Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 4.8e-263 910.6 455 100.0
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 4.2e-243 844.3 455 93.0
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 2.3e-228 795.4 455 87.7
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 8.6e-228 793.5 455 87.7
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 8.6e-228 793.5 455 87.7
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.7e-223 779.2 457 86.7
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 7.8e-205 717.2 456 81.4
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 7.1e-190 667.5 458 72.7
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 7.8e-189 664.1 456 71.7
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 6.6e-188 661.0 456 71.5
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 8.7e-188 660.6 456 72.4
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 5.6e-187 657.9 471 70.1
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 5.4e-182 641.3 440 70.9
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 9.3e-182 640.6 460 70.0
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 6.0e-181 637.9 463 68.7
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.1e-179 633.6 456 68.9
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.1e-179 633.6 448 71.2
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.8e-178 629.0 443 70.9
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.7e-178 628.6 454 67.6
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.1e-177 627.1 454 67.6
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.4e-177 626.7 446 69.7
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 3.1e-177 625.5 442 70.1
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 9.0e-177 624.0 444 69.6
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 1.5e-176 623.2 472 67.4
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 2.0e-176 622.9 446 69.3
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.6e-176 622.5 454 68.5
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 3.4e-176 622.1 442 69.7
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.7e-175 619.8 442 68.8
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.2e-175 619.4 446 69.5
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 6.4e-175 617.8 445 68.5
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 8.4e-175 617.5 458 66.4
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 1.1e-174 617.1 446 68.8
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 1.1e-174 617.1 476 64.7
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.4e-174 616.7 443 69.3
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.9e-174 616.3 453 66.4
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.4e-174 615.9 443 68.8
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 4.2e-174 615.1 446 68.2
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.6e-173 613.2 445 68.5
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 6.0e-173 611.3 446 66.1
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.8e-172 609.8 453 66.9
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.9e-172 608.6 445 68.1
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.6e-171 604.7 454 65.4
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 9.6e-171 604.0 446 67.0
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.3e-170 603.6 444 67.6
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 2.1e-170 602.8 454 65.6
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 8.2e-170 600.9 454 65.4
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 8.2e-170 600.9 445 67.6
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 8.2e-170 600.9 445 67.6
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 4.0e-169 598.6 455 65.3
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 5.3e-169 598.2 445 65.6
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 6.9e-169 597.8 455 65.1
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 2.6e-168 595.9 442 67.6
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.7e-167 593.2 445 65.4
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 2.9e-167 592.4 446 65.9
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 6.5e-167 591.3 444 65.8
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 8.4e-167 590.9 443 65.9
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 8.4e-167 590.9 443 65.9
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.4e-166 590.1 436 67.0
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.4e-166 590.1 446 65.5
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.9e-166 589.7 456 64.3
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.9e-166 589.7 445 65.2
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.5e-166 589.3 442 64.7
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 2.5e-166 589.3 442 65.2
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 5.5e-166 588.2 447 66.0
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 9.3e-166 587.4 445 66.1
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.2e-165 587.0 442 66.3
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 3.5e-165 585.5 447 65.5
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 3.5e-165 585.5 457 65.2
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 4.6e-165 585.1 447 65.5
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 7.9e-165 584.3 447 65.5
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.3e-164 583.6 442 66.5
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 2.3e-164 582.8 447 65.5
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 2.3e-164 582.8 564 56.6
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 5.1e-164 581.6 447 65.1
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.5e-163 579.3 457 64.8
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 3.3e-163 578.9 445 64.3
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 3.3e-163 578.9 446 65.2
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 4.3e-163 578.6 446 64.6
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 4.3e-163 578.6 444 63.5
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 7.4e-163 577.8 448 63.4
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.3e-162 577.0 446 64.8
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.6e-162 576.6 443 63.0
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.2e-162 576.2 446 64.3
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 3.7e-162 575.5 446 64.6
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.1e-161 572.4 446 63.0
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 4.1e-161 572.0 505 59.0
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 5.3e-161 571.6 447 64.0
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 3.4e-160 568.9 447 62.4
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.7e-159 566.6 450 64.0
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 2.9e-159 565.8 450 63.8
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 3.8e-159 565.5 445 64.0
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.1e-158 563.9 456 63.8
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.6e-157 560.1 444 62.6
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 2.1e-157 559.7 442 60.6
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.3e-156 556.2 444 62.2
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.5e-155 552.7 444 61.7
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.3e-155 552.4 444 61.9
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.3e-151 540.4 377 69.8
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.9e-151 539.3 438 61.4
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.1e-150 537.3 446 59.9
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 4.2e-150 535.4 450 60.0
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.0e-148 529.3 442 57.0
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.8e-137 493.4 458 56.8
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.6e-136 490.3 453 53.6
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 2.6e-136 489.6 441 57.4
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 5.0e-135 485.3 443 53.3
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 9.4e-134 481.1 358 67.6
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 7.0e-129 464.9 447 51.9
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 4.5e-128 462.2 444 51.4
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.4e-121 440.7 351 63.2
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.2e-120 437.6 325 68.6
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 8.0e-117 424.9 448 48.0
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 5.7e-115 418.7 294 69.4
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 1.3e-114 417.5 453 52.3
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 2.6e-107 393.3 288 66.7
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 7.5e-107 391.7 444 48.6
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 2.5e-86 323.6 430 42.8
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 1.7e-79 300.8 218 68.8
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 1.4e-73 281.2 182 73.6
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 4.2e-73 279.6 221 59.7
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 6.0e-64 249.2 314 46.5
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.7e-50 204.5 136 73.5
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.9e-46 191.0 103 91.3
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.3e-31 141.0 87 81.6
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 3.9e-31 140.2 91 68.1
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 2.8e-29 134.0 91 63.7
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 8.5e-10 69.3 41 70.7
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 1.1e-09 68.9 91 46.2
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 9.4e-09 65.9 379 21.9


User provided reference genes

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