Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001669g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 7.2e-143 512.3 250 100.0
Nitab4.5_0000151g0190 Nicotiana tabacum HOM05D006287 ORTHO05D008192 1.0e-112 412.1 215 93.0
PGSC0003DMG400023145 Solanum tuberosum HOM05D006287 ORTHO05D008192 1.8e-93 348.2 250 71.6
Solyc08g067060.2 Solanum lycopersicum HOM05D006287 ORTHO05D008192 2.3e-88 331.3 250 68.8
Sopen08g021010 Solanum pennellii HOM05D006287 ORTHO05D008192 6.7e-88 329.7 250 68.8
Peaxi162Scf00341g00062 Petunia axillaris HOM05D006287 ORTHO05D008192 2.5e-79 301.2 216 69.9
CAN.G98.23 Capsicum annuum HOM05D006287 ORTHO05D008192 1.0e-75 289.3 169 84.6
Nitab4.5_0003498g0100 Nicotiana tabacum HOM05D006287 ORTHO05D008192 2.6e-68 264.6 250 58.4
Nitab4.5_0008089g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 3.1e-53 214.5 116 89.7
Hma1.2p1_0007F.1_g005110 Hydrangea macrophylla HOM05D006287 ORTHO05D008192 4.0e-48 197.6 209 46.9
Cc11_g01810 Coffea canephora HOM05D006287 ORTHO05D008192 3.3e-47 194.5 241 46.1
CSS0048694 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 1.1e-42 179.5 262 42.7
CSS0042508 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 7.2e-42 176.8 270 41.1
Oeu008766.1 Olea europaea HOM05D006287 ORTHO05D008192 4.7e-41 174.1 250 39.6
Dinv11617 Davidia involucrata HOM05D006287 ORTHO05D008192 3.1e-37 161.4 230 43.0
Haze_21571 Corylus avellana HOM05D006287 ORTHO05D008192 1.7e-35 155.6 175 46.9
MSTRG.25851 Avicennia marina HOM05D006287 ORTHO05D008192 2.2e-35 155.2 256 39.1
CiPaw.06G059600 Carya illinoinensis HOM05D006287 ORTHO05D008192 2.2e-35 155.2 206 40.8
Actinidia15687 Actinidia chinensis HOM05D006287 ORTHO05D008192 1.5e-34 152.5 215 42.3
Thecc.09G149000 Theobroma cacao HOM05D006287 ORTHO05D008192 5.5e-34 150.6 166 48.2
CAN.G1030.29 Capsicum annuum HOM05D006287 ORTHO05D008192 2.7e-33 148.3 111 73.0
Prupe.6G275900 Prunus persica HOM05D006287 ORTHO05D008192 1.8e-32 145.6 169 48.5
MSTRG.11775 Avicennia marina HOM05D006287 ORTHO05D008192 3.4e-31 141.4 215 36.7
Duzib168G0154 Durio zibethinus HOM05D006287 ORTHO05D008192 2.8e-30 138.3 215 36.3
GSVIVG01035807001 Vitis vinifera HOM05D006287 ORTHO05D008192 4.9e-30 137.5 132 50.0
Oeu032501.2 Olea europaea HOM05D006287 ORTHO05D008192 8.3e-30 136.7 151 44.4
PGR142G2973 Punica granatum HOM05D006287 ORTHO05D008192 1.8e-29 135.6 242 33.5
Gorai.011G097400 Gossypium raimondii HOM05D006287 ORTHO05D008192 1.6e-28 132.5 184 39.7
Cpa.g.sc1.269 Carica papaya HOM05D006287 ORTHO05D008192 7.7e-28 130.2 144 44.4
Duzib150G0458 Durio zibethinus HOM05D006287 ORTHO05D008192 1.0e-27 129.8 155 40.6
Aa31sc33G30 Aethionema arabicum HOM05D006287 ORTHO05D008192 6.6e-27 127.1 160 41.2
VMungo0331G1641 Vigna mungo HOM05D006287 ORTHO05D008192 6.6e-27 127.1 163 40.5
Ciclev10010816m.g Citrus clementina HOM05D006287 ORTHO05D008192 8.6e-27 126.7 165 39.4
QL08p000602 Quercus lobata HOM05D006287 ORTHO05D008192 8.6e-27 126.7 141 44.0
CANSAT11G2472 Cannabis sativa HOM05D006287 ORTHO05D008192 1.1e-26 126.3 143 46.9
Sabra06G0196000 Salix brachista HOM05D001686 ORTHO05D008192 1.5e-26 125.9 168 42.3
A09p47970 Brassica napus HOM05D006287 ORTHO05D008192 2.5e-26 125.2 244 35.7
Potri.006G250700 Populus trichocarpa HOM05D006287 ORTHO05D008192 2.5e-26 125.2 139 46.0
CARHR164980 Cardamine hirsuta HOM05D006287 ORTHO05D008192 3.3e-26 124.8 165 41.2
SGA_v2.0_scaffold22G09931 Striga asiatica HOM05D006287 ORTHO05D008192 7.3e-26 123.6 163 38.7
Psat7g237040 Pisum sativum HOM05D006287 ORTHO05D008192 9.5e-26 123.2 131 42.0
QL05p049822 Quercus lobata HOM05D006287 ORTHO05D008192 9.5e-26 123.2 140 43.6
COL.COLO4_23984 Corchorus olitorius HOM05D006287 ORTHO05D008192 1.6e-25 122.5 145 42.1
Atru.chr7.2375 Acer truncatum HOM05D006287 ORTHO05D008192 2.8e-25 121.7 252 32.9
Nn3g20345 Nelumbo nucifera HOM05D006287 ORTHO05D008192 2.8e-25 121.7 206 37.9
Nn5g27729 Nelumbo nucifera HOM05D006287 ORTHO05D008192 2.8e-25 121.7 173 39.3
DCAR_006447 Daucus carota HOM05D006287 ORTHO05D008192 4.7e-25 120.9 184 39.7
Thhalv10010921m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 8.0e-25 120.2 244 35.2
Lj7C718G17 Lonicera japonica HOM05D006287 ORTHO05D008192 8.0e-25 120.2 187 37.4
BcaB01g00140 Brassica carinata HOM05D006287 ORTHO05D008192 1.0e-24 119.8 244 32.8
AT3G54980 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 1.4e-24 119.4 156 41.0
arahy.Tifrunner.gnm1.ann1.VPFI8Q Arachis hypogaea HOM05D006287 ORTHO05D008192 5.2e-24 117.5 194 35.6
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 5.2e-24 117.5 131 45.0
AL5G36090 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 8.9e-24 116.7 156 40.4
BraA09t40252Z Brassica rapa HOM05D006287 ORTHO05D008192 3.4e-23 114.8 244 34.4
THA.LOC104824237 Tarenaya hassleriana HOM05D006287 ORTHO05D008192 7.5e-23 113.6 170 38.2
Ca_26550_v3 Cicer arietinum L. HOM05D006287 ORTHO05D008192 1.3e-22 112.8 125 42.4
Medtr4g076540 Medicago truncatula HOM05D006287 ORTHO05D008192 2.9e-22 111.7 130 42.3
AT2G39230 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 4.9e-22 110.9 236 33.5
BcaNung04649 Brassica carinata HOM05D006287 ORTHO05D008192 4.9e-22 110.9 242 34.3
C08p30210 Brassica napus HOM05D006287 ORTHO05D008192 4.9e-22 110.9 242 34.3
Eucgr.I01690 Eucalyptus grandis HOM05D006287 ORTHO05D008192 6.4e-22 110.5 131 45.8
Lsat_1_v5_gn_6_22161 Lactuca sativa HOM05D006287 ORTHO05D008192 1.4e-21 109.4 207 33.3
Phvul.009G090400 Phaseolus vulgaris HOM05D006287 ORTHO05D008192 1.4e-21 109.4 132 43.2
RcHm_v2.0_Chr7g0216391 Rosa chinensis HOM05D006287 ORTHO05D008192 1.4e-21 109.4 150 40.0
TWI63G1321 Tripterygium wilfordii HOM05D006287 ORTHO05D008192 1.8e-21 109.0 145 42.1
Lalb_Chr07g0185941 Lupinus albus HOM05D006287 ORTHO05D008192 3.2e-21 108.2 132 41.7
Sp4g21560 Schrenkiella parvula HOM05D006287 ORTHO05D008192 4.1e-21 107.8 194 33.5
SpUn0018_0110 Schrenkiella parvula HOM05D006287 ORTHO05D008192 4.1e-21 107.8 194 33.5
BolC8t50627H Brassica oleracea HOM05D006287 ORTHO05D008192 1.6e-20 105.9 217 35.0
Carub.0005s2160 Capsella rubella HOM05D006287 ORTHO05D008192 1.0e-19 103.2 136 41.2
Glyma.07G068500 Glycine max HOM05D006287 ORTHO05D008192 2.3e-19 102.1 184 34.2
LjContig00081g0002723 Lotus japonicus HOM05D006287 ORTHO05D008192 8.6e-19 100.1 130 36.2
AL4G36540 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 1.1e-18 99.8 131 39.7
Thhalv10017602m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 1.1e-18 99.8 158 34.2
Sc25g0000480 Simmondsia chinensis HOM05D006287 ORTHO05D008192 2.5e-18 98.6 225 29.8
MD04G1151000 Malus domestica HOM05D006287 ORTHO05D008192 9.5e-18 96.7 112 45.5
Sed0018262 Sechium edule HOM05D006287 ORTHO05D008192 3.6e-17 94.7 167 34.1
TPR.G5606 Trifolium pratense HOM05D006287 ORTHO05D008192 3.6e-17 94.7 143 35.7
FvH4_5g25890 Fragaria vesca HOM05D006287 ORTHO05D008192 6.2e-17 94.0 144 36.1
FAN18G3351 Fragaria x ananassa HOM05D006287 ORTHO05D008192 6.2e-17 94.0 144 36.1
THA.LOC104809984 Tarenaya hassleriana HOM05D006287 ORTHO05D008192 6.2e-17 94.0 181 32.0
ClCG02G013330 Citrullus lanatus HOM05D006287 ORTHO05D008192 8.0e-17 93.6 134 35.8
DCAR_006446 Daucus carota HOM05D006287 ORTHO05D008192 2.3e-16 92.0 157 36.3
Carub.0004s2128 Capsella rubella HOM05D006287 ORTHO05D008192 3.1e-16 91.7 130 37.7
CDE03G0083 Ceratophyllum demersum HOM05D006287 ORTHO05D008192 3.1e-16 91.7 169 33.7
MD12G1164900 Malus domestica HOM05D006287 ORTHO05D008192 2.0e-15 89.0 112 42.9
Aqoxy7G02057 Aquilegia oxysepala HOM05D006287 ORTHO05D008192 4.4e-15 87.8 254 29.1
MELO3C020947.2 Cucumis melo HOM05D006287 ORTHO05D008192 5.8e-15 87.4 148 33.8
CsaV3_2G017510 Cucumis sativus L. HOM05D006287 ORTHO05D008192 5.8e-15 87.4 150 34.0
HanXRQChr02g0050751 Helianthus annuus HOM05D006287 ORTHO05D008192 5.8e-15 87.4 173 32.4
ATR0782G042 Amborella trichopoda HOM05D006287 ORTHO05D008192 7.5e-15 87.0 219 29.2
AUR62015978 Chenopodium quinoa HOM05D006287 ORTHO05D008192 7.5e-15 87.0 228 31.1
Sed0001816 Sechium edule HOM05D006287 ORTHO05D008192 9.8e-15 86.7 142 34.5
HPP92_023171 Vanilla planifolia HOM05D006287 ORTHO05D008192 1.3e-14 86.3 179 34.1
MBI08_g04815_MAGBIO Magnolia biondii HOM05D006287 ORTHO05D008192 3.7e-14 84.7 138 38.4
AUR62021186 Chenopodium quinoa HOM05D006287 ORTHO05D008192 1.1e-13 83.2 146 36.3
Hund04746 Selenicereus undatus HOM05D006287 ORTHO05D008192 1.1e-13 83.2 141 32.6
Ah.13g068920 Amaranthus hybridus HOM05D006287 ORTHO05D008192 1.9e-13 82.4 160 35.6
AUR62021185 Chenopodium quinoa HOM05D006287 ORTHO05D008192 2.7e-12 78.6 256 27.0
AUR62015977 Chenopodium quinoa HOM05D006287 ORTHO05D008192 3.9e-11 74.7 241 24.5
RcHm_v2.0_Chr6g0264781 Rosa chinensis HOM05D006287 ORTHO05D008192 1.1e-10 73.2 111 36.0
RcHm_v2.0_Chr4g0410561 Rosa chinensis HOM05D006287 ORTHO05D008192 1.5e-10 72.8 114 40.4
Aa31sc23G60 Aethionema arabicum HOM05D007212 ORTHO05D009094 1.6e-09 69.3 158 30.4
BcaNung04644 Brassica carinata HOM05D006287 ORTHO05D008192 2.8e-09 68.6 176 33.5
ATR0782G035 Amborella trichopoda HOM05D006287 ORTHO05D008192 3.6e-09 68.2 132 30.3
SEGI_12665 Sequoiadendron giganteum HOM05D007455 ORTHO05D009431 6.2e-09 67.4 166 28.9
MBI01_g07128_MAGBIO Magnolia biondii HOM05D006287 ORTHO05D008192 1.2e-07 63.2 107 38.3
HPP92_012737 Vanilla planifolia HOM05D007496 ORTHO05D009479 5.8e-07 60.8 153 29.4
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 1.3e-06 59.7 167 26.3
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 1.7e-06 59.3 155 27.7
MBI04_g09492_MAGBIO Magnolia biondii HOM05D007496 ORTHO05D009479 3.7e-06 58.2 152 27.6
vmacro17185 Vaccinium macrocarpon HOM05D007496 ORTHO05D009479 3.7e-06 58.2 152 27.0
Atru.chr11.1049 Acer truncatum HOM05D007496 ORTHO05D009479 4.9e-06 57.8 159 24.5
Rhsim09G0071100 Rhododendron simsii HOM05D007496 ORTHO05D009479 6.4e-06 57.4 152 27.0


User provided reference genes

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