Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 2.2e-238 828.6 419 100.0
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.3e-206 723.0 444 85.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.6e-183 646.4 431 79.4
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.0e-182 643.7 432 78.9
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 1.7e-182 642.9 432 78.7
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 4.6e-159 565.1 386 78.2
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 2.5e-157 559.3 418 71.8
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 4.6e-143 511.9 435 63.9
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 1.5e-141 506.9 445 63.4
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 2.5e-141 506.1 433 64.2
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 8.1e-140 501.1 436 63.8
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 4.2e-136 488.8 451 60.8
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 5.4e-136 488.4 415 63.6
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 5.4e-136 488.4 434 61.1
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 2.1e-135 486.5 446 59.2
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 7.8e-135 484.6 433 60.7
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.9e-134 482.3 433 60.5
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 1.1e-133 480.7 433 60.7
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 5.6e-133 478.4 440 60.5
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 9.6e-133 477.6 437 60.6
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.1e-131 474.2 428 59.8
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 3.4e-130 469.2 441 59.4
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 5.8e-130 468.4 441 59.2
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.9e-129 466.1 445 58.7
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 3.8e-129 465.7 440 60.0
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 6.4e-129 464.9 439 59.2
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.9e-128 463.4 422 59.7
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 1.9e-128 463.4 443 58.5
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 2.4e-128 463.0 435 59.3
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 4.2e-128 462.2 426 60.8
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 9.3e-128 461.1 420 59.3
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.2e-127 460.7 445 58.2
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 6.0e-127 458.4 421 59.4
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 7.9e-127 458.0 439 60.1
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 3.9e-126 455.7 422 59.5
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 6.7e-126 454.9 432 58.8
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.9e-125 453.4 418 60.5
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.9e-125 453.4 442 57.5
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 5.6e-125 451.8 436 58.0
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 7.4e-125 451.4 431 58.7
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 1.6e-124 450.3 440 57.5
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 2.1e-124 449.9 432 57.2
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.8e-124 449.5 438 58.0
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 2.8e-124 449.5 436 57.8
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 6.2e-124 448.4 436 57.8
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.4e-123 447.2 440 57.5
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 4.0e-123 445.7 434 57.6
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 6.9e-123 444.9 435 57.7
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 6.9e-123 444.9 427 57.1
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 9.0e-123 444.5 434 58.3
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 3.4e-122 442.6 417 59.2
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 1.9e-120 436.8 419 56.6
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 2.1e-119 433.3 434 55.8
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.7e-119 433.0 436 56.4
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 3.9e-118 429.1 417 57.6
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.9e-117 426.8 425 56.7
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 3.3e-117 426.0 445 53.9
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.3e-117 426.0 417 59.5
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 3.3e-117 426.0 415 58.3
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.6e-117 425.2 363 63.9
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 2.8e-116 422.9 436 54.6
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 1.4e-115 420.6 424 56.4
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 3.1e-115 419.5 437 55.1
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 5.3e-115 418.7 411 57.7
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 5.3e-115 418.7 435 56.3
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 6.9e-115 418.3 401 56.6
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 9.0e-115 417.9 435 54.9
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 3.8e-113 412.5 435 55.6
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 8.4e-113 411.4 439 54.7
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.1e-112 411.0 415 54.0
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 9.3e-112 407.9 423 54.4
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 8.7e-110 401.4 436 53.7
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.9e-109 400.2 338 64.8
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.9e-109 400.2 442 53.2
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 9.7e-109 397.9 378 60.3
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 4.8e-108 395.6 439 52.6
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 9.0e-107 391.3 440 51.8
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.6e-106 389.8 436 53.0
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 3.8e-105 386.0 432 52.1
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.9e-104 383.6 385 57.4
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 7.2e-104 381.7 406 52.5
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 2.1e-103 380.2 454 50.9
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 4.6e-103 379.0 447 49.4
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.8e-102 377.1 416 51.0
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.1e-101 374.4 440 50.9
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.9e-96 357.1 420 48.8
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 8.8e-94 348.2 458 48.3
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 2.0e-93 347.1 377 49.6
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.4e-93 345.1 357 55.7
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.2e-92 341.7 387 53.2
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.1e-91 338.2 364 54.1
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-90 337.4 366 53.8
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 3.2e-88 329.7 382 50.0
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.1e-85 321.2 489 39.7
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-85 318.9 318 56.6
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-83 314.7 318 56.0
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-83 314.7 318 56.0
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-83 314.7 318 56.0
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.1e-83 314.7 348 48.9
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 3.2e-80 303.1 436 41.3
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 6.7e-78 295.4 444 39.2
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 6.5e-73 278.9 309 51.5
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 7.2e-72 275.4 312 51.9
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 6.3e-68 262.3 238 60.1
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 3.6e-63 246.5 298 49.0
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 2.3e-57 227.3 253 52.2
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.9e-56 224.2 213 57.7
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 1.1e-43 181.8 624 27.4
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.3e-33 148.3 178 47.8
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 5.4e-27 126.3 204 39.2
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.6e-26 124.8 79 75.9
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 5.8e-21 106.3 132 45.5
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.0e-17 95.5 145 41.4
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.4e-14 84.3 174 31.6
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.3e-11 72.4 75 57.3
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.3e-11 72.4 75 57.3
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.3e-11 72.4 75 57.3


User provided reference genes

Program Settings