Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 0.0e+00 1261.9 627 100.0
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 0.0e+00 1185.6 627 94.7
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 0.0e+00 1115.9 620 90.0
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 0.0e+00 1109.0 613 90.0
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 0.0e+00 1105.5 639 87.8
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 0.0e+00 1079.3 577 92.2
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 4.3e-312 1074.7 577 92.5
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 9.1e-305 1049.7 633 83.7
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.6e-304 1048.9 625 83.5
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 7.3e-294 1013.4 633 80.9
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 2.8e-293 1011.5 638 79.8
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 1.0e-292 1009.6 638 79.6
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 4.0e-292 1007.7 608 81.6
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 5.2e-292 1007.3 632 80.1
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 1.7e-290 1002.3 582 83.5
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 1.7e-290 1002.3 588 83.3
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 6.4e-290 1000.3 623 79.1
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 2.4e-289 998.4 646 77.7
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 7.0e-289 996.9 621 79.2
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 9.2e-289 996.5 617 79.4
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 2.0e-288 995.3 584 82.4
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 2.0e-288 995.3 637 76.8
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 2.0e-288 995.3 589 81.8
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 2.0e-288 995.3 609 79.5
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 2.7e-288 995.0 593 81.3
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 2.7e-288 995.0 633 77.4
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 6.0e-288 993.8 579 82.4
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 6.0e-288 993.8 637 76.6
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 7.8e-288 993.4 636 76.6
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 1.0e-287 993.0 664 76.4
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 2.3e-287 991.9 577 83.2
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 3.0e-287 991.5 643 76.5
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 5.0e-287 990.7 545 87.3
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 5.0e-287 990.7 622 78.6
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 6.6e-287 990.3 580 82.8
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 6.6e-287 990.3 594 81.5
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 6.6e-287 990.3 672 75.3
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 8.6e-287 989.9 642 76.3
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 8.6e-287 989.9 576 81.9
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 1.1e-286 989.6 645 76.6
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 1.5e-286 989.2 581 81.9
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 1.9e-286 988.8 645 76.3
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 1.9e-286 988.8 604 79.6
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 4.3e-286 987.6 636 77.7
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 2.1e-285 985.3 630 76.3
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 2.1e-285 985.3 603 80.1
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 4.7e-285 984.2 640 76.9
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 1.1e-284 983.0 583 80.8
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.4e-284 982.6 640 76.2
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 1.8e-284 982.2 639 75.9
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 4.0e-284 981.1 645 76.0
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 5.2e-284 980.7 645 75.8
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 1.5e-283 979.2 626 78.4
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 2.0e-283 978.8 640 76.7
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 6.4e-282 973.8 628 76.1
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 8.3e-282 973.4 585 80.9
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 2.4e-281 971.8 650 75.7
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 2.4e-281 971.8 577 80.8
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 2.4e-281 971.8 577 81.8
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 9.2e-281 969.9 658 73.9
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 9.2e-281 969.9 581 80.9
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 1.6e-280 969.1 577 81.1
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 1.6e-280 969.1 614 77.7
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 2.7e-280 968.4 631 75.9
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 4.6e-280 967.6 625 76.6
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 6.0e-280 967.2 563 82.2
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 6.0e-280 967.2 622 76.7
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 1.7e-279 965.7 645 75.3
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 3.0e-279 964.9 567 81.1
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 8.6e-279 963.4 583 79.4
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 8.6e-279 963.4 623 75.8
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 1.9e-278 962.2 625 75.5
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 4.3e-278 961.1 624 75.0
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 9.5e-278 959.9 583 79.4
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 1.2e-277 959.5 618 76.4
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 2.8e-277 958.4 638 74.0
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 1.1e-276 956.4 583 79.1
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 1.8e-276 955.7 583 78.4
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 1.8e-276 955.7 627 76.2
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 2.3e-276 955.3 619 75.3
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 3.1e-276 954.9 631 75.8
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 4.0e-276 954.5 580 78.6
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 5.2e-276 954.1 584 78.1
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 8.9e-276 953.4 581 79.2
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 1.2e-275 953.0 649 73.2
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 1.5e-275 952.6 628 75.0
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 1.5e-275 952.6 639 74.0
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 2.0e-275 952.2 649 73.2
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 2.6e-275 951.8 619 75.0
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 2.6e-275 951.8 587 78.7
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 3.4e-275 951.4 637 73.9
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 4.4e-275 951.0 639 74.0
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 4.4e-275 951.0 580 78.1
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 5.8e-275 950.7 543 82.9
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 5.8e-275 950.7 580 79.0
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 2.4e-273 945.3 517 87.6
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 3.9e-271 937.9 545 81.1
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 6.6e-271 937.2 574 77.9
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 6.6e-271 937.2 605 77.2
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 3.3e-270 934.9 531 83.4
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 7.3e-270 933.7 744 67.1
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 1.1e-265 919.8 623 72.9
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 2.4e-265 918.7 631 73.2
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 1.6e-264 916.0 621 73.9
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 6.0e-264 914.1 637 72.7
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 2.3e-263 912.1 640 72.3
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 4.2e-257 891.3 583 74.3
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 1.7e-255 885.9 569 75.9
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 2.3e-255 885.6 532 77.8
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 1.8e-252 875.9 627 70.8
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 4.0e-252 874.8 550 76.2
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 1.3e-247 859.8 640 69.8
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 3.0e-247 858.6 579 72.9
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 8.4e-242 840.5 604 72.2
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 1.4e-241 839.7 539 77.0
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 3.0e-231 805.4 447 85.9
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 3.9e-231 805.1 447 86.4
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 1.4e-228 796.6 584 66.1
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 1.3e-226 790.0 537 72.6
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 3.2e-225 785.4 438 84.7
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 7.4e-222 774.2 548 67.7
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 8.2e-221 770.8 547 68.2
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 1.1e-204 717.2 518 68.5
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 3.2e-193 679.1 452 72.8
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 9.4e-193 677.6 494 68.8
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 2.0e-179 633.3 538 58.0
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 1.1e-172 610.9 361 79.8
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 5.4e-164 582.0 344 80.2
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 4.3e-161 572.4 580 55.5
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 4.7e-152 542.3 365 73.7
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 4.0e-143 512.7 548 53.6
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 9.0e-143 511.5 417 64.0
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 2.0e-142 510.4 561 48.8
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 4.6e-139 499.2 278 84.9
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 1.0e-138 498.0 280 83.6
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 6.0e-131 472.2 301 77.1
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 6.1e-115 419.1 574 44.4
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 1.5e-110 404.4 288 68.4
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 5.9e-94 349.4 643 35.9
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 2.3e-90 337.4 263 66.5
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 1.5e-89 334.7 184 82.1
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 4.0e-82 310.1 549 37.0
Glyma.10G296266 Glycine max HOM05D004119 ORTHO05D004797 2.6e-81 307.4 188 75.5
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 6.3e-80 302.8 591 36.2
RcHm_v2.0_Chr5g0079011 Rosa chinensis HOM05D004119 ORTHO05D004797 7.0e-79 299.3 179 81.6
TAR369G0071 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.2e-78 298.5 179 79.3
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 2.1e-75 287.7 167 80.8
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 7.5e-73 279.3 585 33.5
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 1.2e-67 261.9 321 47.7
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 2.3e-66 257.7 610 33.6
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.0e-65 254.6 140 83.6
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 1.2e-62 245.4 197 66.0
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 2.5e-60 237.7 594 30.8
TAR362G0095 Trochodendron aralioides HOM05D004119 ORTHO05D004797 6.2e-51 206.5 117 82.1
MD11G1020000 Malus domestica HOM05D004119 ORTHO05D004797 2.9e-48 197.6 120 83.3
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 1.6e-43 181.8 107 79.4
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 8.1e-43 179.5 98 87.8
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 2.9e-40 171.0 155 57.4
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 5.4e-39 166.8 114 73.7
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.1e-31 142.5 102 72.5
TPR.G14880 Trifolium pratense HOM05D004119 ORTHO05D004797 1.9e-28 131.7 77 76.6
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 7.3e-28 129.8 97 66.0
MBI04_g37845_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 1.6e-27 128.6 65 92.3
Hund21661 Selenicereus undatus HOM05D002401 ORTHO05D007109 3.6e-27 127.5 67 86.6
Lsat_1_v5_gn_4_11801 Lactuca sativa HOM05D004119 ORTHO05D004797 1.8e-26 125.2 137 48.2
RcHm_v2.0_Chr5g0079031 Rosa chinensis HOM05D004119 ORTHO05D004797 2.8e-19 101.3 64 78.1
TAR633G0263 Trochodendron aralioides HOM05D004119 ORTHO05D004797 5.6e-12 77.0 54 70.4
TPR.G25082 Trifolium pratense HOM05D004119 ORTHO05D004797 2.1e-11 75.1 120 41.7
RcHm_v2.0_Chr5g0079041 Rosa chinensis HOM05D004119 ORTHO05D004797 5.3e-10 70.5 61 62.3
BraA01t00507Z Brassica rapa HOM05D004119 ORTHO05D004797 6.5e-08 63.5 72 48.6
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 1.9e-07 62.0 38 68.4
Actinidia39373 Actinidia chinensis HOM05D004119 ORTHO05D004797 4.6e-06 57.4 63 52.4


User provided reference genes

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