Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001504g0150 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.3e-121 438.3 215 100.0
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-67 259.2 198 72.7
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-62 243.4 192 71.4
Nitab4.5_0002427g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-50 203.4 188 61.7
Nitab4.5_0000231g0450 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.9e-40 168.7 175 56.6
Nitab4.5_0009976g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.4e-39 166.4 207 48.8
Nitab4.5_0009094g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.1e-39 165.6 196 50.5
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-37 159.1 235 45.5
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-36 157.1 202 49.0
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 2.7e-30 136.3 248 37.5
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-29 134.4 248 36.7
Nitab4.5_0001879g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.6e-28 127.9 147 51.7
Nitab4.5_0004225g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.6e-28 127.9 236 41.5
Nitab4.5_0000517g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-25 119.8 121 56.2
Nitab4.5_0000402g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-22 109.0 59 89.8
Nitab4.5_0001659g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.1e-21 105.5 64 78.1
Nitab4.5_0000754g0300 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.6e-21 105.1 59 88.1
Peaxi162Scf00795g00069 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-18 97.8 143 39.2
Nitab4.5_0013103g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.3e-18 95.5 53 88.7
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 5.3e-18 95.5 67 65.7
Nitab4.5_0006526g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-17 94.0 92 58.7
Nitab4.5_0009143g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.8e-17 92.0 175 38.9
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.8e-17 92.0 193 33.7
Nitab4.5_0000230g0260 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-16 90.9 164 37.8
Peaxi162Scf00028g00075 Petunia axillaris HOM05D002261 ORTHO05D002334 1.3e-16 90.9 71 60.6
Nitab4.5_0005917g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.4e-16 88.6 59 78.0
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.9e-15 87.0 135 37.8
Nitab4.5_0000105g0350 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.4e-15 85.5 196 30.6
Peaxi162Scf00007g01337 Petunia axillaris HOM05D002261 ORTHO05D002334 5.4e-15 85.5 60 66.7
CAN.G165.12 Capsicum annuum HOM05D002261 ORTHO05D002334 1.2e-14 84.3 225 29.8
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.2e-14 84.3 194 29.9
Peaxi162Scf00345g00126 Petunia axillaris HOM05D002261 ORTHO05D002334 1.6e-14 84.0 60 65.0
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.7e-14 83.2 245 25.7
Nitab4.5_0006835g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-14 82.4 196 30.6
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.6e-14 82.4 243 25.1
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 1.8e-13 80.5 287 27.5
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 3.9e-13 79.3 244 27.9
Nitab4.5_0002052g0140 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.3e-12 75.9 113 37.2
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 4.3e-12 75.9 204 27.9
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 7.4e-12 75.1 202 27.7
Nitab4.5_0000890g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-11 73.2 61 54.1
Nitab4.5_0009848g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-11 73.2 114 41.2
Nitab4.5_0002569g0120 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-11 72.8 62 54.8
Nitab4.5_0004260g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-11 72.8 59 54.2
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-11 72.8 59 55.9
Nitab4.5_0011225g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-11 72.8 59 55.9
Peaxi162Scf00175g00342 Petunia axillaris HOM05D002261 ORTHO05D002334 4.8e-11 72.4 60 58.3
Nitab4.5_0000230g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.2e-11 72.0 59 55.9
Nitab4.5_0019209g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-10 71.2 59 54.2
Peaxi162Scf00047g00443 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-10 71.2 60 58.3
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.4e-10 70.1 243 25.9
Nitab4.5_0000317g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.0e-10 69.3 42 66.7
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 5.3e-10 68.9 225 24.4
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 5.3e-10 68.9 225 24.4
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 5.3e-10 68.9 225 24.4
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.3e-10 68.9 75 44.0
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-10 68.9 260 26.5
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 6.9e-10 68.6 193 29.5
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 9.0e-10 68.2 186 31.7
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.0e-10 68.2 201 28.4
Nitab4.5_0001879g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-09 67.4 39 84.6
Nitab4.5_0004247g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-09 67.4 75 46.7
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-09 67.4 185 26.5
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-09 67.4 194 27.8
Nitab4.5_0001604g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.5e-09 65.9 59 52.5
CAN.G619.1 Capsicum annuum HOM05D002261 ORTHO05D002334 5.8e-09 65.5 79 41.8
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 5.8e-09 65.5 194 28.4
PGSC0003DMG400001258 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.8e-09 65.5 213 28.2
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 5.8e-09 65.5 222 24.3
Nitab4.5_0009613g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.6e-09 65.1 60 46.7
Peaxi162Scf00206g00046 Petunia axillaris HOM05D002261 ORTHO05D002334 1.3e-08 64.3 53 56.6
Nitab4.5_0002625g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-08 63.9 42 66.7
Nitab4.5_0007866g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-08 63.9 63 44.4
PGSC0003DMG400001679 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.7e-08 63.9 61 49.2
CAN.G280.21 Capsicum annuum HOM05D002261 ORTHO05D002334 2.2e-08 63.5 79 40.5
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 2.2e-08 63.5 231 23.8
Peaxi162Scf00021g02527 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-08 63.5 61 50.8
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-08 63.5 193 28.0
PGSC0003DMG400022355 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.2e-08 63.5 61 49.2
Nitab4.5_0005023g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.9e-08 63.2 61 54.1
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 2.9e-08 63.2 167 27.5
Nitab4.5_0009745g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.8e-08 62.8 115 38.3
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.9e-08 62.4 82 41.5
Sopen06g019020 Solanum pennellii HOM05D002261 ORTHO05D002334 4.9e-08 62.4 212 27.4
PGSC0003DMG401024222 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.9e-08 62.4 60 46.7
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-08 62.4 237 24.5
Nitab4.5_0000113g0330 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.4e-08 62.0 60 45.0
Sopen07g011000 Solanum pennellii HOM05D000004 ORTHO05D002334 6.4e-08 62.0 77 45.5
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.1e-07 61.2 279 25.4
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-07 61.2 195 25.1
CAN.G223.2 Capsicum annuum HOM05D002261 ORTHO05D002334 1.4e-07 60.8 61 45.9
Nitab4.5_0006660g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.4e-07 60.8 63 44.4
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 1.4e-07 60.8 193 27.5
CAN.G15.23 Capsicum annuum HOM05D002261 ORTHO05D002334 3.2e-07 59.7 61 44.3
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.2e-07 59.7 256 25.4
Nitab4.5_0004746g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.2e-07 59.7 60 45.0
PGSC0003DMG400025489 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.2e-07 59.7 59 47.5
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-07 59.7 143 30.1
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.2e-07 59.3 60 46.7
Nitab4.5_0000941g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.1e-07 58.5 60 48.3
CAN.G217.14 Capsicum annuum HOM05D002261 ORTHO05D002334 9.3e-07 58.2 59 47.5
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 9.3e-07 58.2 61 47.5
PGSC0003DMG400009893 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.3e-07 58.2 61 45.9
PGSC0003DMG400017531 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.2e-06 57.8 61 47.5
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 1.6e-06 57.4 61 47.5
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-06 57.4 194 24.7
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-06 57.0 191 24.1
Nitab4.5_0014440g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-06 57.0 76 39.5
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-06 57.0 72 43.1
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 56.6 67 41.8
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 56.6 177 28.8
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 3.5e-06 56.2 240 22.1
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-06 56.2 193 24.9
Nitab4.5_0000616g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-06 55.8 36 66.7
Nitab4.5_0003011g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.0e-06 55.5 61 44.3
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 6.0e-06 55.5 61 44.3
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 6.0e-06 55.5 61 45.9
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 6.0e-06 55.5 61 42.6
Sopen03g011240 Solanum pennellii HOM05D002538 ORTHO05D002334 6.0e-06 55.5 60 45.0
Solyc02g005070.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 7.9e-06 55.1 61 44.3


User provided reference genes

Program Settings