Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 3.9e-103 378.6 269 100.0
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 3.6e-101 372.1 269 98.9
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 4.2e-89 332.0 270 91.9
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 5.5e-89 331.6 270 90.4
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 3.5e-88 328.9 270 92.6
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 3.0e-87 325.9 269 89.6
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 4.3e-86 322.0 270 91.5
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 1.4e-73 280.4 273 80.6
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 9.3e-73 277.7 278 79.9
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 1.3e-71 273.9 284 78.2
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 1.3e-71 273.9 273 80.6
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 1.6e-69 266.9 271 78.6
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 3.1e-68 262.7 272 80.1
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 4.1e-68 262.3 271 79.7
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 9.1e-68 261.2 273 78.4
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 2.0e-67 260.0 272 78.3
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 2.0e-67 260.0 273 68.5
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 3.4e-67 259.2 284 76.4
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 4.5e-67 258.8 286 74.1
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 2.2e-66 256.5 278 77.0
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 3.8e-66 255.8 259 81.1
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 6.5e-66 255.0 287 75.6
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 5.5e-65 251.9 269 77.0
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 5.5e-65 251.9 269 77.0
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 5.5e-65 251.9 273 77.7
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 5.5e-65 251.9 272 76.8
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 1.2e-64 250.8 281 76.9
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 1.2e-64 250.8 272 77.2
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 1.6e-64 250.4 286 73.8
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 2.1e-64 250.0 284 69.7
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 3.6e-64 249.2 287 73.9
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 6.1e-64 248.4 284 74.6
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 6.1e-64 248.4 283 71.0
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 6.1e-64 248.4 270 75.9
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 7.9e-64 248.1 280 75.4
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 7.9e-64 248.1 281 74.7
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 1.0e-63 247.7 280 75.4
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 1.0e-63 247.7 280 76.4
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 1.0e-63 247.7 289 73.0
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 1.4e-63 247.3 280 75.4
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 1.4e-63 247.3 256 63.7
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 1.8e-63 246.9 283 72.8
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 2.3e-63 246.5 277 75.5
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 3.0e-63 246.1 280 75.0
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 3.0e-63 246.1 281 75.1
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 3.9e-63 245.7 281 74.0
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 3.9e-63 245.7 283 73.5
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 5.1e-63 245.4 280 76.4
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 1.1e-62 244.2 284 73.6
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 1.1e-62 244.2 314 49.4
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 1.5e-62 243.8 292 66.8
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 2.0e-62 243.4 285 71.2
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 2.6e-62 243.0 278 74.1
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 3.3e-62 242.7 284 73.9
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 3.3e-62 242.7 220 87.3
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 5.7e-62 241.9 269 64.7
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 7.4e-62 241.5 285 68.1
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 7.4e-62 241.5 309 68.9
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 9.7e-62 241.1 284 74.6
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 1.3e-61 240.7 270 76.7
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 1.3e-61 240.7 247 78.9
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 2.8e-61 239.6 286 71.0
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 4.8e-61 238.8 285 74.7
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 8.2e-61 238.0 275 74.5
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 8.2e-61 238.0 285 63.9
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 1.8e-60 236.9 289 61.9
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 2.4e-60 236.5 284 73.6
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 4.1e-60 235.7 272 74.3
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 6.9e-60 235.0 276 72.1
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 9.1e-60 234.6 275 72.0
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 2.6e-59 233.0 297 71.0
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 2.6e-59 233.0 297 71.0
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 1.3e-58 230.7 221 86.0
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 2.2e-58 229.9 281 73.0
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 2.9e-58 229.6 275 59.6
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 1.6e-56 223.8 196 90.8
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 1.6e-56 223.8 215 74.4
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.6e-56 223.8 244 77.9
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 4.7e-56 222.2 196 87.8
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 2.3e-55 219.9 283 71.7
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 5.2e-55 218.8 254 56.7
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 1.4e-52 210.7 368 43.5
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 7.7e-51 204.9 263 60.1
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 1.1e-49 201.1 193 75.6
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.8e-47 193.7 182 84.1
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 1.5e-46 190.7 216 63.4
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 2.6e-46 189.9 212 64.6
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 2.2e-45 186.8 208 76.0
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 6.5e-42 175.3 217 55.3
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 4.2e-41 172.6 237 48.9
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 1.8e-39 167.2 88 89.8
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 8.8e-39 164.9 90 87.8
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 2.6e-38 163.3 88 88.6
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 9.8e-38 161.4 85 89.4
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 1.7e-37 160.6 85 90.6
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 1.8e-36 157.1 85 89.4
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 2.4e-36 156.8 90 84.4
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 2.4e-36 156.8 90 84.4
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 8.6e-34 148.3 186 54.8
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 1.6e-32 144.1 214 73.4
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 2.5e-25 120.2 234 55.6
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 9.5e-25 118.2 110 61.8
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 3.6e-24 116.3 143 60.1
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 3.6e-24 116.3 207 70.0
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 1.0e-23 114.8 121 56.2
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 2.4e-20 103.6 68 76.5
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 1.2e-19 101.3 59 86.4
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 5.2e-15 85.9 53 77.4
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 1.5e-14 84.3 200 45.0
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 5.8e-14 82.4 45 86.7
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 3.2e-12 76.6 90 53.3
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 4.6e-11 72.8 44 77.3
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.6e-08 64.3 40 77.5
MCO04G309 Micromonas commoda HOM05D007062 ORTHO05D008941 1.8e-07 60.8 53 58.5


User provided reference genes

Program Settings