Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001125g0070 Nicotiana tabacum HOM05D001104 ORTHO05D006624 4.6e-205 717.6 349 100.0
Nitab4.5_0001709g0040 Nicotiana tabacum HOM05D001104 ORTHO05D006624 1.1e-185 653.3 431 78.9
PGSC0003DMG400006955 Solanum tuberosum HOM05D001104 ORTHO05D006624 1.6e-178 629.4 432 75.5
CAN.G973.9 Capsicum annuum HOM05D001104 ORTHO05D006624 2.1e-178 629.0 431 75.2
Solyc02g067740.4 Solanum lycopersicum HOM05D001104 ORTHO05D006624 6.2e-178 627.5 432 75.2
Sopen02g016860 Solanum pennellii HOM05D001104 ORTHO05D006624 6.2e-178 627.5 432 75.2
Oeu062922.1 Olea europaea HOM05D001104 ORTHO05D006624 2.7e-165 585.5 431 68.4
Dinv35069 Davidia involucrata HOM05D001104 ORTHO05D006624 4.6e-165 584.7 431 69.4
Cc07_g02180 Coffea canephora HOM05D001104 ORTHO05D006624 1.9e-163 579.3 431 68.7
Peaxi162Scf00933g00005 Petunia axillaris HOM05D001104 ORTHO05D006624 4.3e-163 578.2 397 75.8
Lj7C592G4 Lonicera japonica HOM05D001104 ORTHO05D006624 9.7e-163 577.0 417 69.1
Rhsim10G0021500 Rhododendron simsii HOM05D001104 ORTHO05D006624 1.3e-162 576.6 431 68.0
CSS0039746 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 2.8e-162 575.5 431 68.0
Hma1.2p1_0993F.1_g245480 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 1.5e-160 569.7 431 67.5
vmacro05831 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 2.0e-160 569.3 425 68.2
CSS0024274 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.7e-159 566.2 435 66.9
MSTRG.15512 Avicennia marina HOM05D001104 ORTHO05D006624 3.8e-159 565.1 431 66.6
Dinv33487 Davidia involucrata HOM05D001104 ORTHO05D006624 1.4e-158 563.1 429 67.1
Actinidia06020 Actinidia chinensis HOM05D001104 ORTHO05D006624 2.5e-158 562.4 429 67.1
Actinidia35743 Actinidia chinensis HOM05D001104 ORTHO05D006624 7.2e-158 560.8 431 66.6
Migut.H00115 Erythranthe guttata HOM05D001104 ORTHO05D006624 2.8e-154 548.9 432 65.7
Cpa.g.sc215.8 Carica papaya HOM05D001104 ORTHO05D006624 2.4e-153 545.8 431 63.3
TWI12G0063 Tripterygium wilfordii HOM05D001104 ORTHO05D006624 1.2e-152 543.5 431 64.5
CiPaw.03G038600 Carya illinoinensis HOM05D001104 ORTHO05D006624 3.8e-151 538.5 431 65.2
Haze_14675 Corylus avellana HOM05D001104 ORTHO05D006624 1.9e-150 536.2 429 65.3
Sed0005946 Sechium edule HOM05D001104 ORTHO05D006624 2.5e-150 535.8 431 63.1
Atru.chr6.2305 Acer truncatum HOM05D001104 ORTHO05D006624 4.2e-150 535.0 431 63.1
Potri.001G348700 Populus trichocarpa HOM05D001104 ORTHO05D006624 9.4e-150 533.9 431 63.3
Prupe.3G285400 Prunus persica HOM05D001104 ORTHO05D006624 2.1e-149 532.7 440 62.0
CsaV3_5G027380 Cucumis sativus L. HOM05D001104 ORTHO05D006624 2.7e-149 532.3 424 63.4
Ciclev10015353m.g Citrus clementina HOM05D001104 ORTHO05D006624 6.1e-149 531.2 431 61.9
MELO3C021546.2 Cucumis melo HOM05D001104 ORTHO05D006624 1.4e-148 530.0 424 63.4
TAR374G1405 Trochodendron aralioides HOM05D001104 ORTHO05D006624 8.8e-148 527.3 422 62.6
MD17G1034200 Malus domestica HOM05D001104 ORTHO05D006624 2.6e-147 525.8 452 60.0
Thecc.04G010000 Theobroma cacao HOM05D001104 ORTHO05D006624 6.3e-146 521.2 431 60.8
SalBow1G5303 Salvia bowleyana HOM05D001104 ORTHO05D006624 1.8e-145 519.6 433 61.9
Duzib147G0036 Durio zibethinus HOM05D001104 ORTHO05D006624 7.0e-145 517.7 430 60.2
ClCG09G018970 Citrullus lanatus HOM05D001104 ORTHO05D006624 2.2e-143 512.7 474 56.1
HanXRQChr14g0450311 Helianthus annuus HOM05D001104 ORTHO05D006624 3.8e-143 511.9 431 60.3
ECA232G2826 Erigeron canadensis HOM05D001104 ORTHO05D006624 1.5e-142 510.0 432 60.6
RcHm_v2.0_Chr2g0171701 Rosa chinensis HOM05D001104 ORTHO05D006624 1.9e-142 509.6 446 59.2
vmacro18250 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 3.2e-142 508.8 367 70.3
ECA238G2799 Erigeron canadensis HOM05D001104 ORTHO05D006624 4.2e-142 508.4 428 59.8
GSVIVG01032469001 Vitis vinifera HOM05D001104 ORTHO05D006624 5.5e-142 508.1 431 59.9
Eucgr.I01793 Eucalyptus grandis HOM05D001104 ORTHO05D006624 9.4e-142 507.3 414 61.4
CANSAT64G0855 Cannabis sativa HOM05D001104 ORTHO05D006624 2.7e-141 505.8 431 60.3
Nn4g22776 Nelumbo nucifera HOM05D001104 ORTHO05D006624 2.7e-141 505.8 432 59.7
HanXRQChr09g0266171 Helianthus annuus HOM05D001104 ORTHO05D006624 8.0e-141 504.2 431 60.1
Ca_04192_v3 Cicer arietinum L. HOM05D001104 ORTHO05D006624 2.3e-140 502.7 401 61.1
COL.COLO4_28978 Corchorus olitorius HOM05D001104 ORTHO05D006624 6.7e-140 501.1 454 57.5
Gohir.A07G220700 Gossypium hirsutum HOM05D001104 ORTHO05D006624 7.5e-139 497.7 431 57.5
Gorai.001G262300 Gossypium raimondii HOM05D001104 ORTHO05D006624 2.2e-138 496.1 431 57.5
Aqoxy3G01030 Aquilegia oxysepala HOM05D001104 ORTHO05D006624 2.8e-138 495.7 434 60.8
PSO478G3469 Papaver somniferum HOM05D001104 ORTHO05D006624 4.8e-138 495.0 432 59.7
arahy.Tifrunner.gnm1.ann1.PA6DSG Arachis hypogaea HOM05D001104 ORTHO05D006624 3.1e-137 492.3 414 59.9
FvH4_6g50760 Fragaria vesca HOM05D001104 ORTHO05D006624 3.1e-137 492.3 438 58.0
Hma1.2p1_3249F.1_g334430 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 3.1e-137 492.3 399 63.7
QL02p076349 Quercus lobata HOM05D001104 ORTHO05D006624 5.3e-137 491.5 422 61.1
FAN05G2035 Fragaria x ananassa HOM05D001104 ORTHO05D006624 9.1e-137 490.7 438 58.0
CSS0016338 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.6e-136 490.0 438 60.7
FAN14G0697 Fragaria x ananassa HOM05D001104 ORTHO05D006624 1.6e-136 490.0 438 57.8
PSO017G6424 Papaver somniferum HOM05D001104 ORTHO05D006624 2.0e-136 489.6 405 62.7
Medtr6g007040 Medicago truncatula HOM05D001104 ORTHO05D006624 2.7e-136 489.2 419 58.5
MD09G1032600 Malus domestica HOM05D001104 ORTHO05D006624 8.5e-135 484.2 445 57.8
Phvul.004G013700 Phaseolus vulgaris HOM05D001104 ORTHO05D006624 1.6e-133 479.9 426 57.7
Glyma.19G007900 Glycine max HOM05D001104 ORTHO05D006624 3.6e-133 478.8 427 57.4
Lsat_1_v5_gn_4_182480 Lactuca sativa HOM05D001104 ORTHO05D006624 8.0e-133 477.6 417 59.5
VMungo0464G0407 Vigna mungo HOM05D001104 ORTHO05D006624 8.0e-133 477.6 425 56.5
PGR142G0881 Punica granatum HOM05D001104 ORTHO05D006624 1.8e-132 476.5 429 57.6
Cfa007422 Carpinus fangiana HOM05D001104 ORTHO05D006624 2.3e-132 476.1 395 64.3
arahy.Tifrunner.gnm1.ann1.S5BZSG Arachis hypogaea HOM05D001104 ORTHO05D006624 6.8e-132 474.6 434 56.5
DCAR_011201 Daucus carota HOM05D001104 ORTHO05D006624 8.8e-132 474.2 400 60.2
Sp2g16980 Schrenkiella parvula HOM05D001104 ORTHO05D006624 8.3e-130 467.6 433 56.4
THA.LOC104825337 Tarenaya hassleriana HOM05D001104 ORTHO05D006624 4.1e-129 465.3 434 55.3
Rhsim08G0054100 Rhododendron simsii HOM05D001104 ORTHO05D006285 1.2e-128 463.8 347 68.9
BcaC06g30950 Brassica carinata HOM05D001104 ORTHO05D006624 3.5e-128 462.2 434 55.8
BcaC06g33770 Brassica carinata HOM05D001104 ORTHO05D006624 3.5e-128 462.2 433 56.4
C07p37130 Brassica napus HOM05D001104 ORTHO05D006624 3.5e-128 462.2 433 56.4
Lalb_Chr06g0176011 Lupinus albus HOM05D001104 ORTHO05D006624 3.5e-128 462.2 415 55.9
MBI16_g05636_MAGBIO Magnolia biondii HOM05D001104 ORTHO05D006624 1.0e-127 460.7 399 57.9
DCAR_015045 Daucus carota HOM05D001104 ORTHO05D006624 1.7e-127 459.9 457 53.2
Thhalv10004293m.g Eutrema salsugineum HOM05D001104 ORTHO05D006624 1.5e-126 456.8 432 56.5
unitig_899.g15491 Utricularia gibba HOM05D000928 ORTHO05D001186 3.6e-125 452.2 345 65.5
SGA_v2.0_scaffold135G34875 Striga asiatica HOM05D001104 ORTHO05D006624 5.2e-124 448.4 375 63.2
Lj2g0012499 Lotus japonicus HOM05D001104 ORTHO05D006624 2.6e-123 446.0 412 55.6
Gohir.D07G227400 Gossypium hirsutum HOM05D001104 ORTHO05D006624 5.7e-123 444.9 399 55.9
Carub.0005s0650 Capsella rubella HOM05D001104 ORTHO05D006624 9.8e-123 444.1 432 55.1
EL10Ac4g08579 Beta vulgaris HOM05D001104 ORTHO05D006624 1.7e-122 443.4 401 55.6
AT3G27930 Arabidopsis thaliana HOM05D001104 ORTHO05D006624 2.8e-122 442.6 423 54.8
ATR0730G148 Amborella trichopoda HOM05D001104 ORTHO05D006624 1.4e-121 440.3 422 53.6
AL5G17430 Arabidopsis lyrata HOM05D001104 ORTHO05D006624 4.1e-121 438.7 423 54.1
CARHR149500 Cardamine hirsuta HOM05D001104 ORTHO05D006624 2.0e-120 436.4 428 54.2
CSS0012459 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 5.0e-119 431.8 382 59.9
FAN02G3192 Fragaria x ananassa HOM05D001104 ORTHO05D006624 1.9e-118 429.9 488 48.6
Oeu043054.1 Olea europaea HOM05D001104 ORTHO05D006285 1.4e-113 413.7 384 58.1
CDE06G1183 Ceratophyllum demersum HOM05D001104 ORTHO05D006624 1.7e-111 406.8 402 52.2
Os05g0577800 Oryza sativa ssp. japonica HOM05D001104 ORTHO05D006624 4.3e-110 402.1 431 46.9
Manes.17G117000 Manihot esculenta HOM05D001104 ORTHO05D006624 4.0e-108 395.6 415 52.0
Aa31LG2G4840 Aethionema arabicum HOM05D001104 ORTHO05D006285 2.0e-107 393.3 386 54.1
Sc03g0007930 Simmondsia chinensis HOM05D001104 ORTHO05D006624 1.3e-103 380.6 347 56.2
AUR62043218 Chenopodium quinoa HOM05D001104 ORTHO05D006624 1.6e-101 373.6 341 57.8
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 8.9e-100 367.9 401 51.4
Psat1g057160 Pisum sativum HOM05D001104 ORTHO05D006624 3.9e-95 352.4 304 57.6
HPP92_024321 Vanilla planifolia HOM05D001104 ORTHO05D006285 3.3e-94 349.4 361 49.6
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 2.8e-93 346.3 395 50.1
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 1.8e-92 343.6 391 49.6
AUR62029365 Chenopodium quinoa HOM05D001104 ORTHO05D006624 2.7e-88 329.7 410 45.1
Os05g0577900 Oryza sativa ssp. japonica HOM05D001104 ORTHO05D006624 3.2e-81 306.2 427 40.0
AagrBONN_evm.TU.Sc2ySwM_340.221 Anthoceros agrestis HOM05D001104 ORTHO05D006624 1.3e-71 274.2 440 37.7
TPR.G2265 Trifolium pratense HOM05D001104 ORTHO05D006624 6.7e-71 271.9 196 65.3
A02p35680 Brassica napus HOM05D001104 ORTHO05D006624 1.5e-70 270.8 644 31.7
A06p40770 Brassica napus HOM05D001104 ORTHO05D006624 5.6e-70 268.9 291 51.2
BolC7t44224H Brassica oleracea HOM05D001104 ORTHO05D006624 9.6e-70 268.1 290 51.0
BraA06t26998Z Brassica rapa HOM05D001104 ORTHO05D006624 1.6e-69 267.3 290 51.0
BolC2t11515H Brassica oleracea HOM05D001104 ORTHO05D006624 1.4e-65 254.2 613 31.8
Hund10304 Selenicereus undatus HOM05D001104 ORTHO05D006624 3.2e-65 253.1 169 69.8
Pp3c25_9610 Physcomitrium patens HOM05D001104 ORTHO05D006624 1.2e-64 251.1 432 35.6
Zm00001eb344500 Zea mays HOM05D001104 ORTHO05D006624 4.3e-62 242.7 274 45.6
Cfa008567 Carpinus fangiana HOM05D001104 ORTHO05D006624 3.2e-57 226.5 145 77.2
Psat0s3401g0080 Pisum sativum HOM05D001104 ORTHO05D006624 9.7e-54 214.9 146 71.2
A06p40780 Brassica napus HOM05D001104 ORTHO05D006624 2.4e-44 183.7 127 68.5
BraA02t08570Z Brassica rapa HOM05D001104 ORTHO05D006624 9.4e-41 171.8 112 72.3
HanXRQChr06g0175561 Helianthus annuus HOM05D001104 ORTHO05D006624 2.1e-40 170.6 292 38.7
Oeu043225.1 Olea europaea HOM05D003428 ORTHO05D006624 5.2e-31 139.4 204 41.2
Oeu051906.1 Olea europaea HOM05D003428 ORTHO05D006624 1.5e-30 137.9 204 41.2
BolC2t11520H Brassica oleracea HOM05D001104 ORTHO05D006624 4.4e-30 136.3 324 33.6
Psat1g219520 Pisum sativum HOM05D001104 ORTHO05D006624 5.7e-30 136.0 124 59.7
BraA02t08571Z Brassica rapa HOM05D001104 ORTHO05D006624 1.3e-29 134.8 107 66.4
SEGI_13753 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 2.2e-29 134.0 149 47.7
Actinidia36089 Actinidia chinensis HOM05D001104 ORTHO05D006624 1.0e-26 125.2 286 35.7
Thecc.04G111800 Theobroma cacao HOM05D001104 ORTHO05D006624 2.7e-24 117.1 85 60.0
BcaB07g30139 Brassica carinata HOM05D001104 ORTHO05D006624 2.2e-18 97.4 69 73.9
SEGI_37884 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 7.5e-14 82.4 60 55.0
TPR.G18830 Trifolium pratense HOM05D001104 ORTHO05D006624 2.1e-08 64.3 44 65.9
Glyma.05G007402 Glycine max HOM05D001104 ORTHO05D006624 6.8e-07 59.3 81 46.9
Medtr6g007060 Medicago truncatula HOM05D001104 ORTHO05D006624 9.8e-06 55.5 42 52.4


User provided reference genes

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