Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001672g0160 Nicotiana tabacum HOM05D000888 ORTHO05D000740 9.3e-34 146.7 70 100.0
Nitab4.5_0006661g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.2e-28 129.8 70 85.7
Nitab4.5_0008877g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.5e-23 112.8 70 74.3
Peaxi162Scf00346g00005 Petunia axillaris HOM05D000888 ORTHO05D000740 2.2e-22 109.0 68 72.1
Peaxi162Scf00192g01213 Petunia axillaris HOM05D000888 ORTHO05D000740 1.4e-21 106.3 68 69.1
Sopen08g002440 Solanum pennellii HOM05D000888 ORTHO05D000740 1.4e-21 106.3 69 71.0
Nitab4.5_0000555g0070 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.1e-21 105.1 69 71.0
Peaxi162Scf00045g01527 Petunia axillaris HOM05D000888 ORTHO05D000740 3.1e-21 105.1 69 69.6
Nitab4.5_0012696g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.1e-21 104.8 69 69.6
Nitab4.5_0000555g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 9.1e-21 103.6 69 69.6
Nitab4.5_0013923g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 9.1e-21 103.6 70 71.4
Nitab4.5_0008877g0050 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.5e-20 102.8 69 71.0
PGSC0003DMG400026314 Solanum tuberosum HOM05D000888 ORTHO05D000740 1.5e-20 102.8 67 71.6
CAN.G1632.18 Capsicum annuum HOM05D000888 ORTHO05D000740 2.6e-20 102.1 69 65.2
CAN.G241.28 Capsicum annuum HOM05D000888 ORTHO05D000740 3.4e-20 101.7 69 65.2
Nitab4.5_0007342g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 5.9e-20 100.9 69 69.6
Nitab4.5_0003259g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 7.7e-20 100.5 69 68.1
Nitab4.5_0012696g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.7e-19 99.4 69 69.6
Sopen08g002180 Solanum pennellii HOM05D000888 ORTHO05D000740 2.2e-19 99.0 68 66.2
Nitab4.5_0008877g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.9e-19 98.6 68 64.7
Peaxi162Scf00192g01414 Petunia axillaris HOM05D000888 ORTHO05D000740 2.9e-19 98.6 68 61.8
Peaxi162Scf00045g01644 Petunia axillaris HOM05D000180 ORTHO05D000740 3.8e-19 98.2 67 61.2
Nitab4.5_0000025g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 6.5e-19 97.4 68 66.2
CAN.G137.44 Capsicum annuum HOM05D000888 ORTHO05D000740 8.5e-19 97.1 68 64.7
CAN.G673.5 Capsicum annuum HOM05D000888 ORTHO05D000740 1.1e-18 96.7 69 65.2
Nitab4.5_0010282g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.4e-18 96.3 68 66.2
Sopen08g002240 Solanum pennellii HOM05D000888 ORTHO05D000740 1.4e-18 96.3 70 65.7
CAN.G1342.9 Capsicum annuum HOM05D000888 ORTHO05D000740 2.5e-18 95.5 69 66.7
Nitab4.5_0000555g0110 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.5e-18 95.5 68 66.2
PGSC0003DMG400013589 Solanum tuberosum HOM05D000888 ORTHO05D000740 2.5e-18 95.5 69 66.7
Solyc08g006190.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 4.2e-18 94.7 68 63.2
Sopen08g002170 Solanum pennellii HOM05D000888 ORTHO05D000740 5.5e-18 94.4 70 62.9
PGSC0003DMG400043722 Solanum tuberosum HOM05D000888 ORTHO05D000740 5.5e-18 94.4 68 69.1
CAN.G220.24 Capsicum annuum HOM05D000888 ORTHO05D000740 7.2e-18 94.0 68 66.2
PGSC0003DMG401009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 9.4e-18 93.6 70 61.4
CAN.G757.1 Capsicum annuum HOM05D000888 ORTHO05D000740 1.2e-17 93.2 69 62.3
CAN.G757.9 Capsicum annuum HOM05D000888 ORTHO05D000740 1.2e-17 93.2 69 63.8
CAN.G950.1 Capsicum annuum HOM05D000888 ORTHO05D000740 1.6e-17 92.8 66 68.2
CAN.G137.56 Capsicum annuum HOM05D000888 ORTHO05D000740 2.1e-17 92.4 68 64.7
CAN.G546.36 Capsicum annuum HOM05D000888 ORTHO05D000740 1.4e-16 89.7 68 54.4
CAN.G1238.29 Capsicum annuum HOM05D000888 ORTHO05D000740 1.8e-16 89.4 69 60.9
Dinv00373 Davidia involucrata HOM05D000888 ORTHO05D000740 1.8e-16 89.4 68 58.8
Dinv01509 Davidia involucrata HOM05D000888 ORTHO05D000740 1.8e-16 89.4 68 58.8
Nitab4.5_0010282g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.3e-16 89.0 78 57.7
Cc08_g08270 Coffea canephora HOM05D000888 ORTHO05D000740 3.0e-16 88.6 65 58.5
Peaxi162Scf00326g00321 Petunia axillaris HOM05D000888 ORTHO05D000740 3.0e-16 88.6 104 46.2
Sopen08g002250 Solanum pennellii HOM05D000888 ORTHO05D000740 3.0e-16 88.6 69 58.0
Sopen08g002190 Solanum pennellii HOM05D000888 ORTHO05D000740 3.9e-16 88.2 69 62.3
Sopen02g008810 Solanum pennellii HOM05D000888 ORTHO05D000740 5.1e-16 87.8 68 66.2
Nitab4.5_0008877g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.1e-15 86.7 78 53.8
Sopen08g002220 Solanum pennellii HOM05D000888 ORTHO05D000740 1.1e-15 86.7 69 62.3
Peaxi162Scf00620g00013 Petunia axillaris HOM05D000888 ORTHO05D000740 2.0e-15 85.9 72 56.9
Peaxi162Scf00620g00017 Petunia axillaris HOM05D000888 ORTHO05D000740 2.6e-15 85.5 72 56.9
CAN.G137.58 Capsicum annuum HOM05D000888 ORTHO05D000740 4.4e-15 84.7 70 54.3
CAN.G757.7 Capsicum annuum HOM05D000888 ORTHO05D000740 5.7e-15 84.3 69 58.0
Peaxi162Scf00045g01638 Petunia axillaris HOM05D000888 ORTHO05D000740 9.7e-15 83.6 92 46.7
TWI63G1187 Tripterygium wilfordii HOM05D000888 ORTHO05D000740 2.2e-14 82.4 69 53.6
Nitab4.5_0000555g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.8e-14 82.0 50 74.0
Thecc.09G009500 Theobroma cacao HOM05D000888 ORTHO05D000740 1.1e-13 80.1 64 60.9
CSS0028692 Camellia sinensis var. sinensis HOM05D000888 ORTHO05D000740 1.4e-13 79.7 69 53.6
PGSC0003DMG402018599 Solanum tuberosum HOM05D000421 ORTHO05D000855 1.2e-12 76.6 67 59.7
Cc05_g09340 Coffea canephora HOM05D000888 ORTHO05D000740 2.6e-12 75.5 66 51.5
Peaxi162Scf00045g01642 Petunia axillaris HOM05D000888 ORTHO05D000740 2.6e-12 75.5 50 64.0
Manes.03G005400 Manihot esculenta HOM05D000888 ORTHO05D000740 1.0e-11 73.6 71 50.7
Peaxi162Scf00045g01537 Petunia axillaris HOM05D000888 ORTHO05D000740 2.2e-11 72.4 56 57.1
Solyc08g006210.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 2.2e-11 72.4 46 69.6
Cc08_g06160 Coffea canephora HOM05D000888 ORTHO05D000740 6.5e-11 70.9 66 48.5
Nitab4.5_0000555g0080 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.5e-10 69.7 48 66.7
Cc07_g12880 Coffea canephora HOM05D000888 ORTHO05D000740 2.5e-10 68.9 67 49.3
Gohir.D07G038300 Gossypium hirsutum HOM05D000888 ORTHO05D000740 5.5e-10 67.8 68 54.4
Gohir.A07G034736 Gossypium hirsutum HOM05D000888 ORTHO05D000740 7.2e-10 67.4 68 52.9
Gorai.001G040300 Gossypium raimondii HOM05D000888 ORTHO05D000740 7.2e-10 67.4 68 52.9
Peaxi162Scf00205g00721 Petunia axillaris HOM05D000888 ORTHO05D000740 3.6e-09 65.1 68 48.5
Sopen08g002160 Solanum pennellii HOM05D000888 ORTHO05D000740 3.6e-09 65.1 53 54.7
Thhalv10000130m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 4.7e-09 64.7 70 48.6
AT4G31650 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 1.0e-08 63.5 70 44.3
CAN.G559.1 Capsicum annuum HOM05D000888 ORTHO05D000740 1.0e-08 63.5 48 56.2
BcaNung01507 Brassica carinata HOM05D000888 ORTHO05D000740 1.8e-08 62.8 70 45.7
CAN.G673.6 Capsicum annuum HOM05D000888 ORTHO05D000001 2.3e-08 62.4 63 47.6
Nitab4.5_0000025g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.0e-08 61.6 47 59.6
Sp4g03680 Schrenkiella parvula HOM05D000888 ORTHO05D000740 4.0e-08 61.6 70 48.6
PGSC0003DMG400009538 Solanum tuberosum HOM05D000888 ORTHO05D000740 4.0e-08 61.6 48 62.5
CAN.G757.4 Capsicum annuum HOM05D000888 ORTHO05D000740 5.2e-08 61.2 48 56.2
AT2G24700 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 6.7e-08 60.8 70 47.1
THA.LOC104820202 Tarenaya hassleriana HOM05D000888 ORTHO05D000740 6.7e-08 60.8 74 40.5
AL3G22600 Arabidopsis lyrata HOM05D001505 ORTHO05D000740 8.8e-08 60.5 72 43.1
Carub.0004s0425 Capsella rubella HOM05D000888 ORTHO05D000740 8.8e-08 60.5 63 47.6
AT4G31660 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 1.1e-07 60.1 70 45.7
Solyc08g006200.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.1e-07 60.1 47 55.3
AL4G15420 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.5e-07 59.7 70 47.1
Solyc08g006230.4 Solanum lycopersicum HOM05D000888 ORTHO05D000740 2.0e-07 59.3 49 59.2
Aa31sc15G160 Aethionema arabicum HOM05D000888 ORTHO05D000740 2.6e-07 58.9 70 45.7
Aa31sc15G210 Aethionema arabicum HOM05D000888 ORTHO05D000740 2.6e-07 58.9 70 47.1
AT4G31640 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 2.6e-07 58.9 70 37.1
BcaB04g18619 Brassica carinata HOM05D000888 ORTHO05D000740 3.3e-07 58.5 69 44.9
BcaC02g08431 Brassica carinata HOM05D000888 ORTHO05D000740 3.3e-07 58.5 64 50.0
BolC4t26980H Brassica oleracea HOM05D000888 ORTHO05D000740 3.3e-07 58.5 70 44.3
BraA05t22332Z Brassica rapa HOM05D000888 ORTHO05D000740 4.4e-07 58.2 70 42.9
CAN.G137.57 Capsicum annuum HOM05D000888 ORTHO05D000740 4.4e-07 58.2 48 54.2
CARHR116900 Cardamine hirsuta HOM05D000888 ORTHO05D000740 4.4e-07 58.2 63 46.0
Solyc08g006240.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 4.4e-07 58.2 48 60.4
THA.LOC104803628 Tarenaya hassleriana HOM05D000888 ORTHO05D000740 4.4e-07 58.2 71 46.5
THA.LOC104819940 Tarenaya hassleriana HOM05D000888 ORTHO05D000740 4.4e-07 58.2 73 39.7
AL7G43620 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 5.7e-07 57.8 70 47.1
Thhalv10009500m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 5.7e-07 57.8 71 42.3
BcaNung05175 Brassica carinata HOM05D000888 ORTHO05D000740 7.5e-07 57.4 70 41.4
CARHR239520 Cardamine hirsuta HOM05D000888 ORTHO05D000740 7.5e-07 57.4 70 41.4
AT4G00260 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 9.7e-07 57.0 64 46.9
Carub.0007s0885 Capsella rubella HOM05D000888 ORTHO05D000740 9.7e-07 57.0 71 42.3
CAN.G673.7 Capsicum annuum HOM05D000002 ORTHO05D000740 9.7e-07 57.0 49 53.1
AL4G15540 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.3e-06 56.6 67 44.8
AL4G15670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.3e-06 56.6 67 44.8
A09p56140 Brassica napus HOM05D000888 ORTHO05D000740 1.3e-06 56.6 74 44.6
C08p39100 Brassica napus HOM05D000888 ORTHO05D000740 1.3e-06 56.6 70 45.7
BolC8t51482H Brassica oleracea HOM05D000888 ORTHO05D000740 1.3e-06 56.6 70 45.7
BraA09t41009Z Brassica rapa HOM05D000888 ORTHO05D000740 1.3e-06 56.6 74 44.6
Nitab4.5_0003259g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.3e-06 56.6 47 59.6
Hund12416 Selenicereus undatus HOM05D000888 ORTHO05D000740 1.3e-06 56.6 75 40.0
Aa31LG9G5580 Aethionema arabicum HOM05D000888 ORTHO05D000740 2.2e-06 55.8 64 46.9
Aa31sc15G110 Aethionema arabicum HOM05D000888 ORTHO05D000740 2.2e-06 55.8 64 46.9
Aa31sc15G130 Aethionema arabicum HOM05D000888 ORTHO05D000740 2.2e-06 55.8 64 46.9
Carub.0004s0405 Capsella rubella HOM05D000888 ORTHO05D000740 2.2e-06 55.8 65 43.1
Carub.0007s0893 Capsella rubella HOM05D000888 ORTHO05D000740 2.2e-06 55.8 70 38.6
CAN.G32.2 Capsicum annuum HOM05D000888 ORTHO05D000740 2.2e-06 55.8 75 37.3
AL1G39030 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 2.8e-06 55.5 71 40.8
AL4G15320 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 2.8e-06 55.5 64 45.3
Carub.0003s1035 Capsella rubella HOM05D000888 ORTHO05D000740 2.8e-06 55.5 72 40.3
Carub.0004s0418 Capsella rubella HOM05D000888 ORTHO05D000740 2.8e-06 55.5 72 43.1
AL22U10010 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 4.8e-06 54.7 71 39.4
AL7G51970 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 4.8e-06 54.7 71 39.4
AL7G51980 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 4.8e-06 54.7 71 39.4
AT2G24645 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 4.8e-06 54.7 64 45.3
BcaB01g01400 Brassica carinata HOM05D000888 ORTHO05D000740 4.8e-06 54.7 74 37.8
BcaB05g24132 Brassica carinata HOM05D000888 ORTHO05D000740 4.8e-06 54.7 70 38.6
BcaC09g51951 Brassica carinata HOM05D000888 ORTHO05D000740 4.8e-06 54.7 70 40.0
Carub.0004s0431 Capsella rubella HOM05D000888 ORTHO05D000740 4.8e-06 54.7 64 46.9
AT4G31680 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 6.3e-06 54.3 72 38.9
AT4G31690 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 6.3e-06 54.3 71 33.8
BcaC06g35128 Brassica carinata HOM05D000888 ORTHO05D000740 6.3e-06 54.3 71 38.0
C03p70000 Brassica napus HOM05D000888 ORTHO05D000740 6.3e-06 54.3 73 39.7
Carub.0007s3053 Capsella rubella HOM05D000888 ORTHO05D000740 6.3e-06 54.3 70 44.3
AL4G19670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 8.2e-06 53.9 64 43.8
C07p19500 Brassica napus HOM05D000888 ORTHO05D000740 8.2e-06 53.9 71 38.0
BolC7t42468H Brassica oleracea HOM05D000888 ORTHO05D000740 8.2e-06 53.9 71 38.0


User provided reference genes

Program Settings