Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 1.7e-88 329.3 164 100.0
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 1.2e-78 296.6 180 87.2
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 1.0e-66 256.9 179 75.4
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 3.0e-66 255.4 179 75.4
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 1.7e-61 239.6 179 75.4
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 2.0e-57 226.1 181 65.7
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 1.3e-56 223.4 140 80.0
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 2.6e-49 199.1 183 63.9
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 3.7e-48 195.3 184 62.5
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 3.7e-48 195.3 184 62.5
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 8.3e-48 194.1 185 62.2
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 7.0e-47 191.0 182 62.1
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 2.0e-46 189.5 189 60.3
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 2.0e-46 189.5 182 62.1
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 3.5e-46 188.7 185 59.5
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 1.3e-45 186.8 182 58.8
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 2.9e-45 185.7 183 60.1
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 2.9e-45 185.7 181 60.2
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 3.8e-45 185.3 179 59.8
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 3.8e-45 185.3 185 60.5
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 3.8e-45 185.3 182 60.4
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 3.8e-45 185.3 182 60.4
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 5.0e-45 184.9 182 61.0
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 5.0e-45 184.9 182 61.0
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 6.6e-45 184.5 185 60.0
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 6.6e-45 184.5 183 61.2
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 6.6e-45 184.5 181 60.8
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 6.6e-45 184.5 181 60.8
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 1.1e-44 183.7 182 59.3
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 1.9e-44 183.0 182 60.4
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 1.9e-44 183.0 182 59.9
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 3.3e-44 182.2 182 59.9
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 4.3e-44 181.8 182 59.9
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 4.3e-44 181.8 185 58.9
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 7.3e-44 181.0 187 61.5
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 9.5e-44 180.6 179 59.2
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 2.1e-43 179.5 171 61.4
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 2.1e-43 179.5 171 61.4
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 3.6e-43 178.7 184 57.1
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 4.7e-43 178.3 179 58.7
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 6.1e-43 177.9 185 59.5
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 8.0e-43 177.6 182 57.7
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 1.4e-42 176.8 191 57.6
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 1.4e-42 176.8 188 58.0
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 1.4e-42 176.8 182 59.3
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 1.4e-42 176.8 183 56.3
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 1.8e-42 176.4 182 57.7
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 2.3e-42 176.0 184 60.3
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 4.0e-42 175.3 188 58.0
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 4.0e-42 175.3 180 59.4
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 5.2e-42 174.9 195 54.9
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 5.2e-42 174.9 186 54.8
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 8.9e-42 174.1 183 56.8
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 8.9e-42 174.1 182 58.2
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 8.9e-42 174.1 183 59.6
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 2.0e-41 172.9 180 58.3
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 2.0e-41 172.9 180 58.3
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 2.0e-41 172.9 185 56.2
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 2.6e-41 172.6 186 60.2
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 3.4e-41 172.2 176 57.4
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 3.4e-41 172.2 176 57.4
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 3.4e-41 172.2 176 57.4
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 3.4e-41 172.2 184 59.2
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 3.4e-41 172.2 184 58.7
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 3.4e-41 172.2 183 58.5
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 5.8e-41 171.4 185 57.3
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 9.8e-41 170.6 182 56.6
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 9.8e-41 170.6 182 57.1
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 1.7e-40 169.9 140 65.0
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 2.9e-40 169.1 177 56.5
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 2.9e-40 169.1 175 57.7
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 2.9e-40 169.1 175 57.7
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 2.9e-40 169.1 184 58.7
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 2.9e-40 169.1 185 55.7
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 3.7e-40 168.7 186 54.8
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 3.7e-40 168.7 192 57.3
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 4.9e-40 168.3 183 58.5
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 4.9e-40 168.3 174 59.2
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 6.4e-40 167.9 176 57.4
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 8.3e-40 167.5 181 55.2
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 8.3e-40 167.5 182 52.7
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 1.1e-39 167.2 188 56.4
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 1.4e-39 166.8 168 58.9
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 1.4e-39 166.8 181 54.7
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 1.8e-39 166.4 190 57.4
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 1.8e-39 166.4 184 56.0
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.8e-39 166.4 129 69.0
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 2.4e-39 166.0 184 57.6
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 2.4e-39 166.0 173 56.1
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 2.4e-39 166.0 187 56.7
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 4.1e-39 165.2 184 54.9
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 5.4e-39 164.9 184 58.2
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 5.4e-39 164.9 184 55.4
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 7.0e-39 164.5 185 57.3
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 1.2e-38 163.7 177 58.8
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 1.2e-38 163.7 184 54.9
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 2.7e-38 162.5 184 58.2
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 2.7e-38 162.5 182 57.7
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 3.5e-38 162.2 185 53.5
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 4.6e-38 161.8 183 56.3
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 4.6e-38 161.8 182 56.6
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 6.0e-38 161.4 186 55.9
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 7.8e-38 161.0 225 46.2
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 2.3e-37 159.5 219 50.7
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 8.6e-37 157.5 178 55.6
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 3.3e-36 155.6 183 56.3
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 7.3e-36 154.5 121 66.9
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 1.6e-35 153.3 185 53.5
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 4.7e-35 151.8 90 84.4
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 8.0e-35 151.0 132 62.9
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 2.3e-34 149.4 292 38.7
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.5e-33 146.7 183 50.3
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 2.0e-33 146.4 86 83.7
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 2.6e-33 146.0 170 52.4
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 3.4e-33 145.6 96 76.0
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 4.4e-33 145.2 113 67.3
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 9.8e-33 144.1 162 55.6
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 9.8e-33 144.1 82 89.0
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 9.8e-33 144.1 194 49.0
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 2.2e-32 142.9 86 80.2
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 2.2e-32 142.9 154 57.8
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 6.4e-32 141.4 82 85.4
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 8.3e-32 141.0 113 64.6
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 7.8e-30 134.4 81 77.8
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 7.8e-30 134.4 82 82.9
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 1.3e-29 133.7 150 56.0
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.7e-29 133.3 167 49.7
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 1.7e-29 133.3 136 57.4
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 1.2e-27 127.1 184 47.3
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 1.8e-26 123.2 86 76.7
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 1.5e-25 120.2 177 45.2
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 2.9e-24 115.9 171 42.1
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 3.3e-20 102.4 122 49.2
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 4.3e-20 102.1 100 51.0
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 4.0e-18 95.5 73 56.2
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 3.4e-17 92.4 100 48.0
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 5.4e-15 85.1 54 74.1
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 3.5e-14 82.4 54 75.9
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 1.4e-10 70.5 63 49.2
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 7.1e-07 58.2 41 73.2


User provided reference genes

Program Settings