Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001444g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.8e-53 211.5 93 100.0
PGSC0003DMG400003817 Solanum tuberosum HOM05D000024 ORTHO05D000006 4.0e-15 84.7 97 41.2
MBI13_g01617_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 4.9e-13 77.8 91 39.6
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.4e-12 74.3 93 38.7
MBI15_g18587_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 7.1e-12 73.9 90 40.0
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.1e-12 73.9 93 40.9
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 7.1e-12 73.9 92 38.0
MBI18_g29477_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 1.2e-11 73.2 87 40.2
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-11 72.8 98 37.8
Nitab4.5_0002977g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.1e-11 72.4 86 44.2
PGSC0003DMG400033353 Solanum tuberosum HOM05D000024 ORTHO05D000006 2.1e-11 72.4 83 41.0
Sopen11g016300 Solanum pennellii HOM05D000024 ORTHO05D000006 2.7e-11 72.0 82 41.5
CAN.G421.3 Capsicum annuum HOM05D000024 ORTHO05D000006 1.0e-10 70.1 86 40.7
Nitab4.5_0002487g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.0e-10 70.1 101 35.6
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-10 70.1 98 35.7
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 1.3e-10 69.7 82 41.5
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 1.3e-10 69.7 96 38.5
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 69.3 95 34.7
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-10 68.9 97 38.1
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 3.0e-10 68.6 90 37.8
Nitab4.5_0004384g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.9e-10 68.2 58 46.6
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 3.9e-10 68.2 57 49.1
Nitab4.5_0002170g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-09 66.6 48 54.2
TAR308G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.1e-09 66.6 86 39.5
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-09 66.2 103 35.9
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.5e-09 66.2 94 37.2
TAR014G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.5e-09 66.2 81 42.0
TAR252G0002 Trochodendron aralioides HOM05D000024 ORTHO05D000006 1.9e-09 65.9 85 38.8
Nitab4.5_0003921g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.5e-09 65.5 93 37.6
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-09 65.5 83 42.2
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.5e-09 65.5 93 35.5
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 2.5e-09 65.5 80 42.5
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 2.5e-09 65.5 96 38.5
TAR710G0001 Trochodendron aralioides HOM05D000024 ORTHO05D000006 2.5e-09 65.5 99 36.4
Nitab4.5_0001783g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.3e-09 65.1 81 40.7
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 5.6e-09 64.3 73 41.1
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 7.3e-09 63.9 49 51.0
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 9.6e-09 63.5 82 40.2
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 9.6e-09 63.5 80 40.0
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-08 62.8 73 37.0
SHI53523 Sapria himalayana HOM05D000003 ORTHO05D000004 2.1e-08 62.4 82 40.2
SHI54645 Sapria himalayana HOM05D000003 ORTHO05D000004 2.1e-08 62.4 82 40.2
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-08 62.4 49 46.9
TAR518G0001 Trochodendron aralioides HOM05D000024 ORTHO05D000006 2.1e-08 62.4 81 39.5
Nitab4.5_0000912g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.8e-08 62.0 43 55.8
Nitab4.5_0002737g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.8e-08 62.0 88 38.6
Nitab4.5_0006567g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.8e-08 62.0 72 43.1
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-08 62.0 46 52.2
Nitab4.5_0000102g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.6e-08 61.6 55 47.3
Nitab4.5_0000355g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.6e-08 61.6 88 39.8
Nitab4.5_0000508g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.6e-08 61.6 80 38.8
MBI03_g03959_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 4.8e-08 61.2 86 36.0
MBI18_g07909_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 4.8e-08 61.2 90 34.4
Thecc.10G099500 Theobroma cacao HOM05D000024 ORTHO05D000006 4.8e-08 61.2 89 38.2
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 6.2e-08 60.8 73 35.6
TAR641G0001 Trochodendron aralioides HOM05D000024 ORTHO05D000006 6.2e-08 60.8 86 37.2
Nitab4.5_0000092g0350 Nicotiana tabacum HOM05D000003 ORTHO05D000006 8.1e-08 60.5 73 41.1
MBI17_g44068_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 1.1e-07 60.1 84 36.9
Nitab4.5_0000697g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-07 60.1 84 38.1
Nitab4.5_0000841g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000022 1.1e-07 60.1 48 45.8
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 1.1e-07 60.1 56 42.9
TAR295G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.1e-07 60.1 91 34.1
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 1.4e-07 59.7 46 50.0
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-07 59.7 73 37.0
CAN.G1535.2 Capsicum annuum HOM05D000024 ORTHO05D000006 1.8e-07 59.3 84 41.7
PGSC0003DMG400038802 Solanum tuberosum HOM05D000024 ORTHO05D000006 1.8e-07 59.3 87 35.6
Aqoxy5G03271 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 2.4e-07 58.9 85 35.3
MBI16_g24668_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 2.4e-07 58.9 89 31.5
Nitab4.5_0006711g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.4e-07 58.9 55 49.1
MBI14_g11584_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 4.0e-07 58.2 94 33.0
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.0e-07 58.2 84 38.1
Nitab4.5_0005100g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.0e-07 58.2 93 33.3
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 4.0e-07 58.2 82 42.7
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 4.0e-07 58.2 49 42.9
Sopen00g005730 Solanum pennellii HOM05D000024 ORTHO05D000006 4.0e-07 58.2 51 51.0
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 4.0e-07 58.2 49 42.9
Sopen11g013960 Solanum pennellii HOM05D000003 ORTHO05D000006 4.0e-07 58.2 49 42.9
Thecc.08G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 4.0e-07 58.2 88 35.2
MBI10_g38924_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 5.3e-07 57.8 84 35.7
MBI15_g04677_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 5.3e-07 57.8 90 35.6
MBI15_g36476_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 5.3e-07 57.8 89 30.3
Nitab4.5_0002108g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.3e-07 57.8 94 36.2
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 5.3e-07 57.8 67 38.8
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 5.3e-07 57.8 44 52.3
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.9e-07 57.4 87 32.2
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.9e-07 57.4 87 32.2
MBI10_g11263_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 9.0e-07 57.0 86 36.0
Nitab4.5_0010487g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.0e-07 57.0 47 46.8
Sopen11g012290 Solanum pennellii HOM05D000003 ORTHO05D000006 9.0e-07 57.0 80 40.0
Thecc.02G366600 Theobroma cacao HOM05D000003 ORTHO05D000006 9.0e-07 57.0 90 34.4
MBI06_g11890_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 56.6 86 36.0
MBI11_g29955_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 1.2e-06 56.6 84 32.1
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-06 56.6 44 50.0
Atru.chr9.814 Acer truncatum HOM05D000003 ORTHO05D000006 1.5e-06 56.2 47 46.8
Aqoxy7G02980 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 1.5e-06 56.2 89 32.6
MBI01_g02769_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 1.5e-06 56.2 77 37.7
MBI14_g26416_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.5e-06 56.2 87 31.0
Nitab4.5_0003961g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.5e-06 56.2 83 33.7
Nitab4.5_0003964g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.5e-06 56.2 47 44.7
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 1.5e-06 56.2 44 52.3
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-06 56.2 37 59.5
Thecc.06G087200 Theobroma cacao HOM05D000024 ORTHO05D000006 1.5e-06 56.2 83 37.3
AUR62015316 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.0e-06 55.8 91 35.2
MBI01_g38230_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.0e-06 55.8 93 32.3
Atru.chr2.1950 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-06 55.5 40 57.5
MBI01_g14105_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 2.6e-06 55.5 87 31.0
MBI01_g21243_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 2.6e-06 55.5 85 34.1
MBI14_g44641_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.6e-06 55.5 93 30.1
MBI19_g23815_MAGBIO Magnolia biondii HOM05D000324 ORTHO05D003243 2.6e-06 55.5 76 38.2
Nitab4.5_0000261g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.6e-06 55.5 89 40.4
Thecc.07G168400 Theobroma cacao HOM05D000024 ORTHO05D000006 2.6e-06 55.5 87 34.5
Thecc.08G202400 Theobroma cacao HOM05D000024 ORTHO05D000006 2.6e-06 55.5 86 37.2
MBI05_g26192_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 3.4e-06 55.1 91 28.6
MBI12_g21992_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 3.4e-06 55.1 87 33.3
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 3.4e-06 55.1 44 47.7
Sopen11g012710 Solanum pennellii HOM05D000014 ORTHO05D000016 3.4e-06 55.1 51 49.0
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 3.4e-06 55.1 83 38.6
MBI18_g34968_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.4e-06 54.7 89 31.5
Nitab4.5_0000357g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.4e-06 54.7 49 42.9
Sopen05g020300 Solanum pennellii HOM05D000003 ORTHO05D000006 4.4e-06 54.7 44 52.3
MBI12_g15056_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 5.8e-06 54.3 96 32.3
MBI14_g46037_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 5.8e-06 54.3 93 29.0
MBI16_g18658_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 5.8e-06 54.3 89 31.5
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 5.8e-06 54.3 44 47.7
Thecc.03G055900 Theobroma cacao HOM05D000024 ORTHO05D000006 7.6e-06 53.9 86 34.9
Nitab4.5_0001955g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.9e-06 53.5 83 34.9
TWI12G0720 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.9e-06 53.5 42 47.6


User provided reference genes

Program Settings