Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001655g0240 Nicotiana tabacum HOM05D004468 ORTHO05D008180 3.3e-149 531.9 320 100.0
Nitab4.5_0001040g0150 Nicotiana tabacum HOM05D004468 ORTHO05D008180 3.6e-140 501.9 317 80.4
Peaxi162Scf00291g00015 Petunia axillaris HOM05D004468 ORTHO05D008180 2.6e-106 389.4 325 66.2
PGSC0003DMG400008295 Solanum tuberosum HOM05D004468 ORTHO05D008180 2.6e-85 319.7 243 72.8
Sopen02g019960 Solanum pennellii HOM05D004468 ORTHO05D008180 3.7e-84 315.8 246 69.9
CAN.G257.6 Capsicum annuum HOM05D004468 ORTHO05D008180 8.2e-84 314.7 244 71.7
Solyc02g070880.1 Solanum lycopersicum HOM05D004468 ORTHO05D008180 1.4e-80 303.9 246 68.7
Dinv33636 Davidia involucrata HOM05D004468 ORTHO05D008180 2.1e-55 220.3 279 47.3
Dinv05249 Davidia involucrata HOM05D004468 ORTHO05D008180 9.8e-53 211.5 244 49.2
vmacro10945 Vaccinium macrocarpon HOM05D004468 ORTHO05D008180 5.6e-48 195.7 274 44.2
Sabra11G0068700 Salix brachista HOM05D004468 ORTHO05D008180 2.8e-47 193.4 307 45.3
Sabra11G0070800 Salix brachista HOM05D004468 ORTHO05D008180 2.8e-47 193.4 307 45.3
Dinv30712 Davidia involucrata HOM05D004468 ORTHO05D008180 8.0e-47 191.8 239 48.1
Actinidia07680 Actinidia chinensis HOM05D004468 ORTHO05D011136 5.2e-46 189.1 274 60.9
Haze_05549 Corylus avellana HOM05D004468 ORTHO05D008180 3.4e-45 186.4 310 41.9
QL05p059278 Quercus lobata HOM05D004468 ORTHO05D008180 2.4e-43 180.3 244 47.5
Potri.011G080000 Populus trichocarpa HOM05D004468 ORTHO05D008180 5.4e-43 179.1 217 47.0
FAN11G2204 Fragaria x ananassa HOM05D004468 ORTHO05D008180 7.0e-43 178.7 278 43.2
Atru.chr10.1342 Acer truncatum HOM05D004468 ORTHO05D008180 2.0e-42 177.2 245 60.4
Cc09_g09510 Coffea canephora HOM05D004468 ORTHO05D008180 3.5e-42 176.4 243 45.7
FAN21G2255 Fragaria x ananassa HOM05D004468 ORTHO05D008180 5.9e-42 175.6 278 43.5
TWI53G1884 Tripterygium wilfordii HOM05D004468 ORTHO05D008180 5.9e-42 175.6 234 51.7
Ciclev10016464m.g Citrus clementina HOM05D004468 ORTHO05D008180 1.0e-41 174.9 241 46.1
RhsimUnG0149400 Rhododendron simsii HOM05D004468 ORTHO05D008180 1.7e-41 174.1 239 49.8
MD05G1288800 Malus domestica HOM05D004468 ORTHO05D008180 1.1e-40 171.4 242 44.2
Manes.15G119000 Manihot esculenta HOM05D004468 ORTHO05D008180 1.1e-40 171.4 239 43.5
FAN16G0098 Fragaria x ananassa HOM05D004468 ORTHO05D008180 1.5e-40 171.0 278 42.8
FAN25G3280 Fragaria x ananassa HOM05D004468 ORTHO05D008180 1.5e-40 171.0 278 42.1
Prupe.4G077100 Prunus persica HOM05D004468 ORTHO05D008180 2.5e-40 170.2 241 44.8
Thecc.06G154000 Theobroma cacao HOM05D004468 ORTHO05D008180 7.3e-40 168.7 241 44.8
MD10G1264900 Malus domestica HOM05D004468 ORTHO05D008180 9.5e-40 168.3 242 44.6
Actinidia39559 Actinidia chinensis HOM05D004468 ORTHO05D008180 8.0e-39 165.2 269 55.4
Gohir.D05G152600 Gossypium hirsutum HOM05D004468 ORTHO05D008180 2.3e-38 163.7 217 47.5
Cfa000973 Carpinus fangiana HOM05D004468 ORTHO05D008180 5.2e-38 162.5 221 50.2
Dinv32278 Davidia involucrata HOM05D004468 ORTHO05D011136 6.8e-38 162.2 198 47.0
Duzib160G0871 Durio zibethinus HOM05D004468 ORTHO05D008180 6.8e-38 162.2 240 45.0
Gohir.A10G039100 Gossypium hirsutum HOM05D004468 ORTHO05D008180 8.9e-38 161.8 241 43.6
Gorai.011G042000 Gossypium raimondii HOM05D004468 ORTHO05D008180 2.0e-37 160.6 241 43.2
Gorai.009G156700 Gossypium raimondii HOM05D004468 ORTHO05D008180 2.6e-37 160.2 217 45.6
Duzib192G0660 Durio zibethinus HOM05D004468 ORTHO05D008180 5.8e-37 159.1 240 44.6
Gohir.A05G150000 Gossypium hirsutum HOM05D004468 ORTHO05D008180 9.8e-37 158.3 239 43.9
Duzib235G1094 Durio zibethinus HOM05D004468 ORTHO05D008180 1.3e-36 157.9 240 45.4
Lj1P1184T76 Lonicera japonica HOM05D004468 ORTHO05D008180 1.7e-36 157.5 217 65.9
CiPaw.09G126600 Carya illinoinensis HOM05D004468 ORTHO05D008180 2.9e-36 156.8 202 46.5
Hma1.2p1_0164F.1_g073090 Hydrangea macrophylla HOM05D004468 ORTHO05D008180 4.9e-36 156.0 243 43.6
COL.COLO4_06070 Corchorus olitorius HOM05D004468 ORTHO05D008180 1.9e-35 154.1 241 41.9
Oeu052384.1 Olea europaea HOM05D004468 ORTHO05D008180 2.4e-35 153.7 242 40.1
Sc17g0005060 Simmondsia chinensis HOM05D004468 ORTHO05D008180 7.0e-35 152.1 244 42.6
RcHm_v2.0_Chr5g0013411 Rosa chinensis HOM05D004468 ORTHO05D008180 1.6e-34 151.0 245 50.2
TAR629G0415 Trochodendron aralioides HOM05D004468 ORTHO05D008180 2.0e-34 150.6 240 50.0
Aqoxy1G01779 Aquilegia oxysepala HOM05D004468 ORTHO05D008180 3.5e-34 149.8 226 41.6
RhsimUnG0174800 Rhododendron simsii HOM05D004468 ORTHO05D008180 2.3e-33 147.1 222 56.3
MSTRG.14764 Avicennia marina HOM05D004468 ORTHO05D008180 1.2e-31 141.4 239 38.5
Manes.17G067600 Manihot esculenta HOM05D004468 ORTHO05D008180 1.2e-31 141.4 240 42.5
SalBow6G4733 Salvia bowleyana HOM05D004468 ORTHO05D008180 1.6e-31 141.0 205 42.0
SalBow7G0317 Salvia bowleyana HOM05D004468 ORTHO05D008180 1.6e-31 141.0 205 42.0
Hund21515 Selenicereus undatus HOM05D004468 ORTHO05D008180 1.6e-31 141.0 312 33.0
MSTRG.13248 Avicennia marina HOM05D004468 ORTHO05D008180 2.1e-31 140.6 244 41.4
FvH4_3g06000 Fragaria vesca HOM05D004468 ORTHO05D008180 2.8e-31 140.2 243 42.0
MD05G1288000 Malus domestica HOM05D004468 ORTHO05D008180 2.8e-31 140.2 212 42.9
CsaV3_6G051560 Cucumis sativus L. HOM05D004468 ORTHO05D008180 6.2e-31 139.0 232 41.8
CANSAT35G0919 Cannabis sativa HOM05D004468 ORTHO05D008180 1.1e-30 138.3 247 57.9
MD05G1288300 Malus domestica HOM05D004468 ORTHO05D008180 5.2e-30 136.0 212 42.5
Migut.H01376 Erythranthe guttata HOM05D004468 ORTHO05D008180 2.6e-29 133.7 240 37.5
THA.LOC104820641 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 7.5e-29 132.1 213 41.8
CiPaw.10G093500 Carya illinoinensis HOM05D004468 ORTHO05D008180 9.9e-29 131.7 239 41.4
VMungo0251G1661 Vigna mungo HOM05D004468 ORTHO05D008180 2.9e-28 130.2 238 46.6
Glyma.05G129400 Glycine max HOM05D004468 ORTHO05D008180 1.1e-27 128.3 238 39.5
Oeu040960.2 Olea europaea HOM05D004468 ORTHO05D008180 3.2e-27 126.7 158 46.8
TPR.G4895 Trifolium pratense HOM05D004468 ORTHO05D008180 4.1e-27 126.3 247 36.8
Phvul.002G194400 Phaseolus vulgaris HOM05D004468 ORTHO05D008180 5.4e-27 125.9 211 40.3
Nn4g26508 Nelumbo nucifera HOM05D004468 ORTHO05D008180 2.1e-26 124.0 158 43.7
Sed0007839 Sechium edule HOM05D004468 ORTHO05D008180 2.1e-26 124.0 223 37.7
Sed0014650 Sechium edule HOM05D004468 ORTHO05D008180 6.0e-26 122.5 243 37.9
Ca_18271_v3 Cicer arietinum L. HOM05D004468 ORTHO05D008180 3.0e-25 120.2 239 35.6
Medtr4g096660 Medicago truncatula HOM05D004468 ORTHO05D008180 2.5e-24 117.1 201 38.8
PSO541G2725 Papaver somniferum HOM05D004468 ORTHO05D008180 3.3e-24 116.7 197 39.1
Glyma.08G084100 Glycine max HOM05D004468 ORTHO05D008180 5.6e-24 115.9 203 41.9
arahy.Tifrunner.gnm1.ann1.2E3FWC Arachis hypogaea HOM05D004468 ORTHO05D008180 3.6e-23 113.2 203 38.9
PSO675G1482 Papaver somniferum HOM05D004468 ORTHO05D008180 6.2e-23 112.5 189 39.2
Psat7g090880 Pisum sativum HOM05D004468 ORTHO05D008180 1.4e-22 111.3 219 33.3
Lalb_Chr13g0291991 Lupinus albus HOM05D004468 ORTHO05D008180 4.0e-22 109.8 200 41.5
Nn3g20652 Nelumbo nucifera HOM05D004468 ORTHO05D008180 5.2e-22 109.4 158 45.6
Thhalv10009888m.g Eutrema salsugineum HOM05D004468 ORTHO05D008180 1.2e-21 108.2 239 37.2
Sp1g25810 Schrenkiella parvula HOM05D004468 ORTHO05D008180 1.5e-21 107.8 240 38.3
Lsat_1_v5_gn_1_96101 Lactuca sativa HOM05D004468 ORTHO05D008180 3.4e-21 106.7 195 47.7
AL1G43790 Arabidopsis lyrata HOM05D004468 ORTHO05D008180 5.8e-21 105.9 242 46.7
Eucgr.D00317 Eucalyptus grandis HOM05D004468 ORTHO05D008180 9.9e-21 105.1 236 51.7
THA.LOC104812665 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 9.9e-21 105.1 194 41.2
BcaB03g13850 Brassica carinata HOM05D004468 ORTHO05D008180 6.4e-20 102.4 238 35.3
Os01g0626900 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 1.1e-19 101.7 218 33.5
Os02g0315600 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 1.1e-19 101.7 198 34.8
A08p24790 Brassica napus HOM05D004468 ORTHO05D008180 1.9e-19 100.9 244 47.1
BraA08t34433Z Brassica rapa HOM05D004468 ORTHO05D008180 1.9e-19 100.9 244 47.1
CDE02G0697 Ceratophyllum demersum HOM05D004468 ORTHO05D008180 4.1e-19 99.8 214 33.6
BcaC01g00145 Brassica carinata HOM05D004468 ORTHO05D008180 7.1e-19 99.0 244 46.7
C03p76270 Brassica napus HOM05D004468 ORTHO05D008180 7.1e-19 99.0 241 45.2
BolC3t19884H Brassica oleracea HOM05D004468 ORTHO05D008180 7.1e-19 99.0 241 45.2
C07p15630 Brassica napus HOM05D004468 ORTHO05D008180 9.2e-19 98.6 288 33.3
Carub.0001s2818 Capsella rubella HOM05D004468 ORTHO05D008180 2.7e-18 97.1 260 47.7
BcaB03g12186 Brassica carinata HOM05D004468 ORTHO05D008180 4.6e-18 96.3 243 48.1
Lj4g0016525 Lotus japonicus HOM05D004468 ORTHO05D008180 4.6e-18 96.3 211 35.1
BcaC06g35475 Brassica carinata HOM05D004468 ORTHO05D008180 1.3e-17 94.7 237 43.0
BolC7t42051H Brassica oleracea HOM05D004468 ORTHO05D008180 1.3e-17 94.7 237 43.0
Zm00001eb384990 Zea mays HOM05D004468 ORTHO05D008180 1.3e-17 94.7 231 39.8
Gohir.D10G039900 Gossypium hirsutum HOM05D004468 ORTHO05D008180 1.7e-17 94.4 241 34.4
Os03g0591300 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 2.3e-17 94.0 200 40.5
HanXRQChr04g0118301 Helianthus annuus HOM05D004468 ORTHO05D008180 3.0e-17 93.6 227 50.2
unitig_8.g4884 Utricularia gibba HOM05D004468 ORTHO05D008180 3.9e-17 93.2 205 33.7
MELO3C007151.2 Cucumis melo HOM05D004468 ORTHO05D008180 5.1e-17 92.8 232 51.7
AT1G29950 Arabidopsis thaliana HOM05D004468 ORTHO05D008180 2.1e-15 87.4 245 49.4
A07p10110 Brassica napus HOM05D004468 ORTHO05D008180 1.4e-14 84.7 232 48.7
CARHR029490 Cardamine hirsuta HOM05D004468 ORTHO05D008180 1.8e-14 84.3 244 45.5
Solyc02g070875.1 Solanum lycopersicum HOM05D004468 ORTHO05D011136 5.2e-14 82.8 45 86.7
QL05p059480 Quercus lobata HOM05D004468 ORTHO05D008180 1.5e-13 81.3 83 53.0
BraA07t28804Z Brassica rapa HOM05D004468 ORTHO05D008180 2.2e-12 77.4 290 28.3
ECA236G0629 Erigeron canadensis HOM05D004468 ORTHO05D011136 2.9e-12 77.0 274 31.8
Lsat_1_v5_gn_7_32861 Lactuca sativa HOM05D004468 ORTHO05D008180 8.4e-12 75.5 186 38.7
BolC7t42047H Brassica oleracea HOM05D004468 ORTHO05D008180 1.1e-11 75.1 112 40.2
Zm00001eb278170 Zea mays HOM05D004468 ORTHO05D008180 4.2e-11 73.2 206 38.3
THA.LOC104814285 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 2.3e-09 67.4 207 30.0
C07p15610 Brassica napus HOM05D004468 ORTHO05D008180 5.1e-09 66.2 186 31.7
MD05G1288500 Malus domestica HOM05D004468 ORTHO05D008180 6.6e-09 65.9 118 39.0
Zm00001eb277350 Zea mays HOM05D004468 ORTHO05D008180 1.6e-07 61.2 184 40.2
Phvul.002G194350 Phaseolus vulgaris HOM05D004468 ORTHO05D011136 1.4e-06 58.2 39 66.7
Thecc.06G154100 Theobroma cacao HOM05D004468 ORTHO05D011136 3.1e-06 57.0 39 66.7
Glyma.08G084200 Glycine max HOM05D004468 ORTHO05D011136 5.3e-06 56.2 39 64.1
Gohir.A10G039000 Gossypium hirsutum HOM05D004468 ORTHO05D011136 5.3e-06 56.2 39 66.7
CiPaw.09G126700 Carya illinoinensis HOM05D004468 ORTHO05D011136 6.9e-06 55.8 39 64.1
Potri.011G080100 Populus trichocarpa HOM05D004468 ORTHO05D011136 6.9e-06 55.8 39 64.1
Gohir.D10G039800 Gossypium hirsutum HOM05D004468 ORTHO05D011136 9.0e-06 55.5 39 66.7
Manes.15G118900 Manihot esculenta HOM05D004468 ORTHO05D011136 9.0e-06 55.5 39 66.7


User provided reference genes

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