Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3761 Erigeron canadensis HOM05D004343 ORTHO05D005695 1.9e-59 232.3 111 100.0
Lsat_1_v5_gn_4_161060 Lactuca sativa HOM05D004343 ORTHO05D005695 1.9e-59 232.3 111 100.0
Nitab4.5_0000147g0050 Nicotiana tabacum HOM05D004343 ORTHO05D005695 1.9e-59 232.3 111 100.0
Nitab4.5_0001663g0250 Nicotiana tabacum HOM05D004343 ORTHO05D005695 1.9e-59 232.3 111 100.0
Solyc04g015350.3 Solanum lycopersicum HOM05D004343 ORTHO05D005695 1.9e-59 232.3 111 100.0
Sopen04g007420 Solanum pennellii HOM05D004343 ORTHO05D005695 1.9e-59 232.3 111 100.0
vmacro16235 Vaccinium macrocarpon HOM05D004343 ORTHO05D005695 4.1e-59 231.1 111 99.1
Dinv15280 Davidia involucrata HOM05D004343 ORTHO05D005695 5.4e-59 230.7 111 99.1
Hma1.2p1_0536F.1_g173910 Hydrangea macrophylla HOM05D004343 ORTHO05D005695 5.4e-59 230.7 110 99.1
Cc11_g15270 Coffea canephora HOM05D004343 ORTHO05D005695 7.1e-59 230.3 111 99.1
Aqoxy3G02910 Aquilegia oxysepala HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
CANSAT01G0446 Cannabis sativa HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
CiPaw.06G071000 Carya illinoinensis HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
COL.COLO4_24195 Corchorus olitorius HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
DCAR_018086 Daucus carota HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
Duzib251G0882 Durio zibethinus HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
Duzib268G1271 Durio zibethinus HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
Gohir.A01G161800 Gossypium hirsutum HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
Gohir.D01G149200 Gossypium hirsutum HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
Gorai.002G185300 Gossypium raimondii HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
HanXRQChr14g0446801 Helianthus annuus HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
Sed0015591 Sechium edule HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
TWI36G0660 Tripterygium wilfordii HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
TWI75G1525 Tripterygium wilfordii HOM05D004343 ORTHO05D005695 9.2e-59 229.9 111 99.1
Ciclev10030717m.g Citrus clementina HOM05D004343 ORTHO05D005695 1.2e-58 229.6 111 98.2
Dinv24834 Davidia involucrata HOM05D004343 ORTHO05D005695 1.2e-58 229.6 111 99.1
QL03p059677 Quercus lobata HOM05D004343 ORTHO05D005695 1.2e-58 229.6 110 99.1
FvH4_4g34140 Fragaria vesca HOM05D004343 ORTHO05D005695 1.6e-58 229.2 111 98.2
FAN12G0317 Fragaria x ananassa HOM05D004343 ORTHO05D005695 1.6e-58 229.2 111 98.2
FAN17G1932 Fragaria x ananassa HOM05D004343 ORTHO05D005695 1.6e-58 229.2 111 98.2
MD13G1093900 Malus domestica HOM05D004343 ORTHO05D005695 1.6e-58 229.2 111 98.2
Prupe.1G251400 Prunus persica HOM05D004343 ORTHO05D005695 1.6e-58 229.2 111 98.2
Rhsim12G0115800 Rhododendron simsii HOM05D004343 ORTHO05D005695 1.6e-58 229.2 111 99.1
RcHm_v2.0_Chr4g0443651 Rosa chinensis HOM05D004343 ORTHO05D005695 1.6e-58 229.2 111 98.2
CAN.G1905.4 Capsicum annuum HOM05D004343 ORTHO05D005695 2.1e-58 228.8 111 99.1
ClCG08G018000 Citrullus lanatus HOM05D004343 ORTHO05D005695 2.1e-58 228.8 111 98.2
Nn2g14843 Nelumbo nucifera HOM05D004343 ORTHO05D005695 2.1e-58 228.8 111 98.2
MSTRG.6617 Avicennia marina HOM05D004343 ORTHO05D005695 2.7e-58 228.4 111 99.1
Peaxi162Scf01286g00001 Petunia axillaris HOM05D004343 ORTHO05D005695 2.7e-58 228.4 111 99.1
SalBow8G4047 Salvia bowleyana HOM05D004343 ORTHO05D005695 2.7e-58 228.4 111 99.1
Oeu054064.1 Olea europaea HOM05D004343 ORTHO05D005695 3.5e-58 228.0 111 98.2
Thecc.02G252600 Theobroma cacao HOM05D004343 ORTHO05D005695 3.5e-58 228.0 111 98.2
Ca_03146_v3 Cicer arietinum L. HOM05D004343 ORTHO05D005695 4.6e-58 227.6 111 98.2
Hma1.2p1_0160F.1_g070980 Hydrangea macrophylla HOM05D004343 ORTHO05D005695 4.6e-58 227.6 111 97.3
Medtr5g034120 Medicago truncatula HOM05D004343 ORTHO05D005695 4.6e-58 227.6 111 98.2
THA.LOC104809607 Tarenaya hassleriana HOM05D004343 ORTHO05D005695 4.6e-58 227.6 111 98.2
TPR.G21086 Trifolium pratense HOM05D004343 ORTHO05D005695 4.6e-58 227.6 111 98.2
MELO3C010667.2 Cucumis melo HOM05D004343 ORTHO05D005695 6.0e-58 227.3 111 98.2
TAR622G0032 Trochodendron aralioides HOM05D004343 ORTHO05D005695 6.0e-58 227.3 111 98.2
TAR622G0596 Trochodendron aralioides HOM05D004343 ORTHO05D005695 6.0e-58 227.3 111 98.2
Aa31LG2G9960 Aethionema arabicum HOM05D004343 ORTHO05D005695 7.8e-58 226.9 111 97.3
AL2G16200 Arabidopsis lyrata HOM05D004343 ORTHO05D005695 7.8e-58 226.9 111 97.3
AT1G60490 Arabidopsis thaliana HOM05D004343 ORTHO05D005695 7.8e-58 226.9 111 97.3
Carub.0002s0485 Capsella rubella HOM05D004343 ORTHO05D005695 7.8e-58 226.9 111 97.3
CARHR052540 Cardamine hirsuta HOM05D004343 ORTHO05D005695 7.8e-58 226.9 111 97.3
CsaV3_2G024650 Cucumis sativus L. HOM05D004343 ORTHO05D005695 7.8e-58 226.9 111 97.3
Lj6A807T88 Lonicera japonica HOM05D004343 ORTHO05D005695 1.0e-57 226.5 111 98.2
GSVIVG01013767001 Vitis vinifera HOM05D004343 ORTHO05D005695 1.0e-57 226.5 111 97.3
Potri.012G075100 Populus trichocarpa HOM05D004343 ORTHO05D005695 1.3e-57 226.1 111 96.4
THA.LOC104823649 Tarenaya hassleriana HOM05D004343 ORTHO05D005695 1.3e-57 226.1 111 97.3
MBI16_g27084_MAGBIO Magnolia biondii HOM05D004343 ORTHO05D005695 1.7e-57 225.7 111 96.4
Psat2g104920 Pisum sativum HOM05D004343 ORTHO05D005695 1.7e-57 225.7 111 97.3
Sabra12G0053500 Salix brachista HOM05D004343 ORTHO05D005695 1.7e-57 225.7 111 96.4
Migut.M00070 Erythranthe guttata HOM05D004343 ORTHO05D005695 2.3e-57 225.3 111 98.2
MD16G1095200 Malus domestica HOM05D004343 ORTHO05D005695 2.3e-57 225.3 111 97.3
Atru.chr11.2050 Acer truncatum HOM05D004343 ORTHO05D005695 3.0e-57 224.9 111 96.4
Cpa.g.sc69.63 Carica papaya HOM05D004343 ORTHO05D005695 3.0e-57 224.9 111 96.4
Sc04g0009240 Simmondsia chinensis HOM05D004343 ORTHO05D005695 3.0e-57 224.9 111 97.3
BcaB07g31219 Brassica carinata HOM05D004343 ORTHO05D005695 3.9e-57 224.6 111 96.4
BcaC04g22231 Brassica carinata HOM05D004343 ORTHO05D005695 3.9e-57 224.6 111 96.4
A09p17490 Brassica napus HOM05D004343 ORTHO05D005695 3.9e-57 224.6 111 96.4
C09p21800 Brassica napus HOM05D004343 ORTHO05D005695 3.9e-57 224.6 111 96.4
BolC9t55085H Brassica oleracea HOM05D004343 ORTHO05D005695 3.9e-57 224.6 111 96.4
BraA09t37375Z Brassica rapa HOM05D004343 ORTHO05D005695 3.9e-57 224.6 111 96.4
Thhalv10023282m.g Eutrema salsugineum HOM05D004343 ORTHO05D005695 3.9e-57 224.6 111 96.4
arahy.Tifrunner.gnm1.ann1.NH5LZK Arachis hypogaea HOM05D004343 ORTHO05D005695 6.6e-57 223.8 111 97.3
arahy.Tifrunner.gnm1.ann1.V3QVP0 Arachis hypogaea HOM05D004343 ORTHO05D005695 6.6e-57 223.8 111 97.3
Glyma.04G094500 Glycine max HOM05D004343 ORTHO05D005695 6.6e-57 223.8 111 97.3
Glyma.06G096300 Glycine max HOM05D004343 ORTHO05D005695 6.6e-57 223.8 111 97.3
Lj2g0023088 Lotus japonicus HOM05D004343 ORTHO05D005695 6.6e-57 223.8 111 97.3
Lalb_Chr09g0326321 Lupinus albus HOM05D004343 ORTHO05D005695 6.6e-57 223.8 111 97.3
Phvul.002G070100 Phaseolus vulgaris HOM05D004343 ORTHO05D005695 6.6e-57 223.8 111 97.3
VMungo1215G0144 Vigna mungo HOM05D004343 ORTHO05D005695 6.6e-57 223.8 111 97.3
BcaC06g31812 Brassica carinata HOM05D004343 ORTHO05D005695 8.6e-57 223.4 111 95.5
CDE05G0167 Ceratophyllum demersum HOM05D004343 ORTHO05D005695 8.6e-57 223.4 111 95.5
AUR62005396 Chenopodium quinoa HOM05D004343 ORTHO05D005695 8.6e-57 223.4 111 96.4
AUR62014058 Chenopodium quinoa HOM05D004343 ORTHO05D005695 8.6e-57 223.4 111 96.4
Sp2g04240 Schrenkiella parvula HOM05D004343 ORTHO05D005695 8.6e-57 223.4 111 95.5
Sabra15G0094700 Salix brachista HOM05D004343 ORTHO05D005695 1.1e-56 223.0 111 95.5
Ah.03g132780 Amaranthus hybridus HOM05D004343 ORTHO05D005695 1.5e-56 222.6 111 96.4
Manes.12G027200 Manihot esculenta HOM05D004343 ORTHO05D005695 1.5e-56 222.6 111 96.4
PSO675G7676 Papaver somniferum HOM05D004343 ORTHO05D005695 1.5e-56 222.6 111 96.4
Lalb_Chr05g0216791 Lupinus albus HOM05D004343 ORTHO05D005695 3.3e-56 221.5 111 96.4
EL10Ac6g13693 Beta vulgaris HOM05D004343 ORTHO05D005695 5.6e-56 220.7 111 95.5
ATR0624G072 Amborella trichopoda HOM05D004343 ORTHO05D005695 1.2e-55 219.5 111 93.7
C05p51050 Brassica napus HOM05D004343 ORTHO05D005695 1.6e-55 219.2 109 94.5
HPP92_021388 Vanilla planifolia HOM05D004343 ORTHO05D005695 1.6e-55 219.2 111 95.5
BcaC02g10625 Brassica carinata HOM05D004343 ORTHO05D005695 3.6e-55 218.0 109 93.6
C04p25940 Brassica napus HOM05D004343 ORTHO05D005695 3.6e-55 218.0 109 93.6
Eucgr.H02571 Eucalyptus grandis HOM05D004343 ORTHO05D005695 3.6e-55 218.0 111 92.8
Eucgr.B01666 Eucalyptus grandis HOM05D004343 ORTHO05D005695 8.1e-55 216.9 111 91.9
Eucgr.B01668 Eucalyptus grandis HOM05D004343 ORTHO05D005695 1.1e-54 216.5 111 91.9
Hund25360 Selenicereus undatus HOM05D004343 ORTHO05D005695 1.4e-54 216.1 107 97.2
PGR119G1808 Punica granatum HOM05D004343 ORTHO05D005695 2.4e-54 215.3 111 91.9
Cfa009167 Carpinus fangiana HOM05D004343 ORTHO05D005695 4.0e-54 214.5 118 90.7
Haze_12200 Corylus avellana HOM05D004343 ORTHO05D005695 4.0e-54 214.5 118 90.7
AagrBONN_evm.TU.Sc2ySwM_228.633 Anthoceros agrestis HOM05D004343 ORTHO05D005695 5.2e-54 214.2 111 91.9
Mapoly0003s0185 Marchantia polymorpha HOM05D004343 ORTHO05D005695 1.5e-53 212.6 111 90.1
Pp3c10_8910 Physcomitrium patens HOM05D004343 ORTHO05D005695 3.4e-53 211.5 111 90.1
Oeu022146.1 Olea europaea HOM05D004343 ORTHO05D005695 9.2e-51 203.4 108 90.7
SMO134G0165 Selaginella moellendorffii HOM05D004343 ORTHO05D005695 3.5e-50 201.4 111 83.8
FAN07G1173 Fragaria x ananassa HOM05D004343 ORTHO05D005695 6.0e-50 200.7 115 87.0
Zm00001eb178330 Zea mays HOM05D004343 ORTHO05D005695 7.8e-50 200.3 111 89.2
FAN22G1014 Fragaria x ananassa HOM05D004343 ORTHO05D005695 1.0e-49 199.9 98 98.0
Os05g0180600 Oryza sativa ssp. japonica HOM05D004343 ORTHO05D005695 1.0e-49 199.9 111 88.3
SEGI_28362 Sequoiadendron giganteum HOM05D004343 ORTHO05D005695 1.2e-42 176.4 97 86.6
CSS0036353 Camellia sinensis var. sinensis HOM05D004343 ORTHO05D005695 2.1e-42 175.6 84 100.0
Os08g0307400 Oryza sativa ssp. japonica HOM05D004343 ORTHO05D005695 1.3e-41 172.9 111 76.6
MCO10G171 Micromonas commoda HOM05D004343 ORTHO05D005695 6.6e-41 170.6 111 73.0
Cre01.g035500 Chlamydomonas reinhardtii HOM05D004343 ORTHO05D005695 7.3e-40 167.2 111 69.4
SMO228G0017 Selaginella moellendorffii HOM05D004343 ORTHO05D005695 3.1e-38 161.8 110 71.8
Actinidia15052 Actinidia chinensis HOM05D004343 ORTHO05D005695 4.0e-38 161.4 99 81.8
PRCOL_00000780 Prasinoderma coloniale HOM05D004343 ORTHO05D005695 6.4e-36 154.1 110 65.5
SGA_v2.0_scaffold181G39704 Striga asiatica HOM05D004343 ORTHO05D005695 8.1e-31 137.1 67 97.0
HanXRQChr17g0539451 Helianthus annuus HOM05D004343 ORTHO05D005695 1.4e-30 136.3 65 100.0
Atru.chr13.1904 Acer truncatum HOM05D004343 ORTHO05D005695 6.9e-30 134.0 65 98.5
SHI17532 Sapria himalayana HOM05D004343 ORTHO05D005695 2.0e-29 132.5 65 96.9
Cfa022200 Carpinus fangiana HOM05D004343 ORTHO05D005695 4.0e-22 108.2 111 45.9
CBR_g5616 Chara braunii HOM05D004343 ORTHO05D005695 4.8e-15 84.7 46 82.6
TAR374G0097 Trochodendron aralioides HOM05D000049 ORTHO05D003323 1.6e-10 69.7 64 62.5


User provided reference genes

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