hund16975 Selenicereus undatus HOM05D004437 ORTHO05D005401 5.3e-38 161.4 146 63.7
AUR62010560 Chenopodium quinoa HOM05D004437 ORTHO05D005401 9.0e-38 160.6 105 75.2
Pp3c14_24540 Physcomitrium patens HOM05D004437 ORTHO05D005401 1.5e-37 159.8 150 61.3
Medtr8g033340 Medicago truncatula HOM05D004437 ORTHO05D005401 2.6e-37 159.1 147 62.6
Psat4g150640 Pisum sativum HOM05D004437 ORTHO05D005401 2.6e-37 159.1 147 61.9
Potri.002G151500 Populus trichocarpa HOM05D004437 ORTHO05D005401 2.6e-37 159.1 150 63.3
FAN18G0922 Fragaria x ananassa HOM05D004437 ORTHO05D005401 5.9e-37 157.9 189 48.7
Lj9A574G30 Lonicera japonica HOM05D000186 ORTHO05D001124 7.7e-37 157.5 107 72.9
AagrBONN_evm.TU.Sc2ySwM_228.779 Anthoceros agrestis HOM05D004437 ORTHO05D005401 1.0e-36 157.1 137 62.8
Sabra03G0083300 Salix brachista HOM05D004437 ORTHO05D005401 1.3e-36 156.8 105 77.1
ClCG05G001990 Citrullus lanatus HOM05D004437 ORTHO05D005401 1.7e-36 156.4 161 58.4
Mapoly0086s0082 Marchantia polymorpha HOM05D004437 ORTHO05D005401 1.7e-36 156.4 151 58.9
CBR_g4404 Chara braunii HOM05D004437 ORTHO05D005401 2.2e-36 156.0 105 75.2
arahy.Tifrunner.gnm1.ann1.9F5S9Q Arachis hypogaea HOM05D004437 ORTHO05D005401 2.9e-36 155.6 156 58.3
SMO230G0007 Selaginella moellendorffii HOM05D004437 ORTHO05D005401 3.8e-36 155.2 143 62.2
MD00G1131900 Malus domestica HOM05D004437 ORTHO05D005401 5.0e-36 154.8 106 72.6
arahy.Tifrunner.gnm1.ann1.7T3GCC Arachis hypogaea HOM05D004437 ORTHO05D005401 1.9e-35 152.9 156 57.7
Potri.014G074000 Populus trichocarpa HOM05D004437 ORTHO05D005401 1.9e-35 152.9 136 61.0
Cpa.g.sc18.165 Carica papaya HOM05D004437 ORTHO05D005401 6.7e-33 144.4 120 68.3
AUR62004271 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.3e-31 140.2 145 58.6
HPP92_025880 Vanilla planifolia HOM05D004437 ORTHO05D005401 2.2e-31 139.4 102 71.6
AUR62033386 Chenopodium quinoa HOM05D004437 ORTHO05D005401 6.3e-31 137.9 181 50.3
Aa31LG1G27110 Aethionema arabicum HOM05D004437 ORTHO05D005401 1.1e-30 137.1 126 63.5
AagrBONN_evm.TU.Sc2ySwM_362.2206 Anthoceros agrestis HOM05D004437 ORTHO05D005401 1.8e-30 136.3 145 56.6
EL10Ac1g00948 Beta vulgaris HOM05D004437 ORTHO05D005401 9.1e-30 134.0 136 57.4
Oeu058600.1 Olea europaea HOM05D004437 ORTHO05D005401 2.0e-29 132.9 75 89.3
EL10Ac5g12685 Beta vulgaris HOM05D004437 ORTHO05D005401 7.2e-27 124.4 138 52.2
Sed0003115 Sechium edule HOM05D004437 ORTHO05D005401 2.1e-26 122.9 111 62.2
FAN01G2781 Fragaria x ananassa HOM05D004437 ORTHO05D005401 3.6e-26 122.1 141 54.6
FAN06G0648 Fragaria x ananassa HOM05D004437 ORTHO05D005401 3.6e-26 122.1 141 54.6
FAN06G3102 Fragaria x ananassa HOM05D004437 ORTHO05D005401 7.9e-26 120.9 141 53.2
Sabra01G0086400 Salix brachista HOM05D004437 ORTHO05D005401 3.9e-25 118.6 146 55.5
Cre09.g404400 Chlamydomonas reinhardtii HOM05D004437 ORTHO05D005401 8.8e-25 117.5 126 52.4
SHI32178 Sapria himalayana HOM05D004437 ORTHO05D005401 2.6e-24 115.9 139 54.0
CDE04G2772 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 5.7e-24 114.8 76 80.3
TPR.G14692 Trifolium pratense HOM05D004437 ORTHO05D005401 1.7e-23 113.2 116 56.0
CAN.G126.10 Capsicum annuum HOM05D004437 ORTHO05D005401 1.5e-21 106.7 97 63.9
C03p30120 Brassica napus HOM05D004437 ORTHO05D005401 7.7e-21 104.4 76 67.1
Glyma.07G081500 Glycine max HOM05D004437 ORTHO05D005401 7.7e-21 104.4 57 86.0
BraA03t11727Z Brassica rapa HOM05D004437 ORTHO05D005401 2.2e-20 102.8 76 65.8
BolC3t15361H Brassica oleracea HOM05D004437 ORTHO05D005401 6.5e-20 101.3 76 65.8
Glyma.20G186451 Glycine max HOM05D004437 ORTHO05D005401 8.0e-18 94.4 59 79.7
Actinidia31448 Actinidia chinensis HOM05D004437 ORTHO05D005401 7.4e-16 87.8 110 56.4
Haze_16715 Corylus avellana HOM05D004437 ORTHO05D005401 3.7e-15 85.5 77 64.9
Haze_26096 Corylus avellana HOM05D004437 ORTHO05D005401 9.1e-14 80.9 118 40.7
A03p25260 Brassica napus HOM05D004437 ORTHO05D005401 5.9e-13 78.2 47 76.6
Zm00001eb230390 Zea mays HOM05D004437 ORTHO05D004372 1.9e-11 73.2 62 59.7
DCAR_008576 Daucus carota HOM05D004437 ORTHO05D005401 4.2e-11 72.0 131 42.0
Atru.ctg1434.8 Acer truncatum HOM05D004437 ORTHO05D037942 3.3e-08 62.4 114 35.1
BcaC09g48983 Brassica carinata HOM05D004437 ORTHO05D005401 5.7e-08 61.6 40 70.0


User provided reference genes

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