Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001462g0060 Nicotiana tabacum HOM05D003159 ORTHO05D003780 5.6e-26 120.2 60 100.0
Nitab4.5_0007901g0030 Nicotiana tabacum HOM05D003159 ORTHO05D003780 3.3e-18 94.4 53 86.8
Nitab4.5_0001781g0080 Nicotiana tabacum HOM05D003159 ORTHO05D003780 3.6e-17 90.9 52 80.8
Peaxi162Scf00120g00723 Petunia axillaris HOM05D003159 ORTHO05D003780 4.7e-17 90.5 52 80.8
Lj3C918G0 Lonicera japonica HOM05D003159 ORTHO05D003780 8.1e-17 89.7 52 76.9
CAN.G143.64 Capsicum annuum HOM05D003159 ORTHO05D003780 1.4e-16 89.0 51 80.4
Sopen11g002240 Solanum pennellii HOM05D003159 ORTHO05D003780 1.4e-16 89.0 51 80.4
vmacro19526 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 1.8e-16 88.6 53 77.4
Solyc11g006340.2 Solanum lycopersicum HOM05D003159 ORTHO05D003780 3.1e-16 87.8 51 78.4
Gohir.D11G260700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 5.2e-16 87.0 51 76.5
Gorai.007G279300 Gossypium raimondii HOM05D003159 ORTHO05D003780 5.2e-16 87.0 51 76.5
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 6.8e-16 86.7 51 78.4
Rhsim01G0186900 Rhododendron simsii HOM05D003159 ORTHO05D003780 6.8e-16 86.7 52 76.9
PGSC0003DMG400000995 Solanum tuberosum HOM05D003159 ORTHO05D003780 6.8e-16 86.7 51 78.4
vmacro20008 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 6.8e-16 86.7 52 76.9
CSS0035771 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 8.9e-16 86.3 51 76.5
CSS0009274 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.2e-15 85.9 51 76.5
Gohir.A09G017500 Gossypium hirsutum HOM05D003159 ORTHO05D003780 1.5e-15 85.5 51 76.5
Nn1g02653 Nelumbo nucifera HOM05D003159 ORTHO05D003780 1.5e-15 85.5 51 72.5
Rhsim05G0176200 Rhododendron simsii HOM05D003159 ORTHO05D003780 1.5e-15 85.5 52 78.8
Hund02191 Selenicereus undatus HOM05D003159 ORTHO05D003780 1.5e-15 85.5 51 72.5
Cc02_g09140 Coffea canephora HOM05D003159 ORTHO05D003780 2.0e-15 85.1 52 73.1
COL.COLO4_15406 Corchorus olitorius HOM05D003159 ORTHO05D003780 2.0e-15 85.1 52 73.1
Cpa.g.sc162.3 Carica papaya HOM05D003159 ORTHO05D003780 2.6e-15 84.7 52 73.1
Haze_04383 Corylus avellana HOM05D003159 ORTHO05D003780 2.6e-15 84.7 56 67.9
SGA_v2.0_scaffold4G01959 Striga asiatica HOM05D003159 ORTHO05D003780 2.6e-15 84.7 51 72.5
CiPaw.08G119500 Carya illinoinensis HOM05D003159 ORTHO05D003780 3.4e-15 84.3 52 71.2
Gohir.A11G250300 Gossypium hirsutum HOM05D003159 ORTHO05D003780 3.4e-15 84.3 51 74.5
Gohir.D13G031700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 3.4e-15 84.3 51 74.5
Gorai.013G036100 Gossypium raimondii HOM05D003159 ORTHO05D003780 3.4e-15 84.3 51 74.5
Thecc.05G277700 Theobroma cacao HOM05D003159 ORTHO05D003780 3.4e-15 84.3 51 74.5
Actinidia06676 Actinidia chinensis HOM05D003159 ORTHO05D003780 5.8e-15 83.6 51 76.5
Eucgr.J00270 Eucalyptus grandis HOM05D003159 ORTHO05D003780 5.8e-15 83.6 51 72.5
Duzib128G1665 Durio zibethinus HOM05D003159 ORTHO05D003780 7.5e-15 83.2 52 71.2
Sed0018461 Sechium edule HOM05D003159 ORTHO05D003780 7.5e-15 83.2 56 58.9
Haze_20967 Corylus avellana HOM05D003159 ORTHO05D003780 9.8e-15 82.8 52 71.2
QL01p030114 Quercus lobata HOM05D003159 ORTHO05D003780 9.8e-15 82.8 56 64.3
QL07p003261 Quercus lobata HOM05D003159 ORTHO05D003780 9.8e-15 82.8 56 64.3
TWI81G0941 Tripterygium wilfordii HOM05D003159 ORTHO05D003780 9.8e-15 82.8 52 71.2
Migut.F01579 Erythranthe guttata HOM05D003159 ORTHO05D003780 1.3e-14 82.4 51 70.6
Hma1.2p1_0345F.1_g131280 Hydrangea macrophylla HOM05D003159 ORTHO05D003780 1.3e-14 82.4 55 67.3
Nn3g19572 Nelumbo nucifera HOM05D003159 ORTHO05D003780 1.3e-14 82.4 51 72.5
PSO541G5176 Papaver somniferum HOM05D003159 ORTHO05D003780 1.3e-14 82.4 52 71.2
Potri.019G012300 Populus trichocarpa HOM05D003159 ORTHO05D003780 1.3e-14 82.4 52 69.2
Sabra19G0017400 Salix brachista HOM05D003159 ORTHO05D003780 1.3e-14 82.4 52 69.2
Sabra19G0024900 Salix brachista HOM05D003159 ORTHO05D003780 1.3e-14 82.4 52 69.2
Ciclev10027983m.g Citrus clementina HOM05D003159 ORTHO05D003780 1.7e-14 82.0 51 70.6
MD12G1244300 Malus domestica HOM05D003159 ORTHO05D003780 1.7e-14 82.0 52 69.2
SalBow8G0718 Salvia bowleyana HOM05D003159 ORTHO05D003780 1.7e-14 82.0 51 68.6
Glyma.10G163700 Glycine max HOM05D003159 ORTHO05D003780 2.2e-14 81.6 52 67.3
Lalb_Chr21g0311061 Lupinus albus HOM05D003159 ORTHO05D003780 2.2e-14 81.6 57 63.2
PGR031G1742 Punica granatum HOM05D003159 ORTHO05D003780 2.2e-14 81.6 52 69.2
Aqoxy6G02795 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 2.9e-14 81.3 51 68.6
arahy.Tifrunner.gnm1.ann1.N0IL4Q Arachis hypogaea HOM05D003159 ORTHO05D003780 2.9e-14 81.3 52 69.2
THA.LOC104808027 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 2.9e-14 81.3 56 64.3
MSTRG.927 Avicennia marina HOM05D003159 ORTHO05D003780 3.7e-14 80.9 51 66.7
Ca_10033_v3 Cicer arietinum L. HOM05D003159 ORTHO05D003780 3.7e-14 80.9 52 69.2
Lalb_Chr06g0166711 Lupinus albus HOM05D003159 ORTHO05D003780 3.7e-14 80.9 52 69.2
Lalb_Chr06g0166751 Lupinus albus HOM05D003159 ORTHO05D003780 3.7e-14 80.9 52 69.2
Manes.15G108700 Manihot esculenta HOM05D003159 ORTHO05D003780 3.7e-14 80.9 52 69.2
RcHm_v2.0_Chr3g0450361 Rosa chinensis HOM05D003159 ORTHO05D003780 3.7e-14 80.9 51 70.6
Sabra13G0039800 Salix brachista HOM05D003159 ORTHO05D003780 3.7e-14 80.9 52 67.3
CANSAT54G0311 Cannabis sativa HOM05D003159 ORTHO05D003780 4.9e-14 80.5 51 66.7
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 4.9e-14 80.5 51 68.6
FvH4_5g12790 Fragaria vesca HOM05D003159 ORTHO05D003780 4.9e-14 80.5 56 64.3
FAN18G4090 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.9e-14 80.5 56 64.3
MD04G1227600 Malus domestica HOM05D003159 ORTHO05D003780 4.9e-14 80.5 52 69.2
PSO782G2873 Papaver somniferum HOM05D003159 ORTHO05D003780 4.9e-14 80.5 51 70.6
Prupe.6G346800 Prunus persica HOM05D003159 ORTHO05D003780 4.9e-14 80.5 52 69.2
TAR362G0530 Trochodendron aralioides HOM05D003159 ORTHO05D003780 4.9e-14 80.5 50 70.0
arahy.Tifrunner.gnm1.ann1.W48W00 Arachis hypogaea HOM05D003159 ORTHO05D003780 6.4e-14 80.1 52 67.3
FAN08G2202 Fragaria x ananassa HOM05D003159 ORTHO05D003780 6.4e-14 80.1 56 64.3
PSO675G5476 Papaver somniferum HOM05D003159 ORTHO05D003780 6.4e-14 80.1 52 67.3
FAN18G4088 Fragaria x ananassa HOM05D003159 ORTHO05D003780 8.3e-14 79.7 51 70.6
Lj5g0023348 Lotus japonicus HOM05D003159 ORTHO05D003780 8.3e-14 79.7 51 68.6
Medtr1g080500 Medicago truncatula HOM05D003159 ORTHO05D003780 8.3e-14 79.7 51 66.7
Potri.013G043500 Populus trichocarpa HOM05D003159 ORTHO05D003780 8.3e-14 79.7 52 67.3
TPR.G33936 Trifolium pratense HOM05D003159 ORTHO05D003780 8.3e-14 79.7 51 68.6
FAN09G3226 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.1e-13 79.3 56 64.3
FAN12G0237 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.1e-13 79.3 56 64.3
TPR.G10778 Trifolium pratense HOM05D003159 ORTHO05D003780 1.1e-13 79.3 51 66.7
TPR.G26626 Trifolium pratense HOM05D003159 ORTHO05D003780 1.1e-13 79.3 51 70.6
unitig_22.g5684 Utricularia gibba HOM05D003159 ORTHO05D003780 1.1e-13 79.3 51 68.6
Aqoxy4G01990 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 1.4e-13 79.0 51 66.7
Glyma.20G226300 Glycine max HOM05D003159 ORTHO05D003780 1.4e-13 79.0 52 65.4
Lalb_Chr06g0168161 Lupinus albus HOM05D003159 ORTHO05D003780 1.4e-13 79.0 52 67.3
MBI12_g21500_MAGBIO Magnolia biondii HOM05D003159 ORTHO05D003780 1.9e-13 78.6 51 66.7
Phvul.007G188800 Phaseolus vulgaris HOM05D003159 ORTHO05D003780 1.9e-13 78.6 52 65.4
Psat6g145160 Pisum sativum HOM05D003159 ORTHO05D003780 1.9e-13 78.6 51 66.7
Aa31sc70G90 Aethionema arabicum HOM05D003159 ORTHO05D003780 2.4e-13 78.2 52 65.4
CARHR131850 Cardamine hirsuta HOM05D003159 ORTHO05D003780 2.4e-13 78.2 52 65.4
CDE05G1140 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 2.4e-13 78.2 50 66.0
SEGI_17525 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 2.4e-13 78.2 51 70.6
THA.LOC104799866 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 2.4e-13 78.2 52 67.3
GSVIVG01036258001 Vitis vinifera HOM05D003159 ORTHO05D003780 2.4e-13 78.2 51 66.7
AUR62027480 Chenopodium quinoa HOM05D003159 ORTHO05D003780 3.2e-13 77.8 51 66.7
DCAR_001864 Daucus carota HOM05D003159 ORTHO05D003780 3.2e-13 77.8 51 66.7
DCAR_028952 Daucus carota HOM05D003159 ORTHO05D003780 3.2e-13 77.8 51 66.7
AL4G34620 Arabidopsis lyrata HOM05D003159 ORTHO05D003780 4.1e-13 77.4 52 65.4
EL10Ac8g19239 Beta vulgaris HOM05D003159 ORTHO05D003780 4.1e-13 77.4 51 66.7
PSO170G0868 Papaver somniferum HOM05D003159 ORTHO05D003780 4.1e-13 77.4 51 68.6
PSO170G3230 Papaver somniferum HOM05D003159 ORTHO05D003780 4.1e-13 77.4 51 68.6
VMungo0720G2291 Vigna mungo HOM05D003159 ORTHO05D003780 4.1e-13 77.4 52 63.5
ATR0111G007 Amborella trichopoda HOM05D003159 ORTHO05D003780 5.4e-13 77.0 51 62.7
AUR62033998 Chenopodium quinoa HOM05D003159 ORTHO05D003780 7.1e-13 76.6 51 66.7
Thhalv10016367m.g Eutrema salsugineum HOM05D003159 ORTHO05D003780 7.1e-13 76.6 52 63.5
BcaC01g05601 Brassica carinata HOM05D003159 ORTHO05D003780 9.2e-13 76.3 52 63.5
C03p24440 Brassica napus HOM05D003159 ORTHO05D003780 9.2e-13 76.3 52 63.5
BolC3t14843H Brassica oleracea HOM05D003159 ORTHO05D003780 9.2e-13 76.3 52 63.5
ClCG11G008930 Citrullus lanatus HOM05D003159 ORTHO05D003780 9.2e-13 76.3 51 62.7
Sp4g20070 Schrenkiella parvula HOM05D003159 ORTHO05D003780 9.2e-13 76.3 52 63.5
Aa31LG8G11740 Aethionema arabicum HOM05D003159 ORTHO05D003780 1.2e-12 75.9 51 66.7
AT2G37690 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 1.2e-12 75.9 51 64.7
BcaB01g03763 Brassica carinata HOM05D003159 ORTHO05D003780 1.2e-12 75.9 52 63.5
A03p20800 Brassica napus HOM05D003159 ORTHO05D003780 1.2e-12 75.9 52 63.5
A04p28880 Brassica napus HOM05D003159 ORTHO05D003780 1.2e-12 75.9 52 63.5
BraA03t11320Z Brassica rapa HOM05D003159 ORTHO05D003780 1.2e-12 75.9 52 63.5
BraA04t18362Z Brassica rapa HOM05D003159 ORTHO05D003780 1.2e-12 75.9 52 63.5
MELO3C008089.2 Cucumis melo HOM05D003159 ORTHO05D003780 1.2e-12 75.9 51 62.7
CsaV3_2G033180 Cucumis sativus L. HOM05D003159 ORTHO05D003780 1.2e-12 75.9 51 62.7
HPP92_021777 Vanilla planifolia HOM05D003159 ORTHO05D003780 1.2e-12 75.9 50 62.0
HanXRQChr05g0152861 Helianthus annuus HOM05D003159 ORTHO05D003780 2.1e-12 75.1 51 64.7
BcaC02g07498 Brassica carinata HOM05D003159 ORTHO05D003780 2.7e-12 74.7 52 61.5
C04p66140 Brassica napus HOM05D003159 ORTHO05D003780 2.7e-12 74.7 52 61.5
Carub.0004s1964 Capsella rubella HOM05D003159 ORTHO05D003780 3.5e-12 74.3 51 62.7
Ah.09g228380 Amaranthus hybridus HOM05D003159 ORTHO05D003780 4.6e-12 73.9 51 64.7
HanXRQChr04g0112121 Helianthus annuus HOM05D003159 ORTHO05D003780 6.0e-12 73.6 51 62.7
AUR62010228 Chenopodium quinoa HOM05D003159 ORTHO05D003780 7.8e-12 73.2 55 60.0
SMO270G0125 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 7.8e-12 73.2 50 68.0
Sc06g0010270 Simmondsia chinensis HOM05D003159 ORTHO05D003780 7.8e-12 73.2 51 60.8
BcaB06g29020 Brassica carinata HOM05D003159 ORTHO05D003780 1.0e-11 72.8 52 61.5
Os01g0199900 Oryza sativa ssp. japonica HOM05D003159 ORTHO05D003780 1.0e-11 72.8 60 55.0
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 1.0e-11 72.8 56 57.1
SMO358G0312 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 1.7e-11 72.0 50 66.0
BolC4t28117H Brassica oleracea HOM05D003159 ORTHO05D003780 2.3e-11 71.6 51 60.8
Mapoly0046s0034 Marchantia polymorpha HOM05D003159 ORTHO05D003780 5.1e-11 70.5 51 60.8
SHI06091 Sapria himalayana HOM05D003159 ORTHO05D003780 8.6e-11 69.7 51 62.7
AagrBONN_evm.TU.Sc2ySwM_368.1733 Anthoceros agrestis HOM05D003159 ORTHO05D003780 1.1e-10 69.3 51 58.8
Pp3c2_24240 Physcomitrium patens HOM05D003159 ORTHO05D003780 1.5e-10 68.9 50 64.0
CBR_g8948 Chara braunii HOM05D003159 ORTHO05D003780 1.1e-08 62.8 51 58.8
CDE11G0603 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 8.9e-08 59.7 44 56.8
FAN11G2158 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.2e-07 59.3 44 61.4
FAN12G4313 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.2e-07 59.3 44 61.4
CSS0018975 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.3e-06 55.8 51 52.9
CSS0027773 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 2.2e-06 55.1 40 65.0


User provided reference genes

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