Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001028g0100 Nicotiana tabacum HOM05D007833 ORTHO05D009855 4.1e-31 137.5 73 100.0
Nitab4.5_0014943g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 3.2e-28 127.9 73 95.9
PGSC0003DMG400001195 Solanum tuberosum HOM05D007833 ORTHO05D009855 2.4e-23 111.7 73 82.2
Nitab4.5_0008797g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 6.8e-18 93.6 74 68.9
Nitab4.5_0000759g0080 Nicotiana tabacum HOM05D007833 ORTHO05D009855 1.5e-17 92.4 74 68.9
Peaxi162Scf00570g00076 Petunia axillaris HOM05D007833 ORTHO05D009855 2.2e-16 88.6 72 65.3
Sopen06g035690 Solanum pennellii HOM05D007833 ORTHO05D009855 2.8e-16 88.2 68 70.6
Hma1.2p1_0628F.1_g192040 Hydrangea macrophylla HOM05D007833 ORTHO05D009855 3.7e-16 87.8 68 69.1
CAN.G1682.20 Capsicum annuum HOM05D007833 ORTHO05D009855 8.3e-16 86.7 76 61.8
Actinidia00743 Actinidia chinensis HOM05D002055 ORTHO05D002120 1.1e-15 86.3 61 72.1
CSS0012022 Camellia sinensis var. sinensis HOM05D007833 ORTHO05D009855 4.1e-15 84.3 58 75.9
Solyc06g084300.1 Solanum lycopersicum HOM05D007833 ORTHO05D009855 9.2e-15 83.2 68 67.6
PGSC0003DMG400020049 Solanum tuberosum HOM05D007833 ORTHO05D009855 1.2e-14 82.8 75 65.3
Rhsim13G0023900 Rhododendron simsii HOM05D007833 ORTHO05D009855 2.7e-14 81.6 49 81.6
vmacro02562 Vaccinium macrocarpon HOM05D007833 ORTHO05D009855 1.0e-13 79.7 67 67.2
Oeu028084.1 Olea europaea HOM05D007833 ORTHO05D009855 3.9e-13 77.8 58 65.5
Peaxi162Scf00783g00321 Petunia axillaris HOM05D007833 ORTHO05D009855 6.6e-13 77.0 63 71.4
ECA247G0823 Erigeron canadensis HOM05D007833 ORTHO05D009855 1.1e-12 76.3 52 73.1
FAN20G1309 Fragaria x ananassa HOM05D007833 ORTHO05D009855 7.3e-12 73.6 66 59.1
EL10Ac7g17570 Beta vulgaris HOM05D007833 ORTHO05D009855 9.5e-12 73.2 50 72.0
COL.COLO4_09117 Corchorus olitorius HOM05D003232 ORTHO05D003584 1.2e-11 72.8 52 65.4
AUR62036454 Chenopodium quinoa HOM05D007833 ORTHO05D009855 2.1e-11 72.0 64 57.8
Manes.01G208800 Manihot esculenta HOM05D007833 ORTHO05D009855 2.1e-11 72.0 59 64.4
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 2.8e-11 71.6 62 62.9
Thecc.01G281600 Theobroma cacao HOM05D007833 ORTHO05D009855 2.8e-11 71.6 50 70.0
Cc01_g19620 Coffea canephora HOM05D007833 ORTHO05D009855 4.7e-11 70.9 50 66.0
Lsat_1_v5_gn_9_4081 Lactuca sativa HOM05D007833 ORTHO05D009855 4.7e-11 70.9 73 58.9
Sp5g09880 Schrenkiella parvula HOM05D007833 ORTHO05D009855 4.7e-11 70.9 56 60.7
CARHR162190 Cardamine hirsuta HOM05D007833 ORTHO05D009855 6.1e-11 70.5 52 63.5
FvH4_2g23750 Fragaria vesca HOM05D007833 ORTHO05D009855 6.1e-11 70.5 64 57.8
FAN24G2170 Fragaria x ananassa HOM05D007833 ORTHO05D009855 6.1e-11 70.5 64 57.8
RcHm_v2.0_Chr6g0291241 Rosa chinensis HOM05D007833 ORTHO05D009855 6.1e-11 70.5 65 56.9
Ah.04g166580 Amaranthus hybridus HOM05D007833 ORTHO05D009855 8.0e-11 70.1 50 70.0
Duzib133G1414 Durio zibethinus HOM05D007833 ORTHO05D009855 8.0e-11 70.1 50 66.0
BcaC06g32911 Brassica carinata HOM05D007833 ORTHO05D009855 1.0e-10 69.7 56 58.9
BcaC06g33387 Brassica carinata HOM05D007833 ORTHO05D009855 1.0e-10 69.7 56 58.9
C07p46950 Brassica napus HOM05D000938 ORTHO05D001451 1.0e-10 69.7 56 58.9
BolC7t45211H Brassica oleracea HOM05D000938 ORTHO05D001451 1.0e-10 69.7 56 58.9
AUR62017101 Chenopodium quinoa HOM05D007833 ORTHO05D009855 1.0e-10 69.7 51 62.7
Potri.005G208100 Populus trichocarpa HOM05D007833 ORTHO05D009855 1.0e-10 69.7 53 66.0
Gorai.004G081500 Gossypium raimondii HOM05D007833 ORTHO05D009855 1.4e-10 69.3 52 63.5
MBI04_g33966_MAGBIO Magnolia biondii HOM05D007833 ORTHO05D009855 1.8e-10 68.9 57 59.6
MD11G1287600 Malus domestica HOM05D007833 ORTHO05D009855 1.8e-10 68.9 52 65.4
Gohir.D08G076800 Gossypium hirsutum HOM05D007833 ORTHO05D009855 2.3e-10 68.6 52 63.5
Nn1g02183 Nelumbo nucifera HOM05D007833 ORTHO05D009855 3.1e-10 68.2 47 72.3
AT3G52420 Arabidopsis thaliana HOM05D007833 ORTHO05D009855 4.0e-10 67.8 52 61.5
A03p48860 Brassica napus HOM05D000938 ORTHO05D001451 4.0e-10 67.8 56 57.1
BraA03t13987Z Brassica rapa HOM05D000938 ORTHO05D001451 4.0e-10 67.8 56 57.1
Dinv11245 Davidia involucrata HOM05D003232 ORTHO05D003584 4.0e-10 67.8 65 56.9
Gohir.A08G068400 Gossypium hirsutum HOM05D007833 ORTHO05D009855 4.0e-10 67.8 52 61.5
AL5G33070 Arabidopsis lyrata HOM05D007833 ORTHO05D009855 5.2e-10 67.4 52 63.5
Prupe.8G242800 Prunus persica HOM05D007833 ORTHO05D009855 5.2e-10 67.4 52 61.5
TWI59G0429 Tripterygium wilfordii HOM05D007833 ORTHO05D009855 8.9e-10 66.6 52 63.5
Sc24g0003060 Simmondsia chinensis HOM05D007833 ORTHO05D009855 1.2e-09 66.2 63 57.1
Haze_04727 Corylus avellana HOM05D001305 ORTHO05D007147 1.5e-09 65.9 62 59.7
QL12p022146 Quercus lobata HOM05D007833 ORTHO05D009855 1.5e-09 65.9 66 56.1
Carub.0005s1877 Capsella rubella HOM05D007833 ORTHO05D009855 2.0e-09 65.5 63 55.6
Atru.chr5.1399 Acer truncatum HOM05D007833 ORTHO05D009855 2.6e-09 65.1 65 53.8
ClCG07G000180 Citrullus lanatus HOM05D007833 ORTHO05D009855 2.6e-09 65.1 56 62.5
TAR365G0564 Trochodendron aralioides HOM05D007833 ORTHO05D009855 2.6e-09 65.1 66 56.1
Ciclev10023167m.g Citrus clementina HOM05D007833 ORTHO05D009855 4.4e-09 64.3 50 64.0
Eucgr.K03378 Eucalyptus grandis HOM05D007833 ORTHO05D009855 4.4e-09 64.3 55 61.8
CANSAT25G0416 Cannabis sativa HOM05D007833 ORTHO05D009855 7.5e-09 63.5 50 62.0
CiPaw.07G092800 Carya illinoinensis HOM05D007833 ORTHO05D009855 7.5e-09 63.5 58 60.3
Duzib138G0003 Durio zibethinus HOM05D007833 ORTHO05D009855 9.8e-09 63.2 46 65.2
Cfa006126 Carpinus fangiana HOM05D007833 ORTHO05D009855 1.3e-08 62.8 62 58.1
MD03G1267100 Malus domestica HOM05D007833 ORTHO05D009855 1.3e-08 62.8 62 58.1
Potri.002G054700 Populus trichocarpa HOM05D007833 ORTHO05D009855 1.7e-08 62.4 60 58.3
Glyma.19G154700 Glycine max HOM05D007833 ORTHO05D009855 2.2e-08 62.0 43 69.8
Nn4g26217 Nelumbo nucifera HOM05D007833 ORTHO05D009855 2.9e-08 61.6 50 60.0
Sed0020364 Sechium edule HOM05D007833 ORTHO05D009855 2.9e-08 61.6 48 60.4
Phvul.001G149800 Phaseolus vulgaris HOM05D007833 ORTHO05D009855 3.7e-08 61.2 55 60.0
SalBow6G6192 Salvia bowleyana HOM05D007833 ORTHO05D009855 3.7e-08 61.2 52 63.5
Glyma.17G209300 Glycine max HOM05D007833 ORTHO05D009855 4.9e-08 60.8 43 69.8
Ca_08575_v3 Cicer arietinum L. HOM05D007833 ORTHO05D009855 1.1e-07 59.7 52 59.6
CsaV3_6G037060 Cucumis sativus L. HOM05D007833 ORTHO05D009855 1.1e-07 59.7 57 56.1
Thhalv10010886m.g Eutrema salsugineum HOM05D007833 ORTHO05D009855 1.1e-07 59.7 45 64.4
Migut.N02161 Erythranthe guttata HOM05D007833 ORTHO05D009855 1.4e-07 59.3 62 53.2
Glyma.03G152200 Glycine max HOM05D007833 ORTHO05D009855 1.4e-07 59.3 43 67.4
Lj1g0020293 Lotus japonicus HOM05D007833 ORTHO05D009855 1.9e-07 58.9 43 65.1
Psat3g064960 Pisum sativum HOM05D007833 ORTHO05D009855 1.9e-07 58.9 49 59.2
Cpa.g.sc52.17 Carica papaya HOM05D007833 ORTHO05D009855 2.4e-07 58.5 51 56.9
HPP92_007464 Vanilla planifolia HOM05D027844 ORTHO05D009855 2.4e-07 58.5 51 54.9
Medtr7g094710 Medicago truncatula HOM05D007833 ORTHO05D009855 9.2e-07 56.6 43 62.8
PGR044G2487 Punica granatum HOM05D007833 ORTHO05D009855 2.0e-06 55.5 37 67.6
Migut.K01062 Erythranthe guttata HOM05D007833 ORTHO05D009855 2.7e-06 55.1 44 61.4
arahy.Tifrunner.gnm1.ann1.1H9ESI Arachis hypogaea HOM05D007833 ORTHO05D009855 3.5e-06 54.7 60 51.7
TPR.G26603 Trifolium pratense HOM05D007833 ORTHO05D009855 3.5e-06 54.7 43 60.5
Potri.017G127350 Populus trichocarpa HOM05D007833 ORTHO05D009855 6.0e-06 53.9 49 59.2


User provided reference genes

Program Settings