Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 6.3e-274 946.8 470 100.0
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 4.8e-181 638.3 537 66.3
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 8.1e-181 637.5 577 62.2
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 2.7e-168 595.9 540 63.3
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 4.6e-168 595.1 540 63.3
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.4e-132 477.2 314 79.9
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 4.0e-111 406.0 508 48.8
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 1.5e-110 404.1 481 51.1
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 7.0e-108 395.2 563 45.6
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 3.4e-102 376.3 540 44.4
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.3e-101 374.4 475 47.8
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 4.6e-99 365.9 558 42.5
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 8.6e-98 361.7 473 46.7
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 5.6e-97 359.0 528 45.3
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 4.7e-96 355.9 487 45.6
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 4.7e-96 355.9 564 42.0
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.1e-95 354.8 572 41.6
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.4e-95 354.4 469 47.1
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 5.8e-94 349.0 606 40.9
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 7.5e-94 348.6 489 44.8
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 6.4e-93 345.5 488 45.3
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 4.6e-91 339.3 565 41.9
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 4.6e-91 339.3 569 41.3
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 5.1e-90 335.9 558 41.4
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 6.6e-90 335.5 578 40.5
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 1.5e-89 334.3 459 44.0
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 7.3e-89 332.0 481 43.7
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 4.7e-88 329.3 468 44.2
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 6.2e-88 328.9 565 41.4
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.4e-87 327.8 578 39.6
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 2.3e-87 327.0 496 43.1
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 6.8e-87 325.5 567 41.1
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 1.2e-86 324.7 602 38.7
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 2.6e-86 323.6 609 38.8
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 5.8e-86 322.4 476 43.3
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 7.5e-86 322.0 487 43.1
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 9.9e-86 321.6 571 39.9
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 2.2e-85 320.5 507 41.0
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.9e-85 320.1 487 41.9
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.9e-84 317.4 481 43.9
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 4.1e-84 316.2 503 41.6
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 5.4e-84 315.8 470 43.6
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 5.4e-84 315.8 478 42.1
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 9.2e-84 315.1 503 41.4
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 1.6e-83 314.3 503 42.1
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 1.6e-83 314.3 488 42.0
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.1e-83 313.9 541 40.3
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 3.5e-83 313.2 494 41.5
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 6.0e-83 312.4 484 43.0
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 6.0e-83 312.4 606 39.3
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 3.9e-82 309.7 480 43.5
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 3.9e-82 309.7 469 43.5
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 2.5e-81 307.0 481 42.4
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 2.5e-81 307.0 446 42.8
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 1.6e-80 304.3 461 42.3
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 4.7e-80 302.8 458 43.0
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 8.1e-80 302.0 467 43.5
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 8.1e-80 302.0 442 43.0
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 1.8e-79 300.8 466 42.5
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 3.1e-79 300.1 458 42.4
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 6.8e-79 298.9 465 43.0
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 2.0e-78 297.4 474 40.7
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 4.4e-78 296.2 441 45.1
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 5.8e-78 295.8 479 40.9
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 5.8e-78 295.8 467 42.2
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 9.9e-78 295.0 457 42.0
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 2.9e-77 293.5 517 38.7
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 6.4e-77 292.4 456 41.9
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 1.4e-76 291.2 443 43.8
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 1.9e-76 290.8 491 41.1
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.9e-76 290.8 492 40.4
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 3.2e-76 290.0 480 41.0
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 4.2e-76 289.7 445 43.6
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 5.4e-76 289.3 581 36.5
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 7.1e-76 288.9 464 42.9
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 9.3e-76 288.5 459 42.7
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 1.2e-75 288.1 564 37.4
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 6.0e-75 285.8 467 42.0
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 7.8e-75 285.4 470 40.0
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.3e-74 284.6 273 57.9
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.3e-74 283.9 516 38.0
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 1.9e-73 280.8 440 43.0
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 7.3e-73 278.9 436 42.9
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 1.3e-72 278.1 463 41.5
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 3.6e-72 276.6 443 42.0
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.1e-71 275.0 480 40.8
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.8e-71 274.2 479 39.9
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 4.0e-71 273.1 497 39.0
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.9e-71 272.3 456 41.9
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 9.0e-71 271.9 467 40.9
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 2.6e-70 270.4 464 41.4
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 5.1e-66 256.1 426 40.8
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 2.9e-61 240.4 407 39.3
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 8.4e-53 212.2 611 30.8
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 9.3e-52 208.8 558 32.3
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 9.3e-52 208.8 558 32.3
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 3.5e-51 206.8 354 40.1
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 7.6e-46 189.1 562 31.5
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.2e-43 181.8 254 46.9
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 7.9e-43 179.1 320 38.1
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 2.2e-37 161.0 229 44.1
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 4.6e-35 153.3 377 31.6
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.9e-30 136.3 256 35.9
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.0e-29 135.6 220 39.1
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 2.2e-29 134.4 160 50.0
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 6.5e-29 132.9 109 67.0
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 5.5e-28 129.8 404 28.5
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 2.8e-24 117.5 142 50.0
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 4.8e-24 116.7 142 49.3
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 6.3e-24 116.3 68 83.8
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.5e-22 111.7 68 88.2
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 5.0e-21 106.7 67 77.6
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 6.5e-21 106.3 170 40.6
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 1.2e-19 102.1 147 42.2
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 3.7e-16 90.5 87 55.2
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 3.8e-13 80.5 50 82.0
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.0e-09 68.2 124 41.1
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 1.8e-07 61.6 186 28.5
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 9.1e-07 59.3 331 24.5


User provided reference genes

Program Settings