Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001219g0180 Nicotiana tabacum HOM05D005291 ORTHO05D006556 8.5e-54 213.8 138 100.0
CAN.G675.17 Capsicum annuum HOM05D005291 ORTHO05D006556 2.3e-43 179.1 133 75.2
PGSC0003DMG400021144 Solanum tuberosum HOM05D005291 ORTHO05D006556 3.4e-42 175.3 127 76.4
CAN.G675.15 Capsicum annuum HOM05D005291 ORTHO05D006556 7.5e-42 174.1 134 74.6
Solyc02g069450.3 Solanum lycopersicum HOM05D005291 ORTHO05D006556 7.0e-40 167.5 127 76.4
Sopen02g018600 Solanum pennellii HOM05D005291 ORTHO05D006556 1.2e-39 166.8 127 74.0
Solyc02g069460.3 Solanum lycopersicum HOM05D005291 ORTHO05D006556 2.0e-39 166.0 127 76.4
Sopen02g018590 Solanum pennellii HOM05D005291 ORTHO05D006556 3.5e-39 165.2 127 71.7
MSTRG.7576 Avicennia marina HOM05D005291 ORTHO05D006556 2.9e-38 162.2 128 70.3
SGA_v2.0_scaffold298G47643 Striga asiatica HOM05D005291 ORTHO05D006556 5.5e-37 157.9 128 71.1
Cc09_g06610 Coffea canephora HOM05D005291 ORTHO05D006556 1.2e-36 156.8 129 68.2
Nitab4.5_0008761g0030 Nicotiana tabacum HOM05D005291 ORTHO05D006556 1.2e-36 156.8 110 83.6
Migut.M01951 Erythranthe guttata HOM05D005291 ORTHO05D006556 6.1e-36 154.5 130 68.5
Dinv01911 Davidia involucrata HOM05D005291 ORTHO05D006556 6.8e-35 151.0 130 66.2
Nitab4.5_0005250g0030 Nicotiana tabacum HOM05D005291 ORTHO05D006556 1.2e-34 150.2 109 98.2
unitig_92.g28186 Utricularia gibba HOM05D005291 ORTHO05D006556 1.5e-34 149.8 127 65.4
Solyc08g074307.2 Solanum lycopersicum HOM05D005291 ORTHO05D006556 3.4e-34 148.7 126 69.8
MSTRG.16324 Avicennia marina HOM05D005291 ORTHO05D006556 5.7e-34 147.9 129 65.9
Peaxi162Scf00267g01017 Petunia axillaris HOM05D005291 ORTHO05D006556 4.9e-33 144.8 127 73.2
Lj1A1140T41 Lonicera japonica HOM05D005291 ORTHO05D006556 1.8e-32 142.9 128 65.6
RcHm_v2.0_Chr5g0019221 Rosa chinensis HOM05D005291 ORTHO05D006556 7.0e-32 141.0 127 63.8
SGA_v2.0_scaffold223G42900 Striga asiatica HOM05D005291 ORTHO05D006556 9.1e-32 140.6 140 66.4
FAN21G3936 Fragaria x ananassa HOM05D005291 ORTHO05D006556 2.0e-31 139.4 127 63.0
FAN25G3276 Fragaria x ananassa HOM05D005291 ORTHO05D006556 2.0e-31 139.4 127 63.0
TAR626G0502 Trochodendron aralioides HOM05D005291 ORTHO05D006556 2.7e-31 139.0 127 70.1
Duzib235G0861 Durio zibethinus HOM05D005291 ORTHO05D006556 3.5e-31 138.7 127 66.9
Gorai.010G170600 Gossypium raimondii HOM05D005291 ORTHO05D006556 4.5e-31 138.3 127 65.4
Prupe.4G105600 Prunus persica HOM05D005291 ORTHO05D006556 4.5e-31 138.3 128 61.7
Sed0015115 Sechium edule HOM05D005291 ORTHO05D006556 4.5e-31 138.3 130 63.8
QL05p062860 Quercus lobata HOM05D005291 ORTHO05D006556 5.9e-31 137.9 127 66.1
Haze_21115 Corylus avellana HOM05D005291 ORTHO05D006556 7.7e-31 137.5 127 65.4
FvH4_3g11800 Fragaria vesca HOM05D005291 ORTHO05D006556 1.0e-30 137.1 127 62.2
Sed0028144 Sechium edule HOM05D005291 ORTHO05D006556 1.0e-30 137.1 130 63.8
Haze_21121 Corylus avellana HOM05D005291 ORTHO05D006556 1.3e-30 136.7 127 65.4
Gohir.A06G138900 Gossypium hirsutum HOM05D005291 ORTHO05D006556 1.3e-30 136.7 127 64.6
Gohir.D06G146300 Gossypium hirsutum HOM05D005291 ORTHO05D006556 1.3e-30 136.7 127 64.6
Thecc.06G135600 Theobroma cacao HOM05D005291 ORTHO05D006556 1.7e-30 136.3 127 63.8
Duzib160G0628 Durio zibethinus HOM05D005291 ORTHO05D006556 2.3e-30 136.0 129 66.7
CsaV3_1G046680 Cucumis sativus L. HOM05D005291 ORTHO05D006556 3.8e-30 135.2 130 71.5
MELO3C021788.2 Cucumis melo HOM05D005291 ORTHO05D006556 5.0e-30 134.8 130 63.8
ClCG01G009000 Citrullus lanatus HOM05D005291 ORTHO05D006556 6.6e-30 134.4 134 62.7
COL.COLO4_30928 Corchorus olitorius HOM05D005291 ORTHO05D006556 6.6e-30 134.4 127 64.6
Eucgr.K00389 Eucalyptus grandis HOM05D005291 ORTHO05D006556 6.6e-30 134.4 127 61.4
Nn7g37951 Nelumbo nucifera HOM05D005291 ORTHO05D006556 6.6e-30 134.4 127 63.0
Cpa.g.sc882.3 Carica papaya HOM05D005291 ORTHO05D006556 1.1e-29 133.7 127 66.9
Gohir.A05G143600 Gossypium hirsutum HOM05D005291 ORTHO05D006556 1.1e-29 133.7 127 63.8
CiPaw.10G112100 Carya illinoinensis HOM05D005291 ORTHO05D006556 1.5e-29 133.3 127 59.8
TWI73G1099 Tripterygium wilfordii HOM05D005291 ORTHO05D006556 1.5e-29 133.3 127 61.4
CANSAT35G1185 Cannabis sativa HOM05D005291 ORTHO05D006556 3.3e-29 132.1 130 60.8
Gohir.D05G145900 Gossypium hirsutum HOM05D005291 ORTHO05D006556 3.3e-29 132.1 127 63.0
Gorai.009G149800 Gossypium raimondii HOM05D005291 ORTHO05D006556 3.3e-29 132.1 127 63.0
Oeu008978.1 Olea europaea HOM05D005291 ORTHO05D006556 3.3e-29 132.1 128 60.9
Manes.16G056000 Manihot esculenta HOM05D005291 ORTHO05D006556 4.2e-29 131.7 131 62.6
Lj6g0012734 Lotus japonicus HOM05D005291 ORTHO05D006556 5.5e-29 131.3 133 62.4
Aqoxy1G01510 Aquilegia oxysepala HOM05D005291 ORTHO05D006556 9.5e-29 130.6 127 63.0
CiPaw.09G150600 Carya illinoinensis HOM05D005291 ORTHO05D006556 9.5e-29 130.6 127 62.2
TWI09G0987 Tripterygium wilfordii HOM05D005291 ORTHO05D006556 3.6e-28 128.6 127 59.8
Potri.001G081500 Populus trichocarpa HOM05D005291 ORTHO05D006556 4.7e-28 128.3 127 64.6
Hma1.2p1_0326F.1_g126220 Hydrangea macrophylla HOM05D005291 ORTHO05D006556 6.1e-28 127.9 127 63.8
MD05G1259200 Malus domestica HOM05D005291 ORTHO05D006556 6.1e-28 127.9 128 58.6
MD10G1238800 Malus domestica HOM05D005291 ORTHO05D006556 8.0e-28 127.5 128 57.8
Sabra01G0058700 Salix brachista HOM05D005291 ORTHO05D006556 8.0e-28 127.5 127 64.6
Lalb_Chr18g0057801 Lupinus albus HOM05D005291 ORTHO05D006556 1.0e-27 127.1 134 68.7
Ciclev10016540m.g Citrus clementina HOM05D005291 ORTHO05D006556 1.8e-27 126.3 130 62.3
arahy.Tifrunner.gnm1.ann1.VHAI7W Arachis hypogaea HOM05D005291 ORTHO05D006556 2.3e-27 125.9 132 63.6
vmacro03483 Vaccinium macrocarpon HOM05D005291 ORTHO05D006556 3.0e-27 125.6 130 60.0
VMungo1215G2240 Vigna mungo HOM05D005291 ORTHO05D006556 4.0e-27 125.2 134 62.7
Atru.chr10.620 Acer truncatum HOM05D005291 ORTHO05D006556 5.2e-27 124.8 127 62.2
arahy.Tifrunner.gnm1.ann1.PX7M3V Arachis hypogaea HOM05D005291 ORTHO05D006556 5.2e-27 124.8 132 62.9
Medtr2g029370 Medicago truncatula HOM05D005291 ORTHO05D006556 1.2e-26 123.6 127 61.4
Rhsim13G0127200 Rhododendron simsii HOM05D005291 ORTHO05D006556 3.4e-26 122.1 130 60.8
THA.LOC104814370 Tarenaya hassleriana HOM05D005291 ORTHO05D006556 4.4e-26 121.7 130 60.8
Potri.003G148900 Populus trichocarpa HOM05D005291 ORTHO05D006556 3.7e-25 118.6 104 68.3
Nitab4.5_0001312g0020 Nicotiana tabacum HOM05D005291 ORTHO05D006556 4.9e-25 118.2 109 67.0
BcaB04g18162 Brassica carinata HOM05D005291 ORTHO05D006556 6.3e-25 117.9 130 59.2
EL10Ac9g21406 Beta vulgaris HOM05D005291 ORTHO05D006556 8.3e-25 117.5 131 56.5
AL1G49710 Arabidopsis lyrata HOM05D005291 ORTHO05D006556 1.4e-24 116.7 129 58.9
BcaC05g27163 Brassica carinata HOM05D005291 ORTHO05D006556 1.8e-24 116.3 129 58.1
A09p34920 Brassica napus HOM05D005291 ORTHO05D006556 1.8e-24 116.3 129 58.1
C05p30540 Brassica napus HOM05D005291 ORTHO05D006556 1.8e-24 116.3 129 58.1
BolC5t31789H Brassica oleracea HOM05D005291 ORTHO05D006556 1.8e-24 116.3 129 58.1
BraA09t39022Z Brassica rapa HOM05D005291 ORTHO05D006556 1.8e-24 116.3 129 58.1
Aa31LG9G15960 Aethionema arabicum HOM05D005291 ORTHO05D006556 2.4e-24 115.9 129 58.1
BcaC07g37765 Brassica carinata HOM05D005291 ORTHO05D006556 2.4e-24 115.9 127 57.5
BolC8t48151H Brassica oleracea HOM05D005291 ORTHO05D006556 2.4e-24 115.9 127 57.5
TPR.G26533 Trifolium pratense HOM05D005291 ORTHO05D006556 2.4e-24 115.9 135 57.8
BcaB07g32794 Brassica carinata HOM05D005291 ORTHO05D006556 3.2e-24 115.5 127 59.1
Carub.0001s2977 Capsella rubella HOM05D005291 ORTHO05D006556 3.2e-24 115.5 129 58.1
CDE12G0048 Ceratophyllum demersum HOM05D005291 ORTHO05D006556 3.2e-24 115.5 129 58.9
HanXRQChr12g0368521 Helianthus annuus HOM05D005291 ORTHO05D006556 3.2e-24 115.5 129 55.0
Sc10g0008690 Simmondsia chinensis HOM05D005291 ORTHO05D006556 3.2e-24 115.5 127 55.9
AT1G31330 Arabidopsis thaliana HOM05D005291 ORTHO05D006556 5.4e-24 114.8 129 58.1
A08p10630 Brassica napus HOM05D005291 ORTHO05D006556 5.4e-24 114.8 130 57.7
BraA08t33062Z Brassica rapa HOM05D005291 ORTHO05D006556 5.4e-24 114.8 130 57.7
Actinidia33638 Actinidia chinensis HOM05D005291 ORTHO05D006556 7.0e-24 114.4 129 58.9
CARHR030790 Cardamine hirsuta HOM05D005291 ORTHO05D006556 7.0e-24 114.4 130 58.5
Psat1g169240 Pisum sativum HOM05D005291 ORTHO05D006556 7.0e-24 114.4 73 84.9
CDE01G0253 Ceratophyllum demersum HOM05D005291 ORTHO05D006556 9.2e-24 114.0 128 57.8
PSO170G0936 Papaver somniferum HOM05D005291 ORTHO05D006556 9.2e-24 114.0 131 65.6
A07p09430 Brassica napus HOM05D005291 ORTHO05D006556 1.2e-23 113.6 131 57.3
BolC7t41950H Brassica oleracea HOM05D005291 ORTHO05D006556 1.2e-23 113.6 131 57.3
BraA07t28739Z Brassica rapa HOM05D005291 ORTHO05D006556 1.2e-23 113.6 131 57.3
CDE12G0451 Ceratophyllum demersum HOM05D005291 ORTHO05D006556 1.2e-23 113.6 129 58.9
Phvul.L001631 Phaseolus vulgaris HOM05D005291 ORTHO05D006556 1.6e-23 113.2 134 56.7
CDE02G3915 Ceratophyllum demersum HOM05D005291 ORTHO05D006556 2.0e-23 112.8 129 66.7
AUR62013057 Chenopodium quinoa HOM05D005291 ORTHO05D006556 2.0e-23 112.8 134 57.5
HanXRQChr17g0563071 Helianthus annuus HOM05D005291 ORTHO05D006556 2.0e-23 112.8 131 56.5
CDE05G2870 Ceratophyllum demersum HOM05D005291 ORTHO05D006556 2.7e-23 112.5 129 58.9
Thhalv10008731m.g Eutrema salsugineum HOM05D005291 ORTHO05D006556 2.7e-23 112.5 129 55.8
Sp1g27160 Schrenkiella parvula HOM05D005291 ORTHO05D006556 2.7e-23 112.5 129 55.8
Ca_00782_v3 Cicer arietinum L. HOM05D005291 ORTHO05D006556 3.5e-23 112.1 127 73.2
Ca_31080_v3 Cicer arietinum L. HOM05D005291 ORTHO05D006556 3.5e-23 112.1 127 73.2
AUR62010064 Chenopodium quinoa HOM05D005291 ORTHO05D006556 4.6e-23 111.7 134 57.5
C07p14510 Brassica napus HOM05D005291 ORTHO05D006556 5.9e-23 111.3 67 88.1
Oeu008714.1 Olea europaea HOM05D005291 ORTHO05D006556 7.8e-23 110.9 114 59.6
Hund13464 Selenicereus undatus HOM05D004766 ORTHO05D006159 1.0e-22 110.5 134 55.2
Ah.01g022810 Amaranthus hybridus HOM05D005291 ORTHO05D006556 1.7e-22 109.8 130 53.8
ECA234G0485 Erigeron canadensis HOM05D005291 ORTHO05D006556 1.7e-22 109.8 130 56.2
PSO017G5348 Papaver somniferum HOM05D005291 ORTHO05D006556 1.7e-22 109.8 131 63.4
Lsat_1_v5_gn_6_37081 Lactuca sativa HOM05D005291 ORTHO05D006556 6.6e-22 107.8 132 54.5
Glyma.05G022900 Glycine max HOM05D005291 ORTHO05D006556 1.5e-21 106.7 133 58.6
Ah.01g008620 Amaranthus hybridus HOM05D005291 ORTHO05D006556 5.6e-21 104.8 132 53.8
Cfa000743 Carpinus fangiana HOM05D005291 ORTHO05D006556 1.2e-20 103.6 54 96.3
Actinidia29307 Actinidia chinensis HOM05D005291 ORTHO05D006556 2.8e-20 102.4 132 66.7
Pp3c18_10730 Physcomitrium patens HOM05D005291 ORTHO05D006556 1.8e-19 99.8 58 84.5
HPP92_017743 Vanilla planifolia HOM05D005291 ORTHO05D006556 1.8e-19 99.8 80 68.8
ATR0763G286 Amborella trichopoda HOM05D005291 ORTHO05D006556 2.3e-19 99.4 135 49.6
Pp3c21_8800 Physcomitrium patens HOM05D005291 ORTHO05D006556 3.1e-19 99.0 58 84.5
Pp3c11_18230 Physcomitrium patens HOM05D005291 ORTHO05D006556 6.8e-19 97.8 58 82.8
Pp3c22_10850 Physcomitrium patens HOM05D005291 ORTHO05D006556 8.9e-19 97.4 58 82.8
Os03g0778100 Oryza sativa ssp. japonica HOM05D005291 ORTHO05D006556 2.0e-18 96.3 55 87.3
Zm00001eb213670 Zea mays HOM05D005291 ORTHO05D006556 5.8e-18 94.7 70 74.3
SMO367G0762 Selaginella moellendorffii HOM05D005291 ORTHO05D006556 6.4e-17 91.3 73 65.8
AagrBONN_evm.TU.Sc2ySwM_344.4326 Anthoceros agrestis HOM05D005291 ORTHO05D006556 5.4e-16 88.2 60 73.3
Mapoly0075s0057 Marchantia polymorpha HOM05D005291 ORTHO05D006556 9.2e-16 87.4 58 74.1
Cre09.g412100 Chlamydomonas reinhardtii HOM05D005291 ORTHO05D006556 1.4e-11 73.6 67 56.7
CBR_g568 Chara braunii HOM05D005291 ORTHO05D006556 2.3e-11 72.8 67 58.2
MCO07G173 Micromonas commoda HOM05D005291 ORTHO05D006556 6.8e-11 71.2 51 64.7
HanXRQChr16g0517321 Helianthus annuus HOM05D005291 ORTHO05D006556 2.0e-10 69.7 44 81.8
arahy.Tifrunner.gnm1.ann1.7UV7DW Arachis hypogaea HOM05D005291 ORTHO05D083431 1.3e-06 57.0 95 44.2


User provided reference genes

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