Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001124g0120 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.1e-58 228.8 113 100.0
Nitab4.5_0001124g0110 Nicotiana tabacum HOM05D000862 ORTHO05D003588 6.1e-26 120.9 112 58.9
Peaxi162Scf00200g00051 Petunia axillaris HOM05D000862 ORTHO05D003588 2.0e-24 115.9 111 59.5
Peaxi162Scf01044g00232 Petunia axillaris HOM05D000862 ORTHO05D003588 2.2e-23 112.5 103 63.1
PGSC0003DMG400043196 Solanum tuberosum HOM05D000862 ORTHO05D003588 5.4e-22 107.8 106 54.7
CAN.G868.9 Capsicum annuum HOM05D000862 ORTHO05D003588 1.6e-21 106.3 111 53.2
Peaxi162Scf00062g01918 Petunia axillaris HOM05D000862 ORTHO05D003588 4.6e-21 104.8 93 61.3
CAN.G749.21 Capsicum annuum HOM05D000862 ORTHO05D003588 3.9e-20 101.7 106 54.7
CAN.G575.18 Capsicum annuum HOM05D000862 ORTHO05D003588 5.0e-20 101.3 101 58.4
CAN.G749.20 Capsicum annuum HOM05D000862 ORTHO05D003588 5.0e-20 101.3 106 50.9
Peaxi162Scf00285g00444 Petunia axillaris HOM05D000862 ORTHO05D003588 6.6e-20 100.9 93 58.1
Sopen09g031910 Solanum pennellii HOM05D000862 ORTHO05D003588 3.3e-19 98.6 109 53.2
Nitab4.5_0001124g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 9.5e-19 97.1 86 64.0
PGSC0003DMG400006098 Solanum tuberosum HOM05D000862 ORTHO05D003588 9.5e-19 97.1 107 49.5
PGSC0003DMG400040105 Solanum tuberosum HOM05D000862 ORTHO05D003588 9.5e-19 97.1 108 52.8
Nitab4.5_0001787g0070 Nicotiana tabacum HOM05D000862 ORTHO05D003588 4.7e-18 94.7 102 52.0
Solyc09g083040.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 8.0e-18 94.0 108 50.9
PGSC0003DMG400036830 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.1e-17 93.6 118 46.6
CAN.G749.17 Capsicum annuum HOM05D000002 ORTHO05D003588 1.8e-17 92.8 103 53.4
PGSC0003DMG400041018 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.8e-17 92.8 109 52.3
CAN.G749.18 Capsicum annuum HOM05D000862 ORTHO05D003588 2.3e-17 92.4 108 50.0
Nitab4.5_0009547g0010 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.3e-17 92.4 94 53.2
Peaxi162Scf00788g00215 Petunia axillaris HOM05D000862 ORTHO05D003588 3.1e-17 92.0 104 50.0
PGSC0003DMG400006100 Solanum tuberosum HOM05D000862 ORTHO05D003588 3.1e-17 92.0 103 50.5
PGSC0003DMG400041736 Solanum tuberosum HOM05D000862 ORTHO05D003588 3.1e-17 92.0 75 64.0
CAN.G749.24 Capsicum annuum HOM05D000862 ORTHO05D003588 4.0e-17 91.7 103 48.5
Dinv15179 Davidia involucrata HOM05D000862 ORTHO05D003588 8.9e-17 90.5 111 45.0
TAR636G2997 Trochodendron aralioides HOM05D000862 ORTHO05D003588 2.6e-16 89.0 111 45.9
Nitab4.5_0001568g0080 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.4e-16 88.6 96 51.0
Nitab4.5_0012347g0020 Nicotiana tabacum HOM05D000862 ORTHO05D003588 4.4e-16 88.2 90 55.6
TAR636G3530 Trochodendron aralioides HOM05D000862 ORTHO05D003588 5.8e-16 87.8 111 45.9
TAR636G1750 Trochodendron aralioides HOM05D000862 ORTHO05D003588 9.8e-16 87.0 91 51.6
Nitab4.5_0001787g0050 Nicotiana tabacum HOM05D000862 ORTHO05D003588 1.3e-15 86.7 89 55.1
Actinidia13361 Actinidia chinensis HOM05D000862 ORTHO05D003588 1.7e-15 86.3 96 47.9
CSS0042531 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 2.2e-15 85.9 92 52.2
Migut.N00044 Erythranthe guttata HOM05D000862 ORTHO05D003588 2.9e-15 85.5 92 48.9
Solyc09g083030.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 2.9e-15 85.5 94 50.0
Sopen09g031900 Solanum pennellii HOM05D000862 ORTHO05D003588 2.9e-15 85.5 94 50.0
CSS0041630 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 3.7e-15 85.1 92 52.2
TAR636G0912 Trochodendron aralioides HOM05D000862 ORTHO05D003588 3.7e-15 85.1 94 48.9
SGA_v2.0_scaffold480G52303 Striga asiatica HOM05D000862 ORTHO05D003588 6.4e-15 84.3 91 48.4
Nitab4.5_0000941g0010 Nicotiana tabacum HOM05D000862 ORTHO05D003588 8.3e-15 84.0 91 51.6
Dinv15178 Davidia involucrata HOM05D000862 ORTHO05D003588 1.4e-14 83.2 99 48.5
Peaxi162Scf00788g00022 Petunia axillaris HOM05D008029 ORTHO05D003588 1.4e-14 83.2 112 48.2
TAR636G1580 Trochodendron aralioides HOM05D000862 ORTHO05D003588 1.4e-14 83.2 89 51.7
Oeu040720.1 Olea europaea HOM05D000862 ORTHO05D003588 1.9e-14 82.8 93 47.3
CSS0039572 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 3.2e-14 82.0 114 45.6
CSS0029865 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 4.1e-14 81.6 119 42.9
CSS0034808 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 4.1e-14 81.6 119 42.9
Solyc09g083020.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 4.1e-14 81.6 94 47.9
TAR636G1248 Trochodendron aralioides HOM05D000862 ORTHO05D003588 4.1e-14 81.6 97 47.4
DCAR_026995 Daucus carota HOM05D000862 ORTHO05D003588 5.4e-14 81.3 95 44.2
Peaxi162Scf00441g00622 Petunia axillaris HOM05D000862 ORTHO05D003588 7.0e-14 80.9 93 48.4
MSTRG.21769 Avicennia marina HOM05D000862 ORTHO05D003588 2.7e-13 79.0 92 45.7
TAR636G2528 Trochodendron aralioides HOM05D000862 ORTHO05D003588 2.7e-13 79.0 89 49.4
Oeu016489.1 Olea europaea HOM05D007843 ORTHO05D003639 7.8e-13 77.4 91 46.2
CSS0022415 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 1.0e-12 77.0 108 44.4
vmacro08051 Vaccinium macrocarpon HOM05D000862 ORTHO05D003588 1.0e-12 77.0 91 51.6
CAN.G575.17 Capsicum annuum HOM05D000966 ORTHO05D002384 2.3e-12 75.9 107 46.7
Sopen09g031890 Solanum pennellii HOM05D000862 ORTHO05D003588 2.3e-12 75.9 89 47.2
Nitab4.5_0005132g0080 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.0e-12 75.5 91 44.0
Nitab4.5_0001787g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.9e-12 75.1 110 49.1
Nitab4.5_0000941g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 6.6e-12 74.3 115 45.2
TAR636G0218 Trochodendron aralioides HOM05D000862 ORTHO05D003588 6.6e-12 74.3 93 48.4
Aqoxy2G02742 Aquilegia oxysepala HOM05D000862 ORTHO05D003588 1.5e-11 73.2 99 42.4
MSTRG.21770 Avicennia marina HOM05D000862 ORTHO05D003588 1.5e-11 73.2 118 38.1
Rhsim04G0236000 Rhododendron simsii HOM05D000862 ORTHO05D003588 3.3e-11 72.0 110 40.9
TAR636G0883 Trochodendron aralioides HOM05D000862 ORTHO05D003588 3.3e-11 72.0 89 47.2
TAR636G1603 Trochodendron aralioides HOM05D000862 ORTHO05D003588 3.3e-11 72.0 91 44.0
Sp1g04570 Schrenkiella parvula HOM05D000862 ORTHO05D003588 4.3e-11 71.6 109 36.7
TAR636G0362 Trochodendron aralioides HOM05D000862 ORTHO05D003588 4.3e-11 71.6 91 45.1
Rhsim04G0236500 Rhododendron simsii HOM05D000862 ORTHO05D003588 5.6e-11 71.2 107 42.1
CAN.G11.36 Capsicum annuum HOM05D000862 ORTHO05D012081 7.3e-11 70.9 93 46.2
Thhalv10008892m.g Eutrema salsugineum HOM05D000862 ORTHO05D003588 7.3e-11 70.9 108 38.0
Rhsim04G0236200 Rhododendron simsii HOM05D000862 ORTHO05D003588 7.3e-11 70.9 106 40.6
Rhsim04G0238100 Rhododendron simsii HOM05D000862 ORTHO05D003588 7.3e-11 70.9 108 43.5
Carub.0001s0511 Capsella rubella HOM05D000862 ORTHO05D003588 9.5e-11 70.5 108 37.0
Rhsim02G0004300 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.2e-10 70.1 96 46.9
Rhsim04G0236800 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.2e-10 70.1 107 39.3
BcaC05g24342 Brassica carinata HOM05D000862 ORTHO05D003588 1.6e-10 69.7 110 36.4
Sc13g0005910 Simmondsia chinensis HOM05D000862 ORTHO05D003588 2.1e-10 69.3 93 47.3
TAR636G2022 Trochodendron aralioides HOM05D000862 ORTHO05D003588 2.1e-10 69.3 94 45.7
HanXRQChr12g0379721 Helianthus annuus HOM05D000862 ORTHO05D003588 2.8e-10 68.9 94 46.8
Potri.010G144900 Populus trichocarpa HOM05D008029 ORTHO05D003588 2.8e-10 68.9 93 43.0
AL1G15670 Arabidopsis lyrata HOM05D000862 ORTHO05D003588 3.6e-10 68.6 107 36.4
Peaxi162Scf00441g00620 Petunia axillaris HOM05D000862 ORTHO05D003588 6.2e-10 67.8 91 40.7
Rhsim04G0235700 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.2e-10 67.8 92 42.4
DCAR_011947 Daucus carota HOM05D000862 ORTHO05D003588 8.1e-10 67.4 91 44.0
AT1G05760 Arabidopsis thaliana HOM05D000862 ORTHO05D003588 1.1e-09 67.0 92 40.2
Rhsim02G0004100 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.1e-09 67.0 103 41.7
CARHR005280 Cardamine hirsuta HOM05D000862 ORTHO05D003588 1.4e-09 66.6 107 35.5
DCAR_003013 Daucus carota HOM05D000862 ORTHO05D003588 1.8e-09 66.2 90 37.8
Oeu019974.1 Olea europaea HOM05D000862 ORTHO05D003588 1.8e-09 66.2 105 40.0
THA.LOC104800920 Tarenaya hassleriana HOM05D008029 ORTHO05D003588 1.8e-09 66.2 92 41.3
vmacro08049 Vaccinium macrocarpon HOM05D000862 ORTHO05D003588 1.8e-09 66.2 93 40.9
DCAR_024495 Daucus carota HOM05D000075 ORTHO05D003588 2.3e-09 65.9 89 41.6
Lsat_1_v5_gn_6_18400 Lactuca sativa HOM05D000862 ORTHO05D003588 2.3e-09 65.9 104 39.4
Rhsim04G0235800 Rhododendron simsii HOM05D000862 ORTHO05D003588 4.0e-09 65.1 90 42.2
Rhsim04G0238300 Rhododendron simsii HOM05D000862 ORTHO05D003588 4.0e-09 65.1 90 42.2
Rhsim04G0237600 Rhododendron simsii HOM05D000862 ORTHO05D003588 5.2e-09 64.7 90 43.3
CARHR005260 Cardamine hirsuta HOM05D000862 ORTHO05D003588 6.8e-09 64.3 92 40.2
Dinv15175 Davidia involucrata HOM05D000862 ORTHO05D003588 6.8e-09 64.3 74 50.0
AUR62039285 Chenopodium quinoa HOM05D008029 ORTHO05D003588 8.9e-09 63.9 90 43.3
ECA233G3755 Erigeron canadensis HOM05D000862 ORTHO05D003588 8.9e-09 63.9 95 44.2
Rhsim04G0236900 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.2e-08 63.5 93 41.9
Lsat_1_v5_gn_6_16781 Lactuca sativa HOM05D000862 ORTHO05D003588 1.5e-08 63.2 83 43.4
THA.LOC104800921 Tarenaya hassleriana HOM05D008029 ORTHO05D003588 2.0e-08 62.8 98 37.8
AUR62016202 Chenopodium quinoa HOM05D008029 ORTHO05D003588 2.6e-08 62.4 90 43.3
Nitab4.5_0005132g0010 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.4e-08 62.0 94 38.3
AT1G05770 Arabidopsis thaliana HOM05D000862 ORTHO05D003588 4.4e-08 61.6 91 35.2
THA.LOC104800919 Tarenaya hassleriana HOM05D000862 ORTHO05D003588 4.4e-08 61.6 96 39.6
arahy.Tifrunner.gnm1.ann1.0CQZ6Z Arachis hypogaea HOM05D000862 ORTHO05D000003 5.8e-08 61.2 112 35.7
AUR62004914 Chenopodium quinoa HOM05D000862 ORTHO05D003588 5.8e-08 61.2 98 38.8
Nitab4.5_0000029g0100 Nicotiana tabacum HOM05D000862 ORTHO05D000943 5.8e-08 61.2 95 43.2
DCAR_026997 Daucus carota HOM05D000862 ORTHO05D003588 7.5e-08 60.8 98 35.7
Rhsim04G0238400 Rhododendron simsii HOM05D000862 ORTHO05D003588 7.5e-08 60.8 92 40.2
CAN.G140.49 Capsicum annuum HOM05D000862 ORTHO05D003588 9.9e-08 60.5 91 38.5
Ciclev10003362m.g Citrus clementina HOM05D000862 ORTHO05D000943 9.9e-08 60.5 90 41.1
Nitab4.5_0001568g0100 Nicotiana tabacum HOM05D000862 ORTHO05D003588 9.9e-08 60.5 94 38.3
RcHm_v2.0_Chr6g0301821 Rosa chinensis HOM05D000862 ORTHO05D000943 9.9e-08 60.5 91 41.8
TWI12G0321 Tripterygium wilfordii HOM05D000862 ORTHO05D000943 9.9e-08 60.5 99 39.4
PGSC0003DMG400032197 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.3e-07 60.1 91 39.6
BcaC05g24339 Brassica carinata HOM05D000862 ORTHO05D003588 1.7e-07 59.7 92 38.0
CAN.G422.1 Capsicum annuum HOM05D000862 ORTHO05D003588 1.7e-07 59.7 60 51.7
CAN.G960.45 Capsicum annuum HOM05D000862 ORTHO05D000943 1.7e-07 59.7 99 41.4
CiPaw.07G156100 Carya illinoinensis HOM05D000862 ORTHO05D000943 1.7e-07 59.7 97 41.2
Nitab4.5_0006269g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.7e-07 59.7 94 42.6
TWI56G0138 Tripterygium wilfordii HOM05D000862 ORTHO05D000943 2.2e-07 59.3 91 44.0
Ah.06g187570 Amaranthus hybridus HOM05D000056 ORTHO05D000019 2.9e-07 58.9 91 37.4
Sopen01g002240 Solanum pennellii HOM05D000862 ORTHO05D003588 2.9e-07 58.9 101 37.6
A10p04470 Brassica napus HOM05D000862 ORTHO05D003588 3.7e-07 58.5 92 37.0
C05p04080 Brassica napus HOM05D008029 ORTHO05D003588 3.7e-07 58.5 97 37.1
C05p04090 Brassica napus HOM05D000862 ORTHO05D003588 3.7e-07 58.5 92 37.0
BolC5t29188H Brassica oleracea HOM05D000862 ORTHO05D003588 3.7e-07 58.5 92 37.0
BraA10t42714Z Brassica rapa HOM05D000862 ORTHO05D003588 3.7e-07 58.5 92 37.0
AUR62004918 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.7e-07 58.5 91 37.4
Nitab4.5_0012347g0030 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.7e-07 58.5 110 32.7
AUR62001043 Chenopodium quinoa HOM05D000862 ORTHO05D003588 4.9e-07 58.2 98 37.8
Solyc01g006240.3 Solanum lycopersicum HOM05D000862 ORTHO05D003588 4.9e-07 58.2 100 36.0
Atru.chr13.392 Acer truncatum HOM05D000862 ORTHO05D000943 6.4e-07 57.8 101 37.6
arahy.Tifrunner.gnm1.ann1.R4H24K Arachis hypogaea HOM05D000862 ORTHO05D000003 6.4e-07 57.8 97 37.1
Atru.chr13.467 Acer truncatum HOM05D000862 ORTHO05D000943 8.3e-07 57.4 111 36.0
Ah.06g187560 Amaranthus hybridus HOM05D000056 ORTHO05D000019 8.3e-07 57.4 91 37.4
EL10Ac3g05502 Beta vulgaris HOM05D008029 ORTHO05D003588 8.3e-07 57.4 62 48.4
Cc10_g02350 Coffea canephora HOM05D000862 ORTHO05D000943 8.3e-07 57.4 93 41.9
CsaV3_2G029090 Cucumis sativus L. HOM05D000862 ORTHO05D000943 8.3e-07 57.4 104 37.5
Atru.chr13.391 Acer truncatum HOM05D000862 ORTHO05D000943 1.1e-06 57.0 91 39.6
Ah.04g156870 Amaranthus hybridus HOM05D008029 ORTHO05D003588 1.1e-06 57.0 92 32.6
CAN.G749.25 Capsicum annuum HOM05D000862 ORTHO05D003588 1.1e-06 57.0 71 47.9
MELO3C010973.2 Cucumis melo HOM05D000862 ORTHO05D000943 1.4e-06 56.6 112 37.5
FvH4_2g39220 Fragaria vesca HOM05D000862 ORTHO05D000943 1.4e-06 56.6 90 41.1
FAN15G3373 Fragaria x ananassa HOM05D000862 ORTHO05D000943 1.4e-06 56.6 90 41.1
Ciclev10000604m.g Citrus clementina HOM05D000862 ORTHO05D000943 1.9e-06 56.2 106 33.0
Thhalv10020232m.g Eutrema salsugineum HOM05D000956 ORTHO05D001930 1.9e-06 56.2 90 42.2
Ca_05614_v3 Cicer arietinum L. HOM05D000862 ORTHO05D000003 2.4e-06 55.8 105 32.4
CsaV3_3G045290 Cucumis sativus L. HOM05D000862 ORTHO05D000943 2.4e-06 55.8 92 40.2
Dinv39464 Davidia involucrata HOM05D000862 ORTHO05D000943 2.4e-06 55.8 91 38.5
Manes.18G021800 Manihot esculenta HOM05D000862 ORTHO05D000943 2.4e-06 55.8 92 39.1
Actinidia22511 Actinidia chinensis HOM05D000862 ORTHO05D000943 3.2e-06 55.5 98 39.8
FAN27G0829 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.2e-06 55.5 91 38.5
Oeu030604.1 Olea europaea HOM05D000862 ORTHO05D000943 3.2e-06 55.5 91 40.7
DCAR_026996 Daucus carota HOM05D000862 ORTHO05D003588 4.1e-06 55.1 95 36.8
Duzib093G0362 Durio zibethinus HOM05D000862 ORTHO05D000943 4.1e-06 55.1 91 42.9
TPR.G34586 Trifolium pratense HOM05D000862 ORTHO05D000943 4.1e-06 55.1 105 33.3
Dinv03894 Davidia involucrata HOM05D000862 ORTHO05D000943 5.4e-06 54.7 92 39.1
FvH4_3g35880 Fragaria vesca HOM05D000862 ORTHO05D000943 5.4e-06 54.7 91 39.6
Potri.005G232400 Populus trichocarpa HOM05D000862 ORTHO05D000943 5.4e-06 54.7 90 41.1
Sed0004054 Sechium edule HOM05D000862 ORTHO05D000943 5.4e-06 54.7 94 38.3
AT5G28520 Arabidopsis thaliana HOM05D000956 ORTHO05D001930 7.1e-06 54.3 90 35.6
Duzib151G0999 Durio zibethinus HOM05D000862 ORTHO05D003588 7.1e-06 54.3 108 34.3
Eucgr.I02393 Eucalyptus grandis HOM05D000862 ORTHO05D000943 7.1e-06 54.3 101 42.6
Thhalv10020712m.g Eutrema salsugineum HOM05D000956 ORTHO05D001930 9.2e-06 53.9 90 38.9
PSO675G6624 Papaver somniferum HOM05D000862 ORTHO05D000943 9.2e-06 53.9 91 35.2
Psat2g057640 Pisum sativum HOM05D000862 ORTHO05D000943 9.2e-06 53.9 105 32.4


User provided reference genes

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