Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 8.3e-238 826.6 411 100.0
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 8.6e-203 710.3 391 91.3
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 1.7e-182 642.9 407 79.1
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 4.0e-176 621.7 407 77.4
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.4e-165 586.6 389 76.9
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 1.1e-157 560.5 563 56.0
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 1.1e-154 550.4 411 71.0
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.2e-132 477.2 305 75.7
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 6.3e-113 411.8 257 76.7
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 4.2e-109 399.1 414 52.7
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 6.8e-107 391.7 405 52.6
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 1.2e-106 391.0 430 51.2
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 1.5e-106 390.6 412 50.7
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.6e-103 380.6 337 57.3
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.6e-103 380.6 398 52.3
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 1.0e-102 377.9 395 50.9
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 1.7e-102 377.1 372 54.0
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 1.1e-101 374.4 450 47.8
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 9.5e-101 371.3 406 48.0
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 9.5e-101 371.3 387 52.5
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 1.0e-99 367.9 416 48.8
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 1.8e-99 367.1 398 50.5
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 8.9e-99 364.8 408 50.0
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 9.8e-98 361.3 403 48.4
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 9.8e-98 361.3 407 46.4
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 2.4e-96 356.7 395 47.6
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 9.2e-96 354.8 406 46.6
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 2.7e-95 353.2 407 46.4
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 3.9e-94 349.4 394 48.2
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 8.6e-94 348.2 404 45.8
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.2e-92 344.4 409 47.4
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.8e-92 343.2 409 47.9
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 2.8e-92 343.2 398 46.7
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 1.8e-91 340.5 416 45.9
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 3.1e-91 339.7 408 47.1
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 4.0e-91 339.3 406 44.1
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 1.5e-90 337.4 416 45.9
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.0e-90 337.0 393 46.6
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.4e-90 335.9 393 46.1
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 4.4e-90 335.9 415 45.8
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 9.8e-90 334.7 397 45.8
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 2.2e-89 333.6 395 47.6
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 4.9e-89 332.4 393 46.3
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 6.4e-89 332.0 399 43.4
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 8.3e-89 331.6 405 43.2
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 5.4e-88 328.9 408 46.3
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 1.2e-87 327.8 398 48.0
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 2.1e-87 327.0 397 46.3
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 2.1e-87 327.0 409 45.2
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 2.7e-87 326.6 397 46.3
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 2.7e-87 326.6 399 47.1
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 6.0e-87 325.5 397 46.1
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 7.8e-87 325.1 398 46.7
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 7.8e-87 325.1 395 45.1
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 1.3e-86 324.3 407 44.2
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 2.3e-86 323.6 398 46.7
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.9e-86 322.8 393 45.0
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 5.1e-86 322.4 399 45.9
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 8.6e-86 321.6 398 46.2
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 1.5e-85 320.9 444 40.8
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.9e-85 320.5 393 44.5
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 2.5e-85 320.1 399 45.4
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 7.3e-85 318.5 463 40.2
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 7.3e-85 318.5 409 44.7
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 2.1e-84 317.0 403 44.9
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 2.8e-84 316.6 352 48.9
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 6.2e-84 315.5 340 50.3
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 8.1e-84 315.1 407 42.3
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 1.2e-82 311.2 338 46.4
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 5.8e-82 308.9 399 43.9
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 2.2e-81 307.0 320 49.4
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 1.4e-80 304.3 372 45.2
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 4.1e-80 302.8 405 42.0
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 9.2e-80 301.6 396 42.2
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 9.2e-80 301.6 398 42.5
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.6e-79 300.8 309 50.8
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 2.1e-79 300.4 398 42.2
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.3e-78 297.7 324 50.0
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 2.3e-78 297.0 307 49.8
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 4.3e-77 292.7 210 69.5
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 1.2e-76 291.2 423 40.0
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.1e-75 288.1 397 41.3
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 2.4e-75 287.0 336 48.2
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 3.1e-75 286.6 304 48.7
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 3.1e-75 286.6 396 42.2
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 6.8e-75 285.4 304 48.4
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 4.4e-74 282.7 412 42.7
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 5.4e-72 275.8 437 40.0
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 1.1e-69 268.1 411 41.4
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.5e-69 267.7 375 41.6
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 4.3e-69 266.2 423 38.1
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 2.8e-68 263.5 414 36.7
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 8.1e-68 261.9 301 47.8
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 2.3e-62 243.8 267 48.7
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.3e-52 211.5 183 62.3
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 2.5e-45 187.2 430 31.4
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.0e-38 165.2 195 42.6
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 1.8e-35 154.5 258 34.9
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 5.9e-34 149.4 220 41.8
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 2.8e-28 130.6 248 32.7
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 6.3e-28 129.4 406 26.1
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 2.0e-26 124.4 152 40.1
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 5.5e-24 116.3 208 36.1
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 7.9e-23 112.5 203 34.5
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.2e-18 98.6 184 34.8
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 5.7e-13 79.7 138 34.1
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 2.0e-10 71.2 173 30.6
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 4.2e-08 63.5 100 38.0
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 2.7e-07 60.8 138 41.3
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 3.0e-06 57.4 81 39.5
HPP92_007178 Vanilla planifolia HOM05D006967 ORTHO05D008692 3.0e-06 57.4 94 30.9


User provided reference genes

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