Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001128g0190 Nicotiana tabacum HOM05D000297 ORTHO05D286131 1.8e-47 192.2 93 100.0
Nitab4.5_0004669g0050 Nicotiana tabacum HOM05D000297 ORTHO05D286906 2.0e-30 135.6 81 80.2
Nitab4.5_0001604g0010 Nicotiana tabacum HOM05D000297 ORTHO05D000193 1.7e-10 69.3 71 53.5
PGSC0003DMG400022680 Solanum tuberosum HOM05D000297 ORTHO05D000193 1.5e-09 66.2 66 54.5
Solyc01g067130.4 Solanum lycopersicum HOM05D000297 ORTHO05D000193 3.3e-09 65.1 66 53.0
Sopen01g028840 Solanum pennellii HOM05D000297 ORTHO05D000193 3.3e-09 65.1 66 53.0
CiPaw.01G150000 Carya illinoinensis HOM05D000297 ORTHO05D000193 4.3e-09 64.7 78 51.3
Eucgr.B01303 Eucalyptus grandis HOM05D000297 ORTHO05D000193 5.6e-09 64.3 66 53.0
Nitab4.5_0003749g0020 Nicotiana tabacum HOM05D000297 ORTHO05D000193 7.3e-09 63.9 66 53.0
Medtr0392s0020 Medicago truncatula HOM05D000297 ORTHO05D000193 9.6e-09 63.5 74 50.0
Ca_02422_v3 Cicer arietinum L. HOM05D000297 ORTHO05D000193 1.3e-08 63.2 74 50.0
Dinv38299 Davidia involucrata HOM05D000297 ORTHO05D000193 1.6e-08 62.8 69 49.3
Eucgr.B01293 Eucalyptus grandis HOM05D000297 ORTHO05D000193 2.1e-08 62.4 66 51.5
Glyma.15G153900 Glycine max HOM05D000297 ORTHO05D000193 2.1e-08 62.4 71 52.1
Peaxi162Scf00534g00022 Petunia axillaris HOM05D000297 ORTHO05D000193 2.8e-08 62.0 66 51.5
Ciclev10006769m.g Citrus clementina HOM05D000297 ORTHO05D000193 6.2e-08 60.8 69 46.4
Haze_01227 Corylus avellana HOM05D000297 ORTHO05D000193 6.2e-08 60.8 66 51.5
Hma1.2p1_0698F.1_g205270 Hydrangea macrophylla HOM05D000297 ORTHO05D000193 8.1e-08 60.5 78 44.9
Oeu001121.1 Olea europaea HOM05D000297 ORTHO05D000193 8.1e-08 60.5 91 40.7
QL06p008547 Quercus lobata HOM05D000297 ORTHO05D000193 8.1e-08 60.5 66 51.5
SalBow2G1882 Salvia bowleyana HOM05D000297 ORTHO05D000193 1.1e-07 60.1 93 43.0
TWI09G0815 Tripterygium wilfordii HOM05D000297 ORTHO05D000193 1.1e-07 60.1 69 44.9
Prupe.1G138500 Prunus persica HOM05D000297 ORTHO05D000193 1.4e-07 59.7 66 48.5
Lalb_Chr13g0303701 Lupinus albus HOM05D000297 ORTHO05D000193 2.4e-07 58.9 64 50.0
SGA_v2.0_scaffold67G22664 Striga asiatica HOM05D000297 ORTHO05D000193 2.4e-07 58.9 66 50.0
Thecc.04G282700 Theobroma cacao HOM05D000297 ORTHO05D000193 2.4e-07 58.9 69 47.8
COL.COLO4_13894 Corchorus olitorius HOM05D000297 ORTHO05D000193 3.1e-07 58.5 78 43.6
Eucgr.H03892 Eucalyptus grandis HOM05D000297 ORTHO05D000193 3.1e-07 58.5 66 47.0
MD13G1170200 Malus domestica HOM05D000297 ORTHO05D000193 3.1e-07 58.5 66 50.0
CiPaw.02G084100 Carya illinoinensis HOM05D000297 ORTHO05D000193 4.0e-07 58.2 56 57.1
Cc00_g10600 Coffea canephora HOM05D000297 ORTHO05D000193 4.0e-07 58.2 69 47.8
Eucgr.B01299 Eucalyptus grandis HOM05D000297 ORTHO05D000193 4.0e-07 58.2 66 50.0
Eucgr.B01300 Eucalyptus grandis HOM05D000297 ORTHO05D000193 4.0e-07 58.2 66 50.0
Lj6g0008109 Lotus japonicus HOM05D000297 ORTHO05D000193 4.0e-07 58.2 64 51.6
VMungo1309G1900 Vigna mungo HOM05D000297 ORTHO05D000193 4.0e-07 58.2 68 48.5
Glyma.17G025300 Glycine max HOM05D000297 ORTHO05D000193 5.3e-07 57.8 66 48.5
Medtr4g119500 Medicago truncatula HOM05D000297 ORTHO05D000193 5.3e-07 57.8 64 50.0
Phvul.003G103500 Phaseolus vulgaris HOM05D000297 ORTHO05D000193 5.3e-07 57.8 69 46.4
Psat4g028560 Pisum sativum HOM05D000297 ORTHO05D000193 5.3e-07 57.8 64 50.0
TPR.G3184 Trifolium pratense HOM05D000297 ORTHO05D000193 5.3e-07 57.8 64 50.0
VMungo1215G2135 Vigna mungo HOM05D000297 ORTHO05D000193 5.3e-07 57.8 69 46.4
Manes.03G193600 Manihot esculenta HOM05D000297 ORTHO05D000193 6.9e-07 57.4 66 50.0
Nitab4.5_0006596g0010 Nicotiana tabacum HOM05D000297 ORTHO05D000193 6.9e-07 57.4 66 47.0
Potri.008G210300 Populus trichocarpa HOM05D000297 ORTHO05D000193 6.9e-07 57.4 66 50.0
Aqoxy2G03031 Aquilegia oxysepala HOM05D000297 ORTHO05D000193 9.0e-07 57.0 68 44.1
Duzib052G1072 Durio zibethinus HOM05D000297 ORTHO05D000193 9.0e-07 57.0 69 47.8
Migut.N00100 Erythranthe guttata HOM05D000297 ORTHO05D000193 9.0e-07 57.0 65 49.2
Gohir.A08G117300 Gossypium hirsutum HOM05D000297 ORTHO05D000193 9.0e-07 57.0 66 47.0
Thecc.01G294500 Theobroma cacao HOM05D000297 ORTHO05D000193 1.5e-06 56.2 66 43.9
COL.COLO4_07994 Corchorus olitorius HOM05D000297 ORTHO05D000193 2.0e-06 55.8 66 43.9
Duzib133G1051 Durio zibethinus HOM05D000297 ORTHO05D000193 2.0e-06 55.8 66 43.9
Glyma.07G249000 Glycine max HOM05D000297 ORTHO05D000193 2.0e-06 55.8 66 48.5
Gohir.D08G138100 Gossypium hirsutum HOM05D000297 ORTHO05D000193 2.0e-06 55.8 66 45.5
Gorai.004G141600 Gossypium raimondii HOM05D000297 ORTHO05D000193 2.0e-06 55.8 66 45.5
Cpa.g.sc287.4 Carica papaya HOM05D000297 ORTHO05D000193 2.6e-06 55.5 64 46.9
Cfa015372 Carpinus fangiana HOM05D000297 ORTHO05D000193 2.6e-06 55.5 64 50.0
Duzib212G0267 Durio zibethinus HOM05D000297 ORTHO05D000193 2.6e-06 55.5 72 45.8
Peaxi162Scf00067g00163 Petunia axillaris HOM05D000297 ORTHO05D000193 2.6e-06 55.5 66 43.9
GSVIVG01017741001 Vitis vinifera HOM05D000297 ORTHO05D000193 2.6e-06 55.5 65 47.7
CAN.G1562.4 Capsicum annuum HOM05D000297 ORTHO05D000193 3.4e-06 55.1 66 45.5
Ciclev10024294m.g Citrus clementina HOM05D000297 ORTHO05D000193 3.4e-06 55.1 66 43.9
COL.COLO4_00319 Corchorus olitorius HOM05D000297 ORTHO05D000193 3.4e-06 55.1 65 44.6
DCAR_002460 Daucus carota HOM05D000297 ORTHO05D000193 3.4e-06 55.1 98 36.7
Solyc09g074760.1 Solanum lycopersicum HOM05D000297 ORTHO05D000193 3.4e-06 55.1 66 45.5
Sopen09g029610 Solanum pennellii HOM05D000297 ORTHO05D000193 3.4e-06 55.1 66 43.9
Oeu034509.1 Olea europaea HOM05D000297 ORTHO05D000193 4.4e-06 54.7 61 47.5
DCAR_002808 Daucus carota HOM05D000297 ORTHO05D000193 5.8e-06 54.3 66 43.9
FvH4_1g22110 Fragaria vesca HOM05D000297 ORTHO05D000193 5.8e-06 54.3 101 29.7
FAN19G3190 Fragaria x ananassa HOM05D000297 ORTHO05D000193 5.8e-06 54.3 101 29.7
Gohir.D02G054000 Gossypium hirsutum HOM05D000297 ORTHO05D000193 5.8e-06 54.3 64 46.9
Gorai.005G059500 Gossypium raimondii HOM05D000297 ORTHO05D000193 5.8e-06 54.3 64 46.9
vmacro08128 Vaccinium macrocarpon HOM05D000297 ORTHO05D000193 5.8e-06 54.3 81 38.3
Duzib077G0002 Durio zibethinus HOM05D000297 ORTHO05D000193 7.6e-06 53.9 66 42.4
Duzib138G0516 Durio zibethinus HOM05D000297 ORTHO05D000193 7.6e-06 53.9 66 42.4
Duzib151G0573 Durio zibethinus HOM05D000297 ORTHO05D000193 7.6e-06 53.9 78 43.6
FAN28G1838 Fragaria x ananassa HOM05D000297 ORTHO05D000193 7.6e-06 53.9 101 28.7
GSVIVG01010959001 Vitis vinifera HOM05D000297 ORTHO05D000193 7.6e-06 53.9 72 41.7
DCAR_024908 Daucus carota HOM05D000297 ORTHO05D000193 9.9e-06 53.5 100 37.0
FAN23G2432 Fragaria x ananassa HOM05D000297 ORTHO05D000193 9.9e-06 53.5 101 28.7
Nn4g25925 Nelumbo nucifera HOM05D000297 ORTHO05D000193 9.9e-06 53.5 77 40.3
TAR362G0302 Trochodendron aralioides HOM05D000297 ORTHO05D000193 9.9e-06 53.5 91 33.0


User provided reference genes

Program Settings