Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.6e-295 1019.2 747 100.0
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.3e-253 878.6 748 85.6
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 5.0e-233 811.6 750 80.9
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 5.7e-229 798.1 749 86.6
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.5e-224 783.5 753 86.3
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 3.4e-197 692.6 661 85.9
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 2.0e-157 560.5 553 92.6
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 7.1e-147 525.4 677 74.7
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.6e-143 514.2 763 67.4
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 8.2e-143 511.9 669 64.4
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 3.1e-142 510.0 450 59.3
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 1.5e-141 507.7 753 58.2
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 2.5e-139 500.4 667 64.3
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 3.6e-138 496.5 749 66.0
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 1.4e-137 494.6 773 66.1
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.7e-135 487.6 657 73.2
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 2.8e-135 486.9 770 65.5
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 2.8e-135 486.9 772 65.2
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 4.8e-135 486.1 676 69.7
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 2.2e-132 477.2 758 65.2
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.4e-131 474.6 671 71.1
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 9.4e-131 471.9 674 70.0
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.2e-130 471.5 759 64.8
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 2.1e-130 470.7 751 65.5
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 7.9e-130 468.8 672 71.4
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 3.9e-129 466.5 759 58.2
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 3.3e-128 463.4 526 50.4
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 9.7e-128 461.8 754 65.1
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 4.8e-127 459.5 669 69.7
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 6.3e-127 459.1 754 65.1
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 8.2e-127 458.8 673 69.5
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.4e-126 457.2 532 56.6
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 3.1e-126 456.8 770 64.4
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 4.1e-126 456.4 532 56.4
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.5e-125 454.5 741 66.0
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 7.7e-125 452.2 678 70.4
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.8e-124 449.9 450 61.3
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 1.1e-123 448.4 589 74.4
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 2.5e-123 447.2 675 70.5
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 4.2e-123 446.4 665 65.9
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.5e-123 446.0 774 43.5
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.5e-123 446.0 774 43.5
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 1.2e-122 444.9 761 58.5
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.6e-122 444.5 459 61.2
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 6.1e-122 442.6 665 65.6
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 5.2e-121 439.5 462 62.6
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 6.7e-121 439.1 436 63.5
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 8.8e-121 438.7 438 62.6
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.5e-120 438.0 427 65.3
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.0e-120 437.6 367 71.1
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 2.6e-120 437.2 765 62.1
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 2.6e-120 437.2 440 62.3
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.6e-120 437.2 772 62.8
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.8e-119 433.7 787 55.7
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 1.4e-118 431.4 758 63.7
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.8e-118 431.0 535 53.5
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 3.1e-118 430.3 388 69.1
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 3.1e-118 430.3 648 69.8
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.6e-117 427.9 356 72.2
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 2.0e-117 427.6 539 55.8
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 2.6e-117 427.2 509 52.7
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 4.5e-117 426.4 356 68.8
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 3.8e-116 423.3 555 79.3
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 3.8e-116 423.3 517 56.3
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 6.5e-116 422.5 588 73.6
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.9e-115 421.0 433 62.6
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 4.2e-115 419.9 356 71.3
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 1.2e-114 418.3 540 80.6
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 1.2e-114 418.3 380 67.9
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 3.6e-114 416.8 372 67.2
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 3.6e-114 416.8 361 69.5
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 8.0e-114 415.6 366 69.9
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 2.3e-113 414.1 529 54.3
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 4.4e-112 409.8 354 65.5
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 4.4e-112 409.8 511 56.2
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 9.7e-112 408.7 508 55.3
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 1.7e-111 407.9 371 69.5
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 2.8e-111 407.1 359 70.2
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 6.3e-111 406.0 354 63.8
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 6.3e-111 406.0 536 52.2
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 6.3e-111 406.0 613 71.3
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 1.1e-110 405.2 661 66.9
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 5.3e-110 402.9 338 72.8
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 7.0e-110 402.5 589 73.0
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 4.5e-109 399.8 386 65.5
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 4.5e-109 399.8 367 66.5
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 8.5e-108 395.6 595 66.9
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 1.1e-107 395.2 384 65.4
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 7.2e-107 392.5 523 54.9
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 6.3e-103 379.4 413 58.8
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 1.4e-102 378.3 369 66.4
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 1.4e-102 378.3 369 66.4
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 2.4e-102 377.5 329 69.0
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 7.0e-102 375.9 367 66.8
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 2.0e-101 374.4 367 66.2
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 1.0e-100 372.1 369 66.1
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 2.3e-100 370.9 376 62.5
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.5e-99 367.5 353 62.9
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 4.2e-99 366.7 511 49.7
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 4.7e-98 363.2 440 57.3
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 8.0e-98 362.5 458 55.7
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 2.4e-78 297.7 526 46.4
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 4.7e-74 283.5 204 66.2
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 1.5e-72 278.5 367 45.5
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 7.8e-61 239.6 212 58.0
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 3.3e-51 207.6 298 43.3
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 1.5e-48 198.7 486 35.2
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 2.7e-45 188.0 377 43.2
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 2.8e-34 151.4 383 39.7
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 7.7e-24 116.7 168 37.5
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 1.3e-23 115.9 234 49.1
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 3.2e-22 111.3 141 45.4
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 7.9e-21 106.7 60 80.0
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.4e-17 95.9 67 64.2


User provided reference genes

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